RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-231ENST00000467435 SMARCD1Q96GM5 515 aa12.91□□□□□ -0.34
HDLBP-231ENST00000467435 CASD1Q96PB1 797 aa12.91□□□□□ -0.34
HDLBP-231ENST00000467435 HINFPQ9BQA5 517 aa12.91□□□□□ -0.34
HDLBP-231ENST00000467435 ACBD6Q9BR61 282 aa12.91□□□□□ -0.34
HDLBP-231ENST00000467435 HERPUD2Q9BSE4 406 aa12.91□□□□□ -0.34
HDLBP-231ENST00000467435 OSBPL8Q9BZF1 889 aa12.91□□□□□ -0.34
HDLBP-231ENST00000467435 ZWILCHQ9H900 591 aa12.91□□□□□ -0.34
HDLBP-231ENST00000467435 LRRC4Q9HBW1 653 aa12.91□□□□□ -0.34
HDLBP-231ENST00000467435 GDF3Q9NR23 364 aa12.91□□□□□ -0.34
HDLBP-231ENST00000467435 DNAJB4Q9UDY4 337 aa12.91□□□□□ -0.34
HDLBP-231ENST00000467435 TBX21Q9UL17 535 aa12.91□□□□□ -0.34
HDLBP-231ENST00000467435 ESYT3A0FGR9 886 aa12.9□□□□□ -0.34
HDLBP-231ENST00000467435 LRRD1A4D1F6 860 aa12.9□□□□□ -0.34
HDLBP-231ENST00000467435 ZSCAN5CA6NGD5 496 aaPredicted RBP12.9□□□□□ -0.34
HDLBP-231ENST00000467435 PI4K2BG5E9Z4 385 aa12.9□□□□□ -0.34
HDLBP-231ENST00000467435 TTI1O43156 1089 aa12.9□□□□□ -0.34
HDLBP-231ENST00000467435 BEST1O76090 585 aa12.9□□□□□ -0.34
HDLBP-231ENST00000467435 CLTBP09497 229 aa12.9□□□□□ -0.34
HDLBP-231ENST00000467435 MYBL2P10244 700 aa12.9□□□□□ -0.34
HDLBP-231ENST00000467435 MIPP30301 263 aa12.9□□□□□ -0.34
HDLBP-231ENST00000467435 PCK1P35558 622 aa12.9□□□□□ -0.34
HDLBP-231ENST00000467435 GJA8P48165 433 aa12.9□□□□□ -0.34
HDLBP-231ENST00000467435 MAP3K7CLP57077 242 aa12.9□□□□□ -0.34
HDLBP-231ENST00000467435 TSPY1Q01534 308 aa12.9□□□□□ -0.34
HDLBP-231ENST00000467435 DR1Q01658 176 aa12.9□□□□□ -0.34
HDLBP-231ENST00000467435 YWHAHQ04917 246 aaPredicted RBP12.9□□□□□ -0.34
HDLBP-231ENST00000467435 DHX34Q14147 1143 aaKnown RBP12.9□□□□□ -0.34
HDLBP-231ENST00000467435 TAF5Q15542 800 aa12.9□□□□□ -0.34
HDLBP-231ENST00000467435 CDO1Q16878 200 aa12.9□□□□□ -0.34
HDLBP-231ENST00000467435 C15orf59Q2T9L4 293 aaPredicted RBP12.9□□□□□ -0.34
HDLBP-231ENST00000467435 SMTNL2Q2TAL5 461 aa12.9□□□□□ -0.34
HDLBP-231ENST00000467435 ATP13A4Q4VNC1 1196 aa12.9□□□□□ -0.34
HDLBP-231ENST00000467435 BEND6Q5SZJ8 279 aaPredicted RBP12.9□□□□□ -0.34
HDLBP-231ENST00000467435 CCNI2Q6ZMN8 369 aaPredicted RBP12.9□□□□□ -0.34
HDLBP-231ENST00000467435 SPOCD1Q6ZMY3 1216 aa12.9□□□□□ -0.34
HDLBP-231ENST00000467435 MAATS1Q7Z4T9 603 aa12.9□□□□□ -0.34
HDLBP-231ENST00000467435 SIX6OS1Q8N1H7 587 aa12.9□□□□□ -0.34
HDLBP-231ENST00000467435 OR10T2Q8NGX3 314 aa12.9□□□□□ -0.34
HDLBP-231ENST00000467435 CFAP57Q96MR6 1250 aa12.9□□□□□ -0.34
HDLBP-231ENST00000467435 RUNDC3BQ96NL0 473 aa12.9□□□□□ -0.34
HDLBP-231ENST00000467435 PKMYT1Q99640 499 aa12.9□□□□□ -0.34
HDLBP-231ENST00000467435 MRPL9Q9BYD2 267 aaKnown RBP12.9□□□□□ -0.34
HDLBP-231ENST00000467435 C11orf49Q9H6J7 331 aa12.9□□□□□ -0.34
HDLBP-231ENST00000467435 NRDE2Q9H7Z3 1164 aa12.9□□□□□ -0.34
HDLBP-231ENST00000467435 EPB41L5Q9HCM4 733 aa12.9□□□□□ -0.34
HDLBP-231ENST00000467435 COL4A6Q14031 1691 aa12.89□□□□□ -0.35
HDLBP-231ENST00000467435 FAM187AA6NFU0 413 aa12.89□□□□□ -0.35
HDLBP-231ENST00000467435 HSF2BPO75031 334 aa12.89□□□□□ -0.35
HDLBP-231ENST00000467435 DAB1O75553 588 aa12.89□□□□□ -0.35
HDLBP-231ENST00000467435 TRUB2O95900 331 aaKnown RBP12.89□□□□□ -0.35
HDLBP-231ENST00000467435 IL1R2P27930 398 aa12.89□□□□□ -0.35
HDLBP-231ENST00000467435 PTPN7P35236 360 aa12.89□□□□□ -0.35
HDLBP-231ENST00000467435 PTPN9P43378 593 aa12.89□□□□□ -0.35
HDLBP-231ENST00000467435 FNTAP49354 379 aa12.89□□□□□ -0.35
HDLBP-231ENST00000467435 CDR1P51861 262 aa12.89□□□□□ -0.35
HDLBP-231ENST00000467435 CACNA2D1P54289 1103 aa12.89□□□□□ -0.35
HDLBP-231ENST00000467435 COPS2P61201 443 aa12.89□□□□□ -0.35
HDLBP-231ENST00000467435 ATP11AP98196 1134 aa12.89□□□□□ -0.35
HDLBP-231ENST00000467435 ADCY1Q08828 1119 aa12.89□□□□□ -0.35
HDLBP-231ENST00000467435 KLF1Q13351 362 aaPredicted RBP12.89□□□□□ -0.35
HDLBP-231ENST00000467435 MAPRE1Q15691 268 aaKnown RBP12.89□□□□□ -0.35
HDLBP-231ENST00000467435 PKN2Q16513 984 aaKnown RBP12.89□□□□□ -0.35
HDLBP-231ENST00000467435 CCDC14Q49A88 953 aa12.89□□□□□ -0.35
HDLBP-231ENST00000467435 EFHC1Q5JVL4 640 aa12.89□□□□□ -0.35
HDLBP-231ENST00000467435 TTC27Q6P3X3 843 aa12.89□□□□□ -0.35
HDLBP-231ENST00000467435 FAM171BQ6P995 826 aa12.89□□□□□ -0.35
HDLBP-231ENST00000467435 CNKSR3Q6P9H4 555 aa12.89□□□□□ -0.35
HDLBP-231ENST00000467435 CCDC137Q6PK04 289 aaKnown RBP12.89□□□□□ -0.35
HDLBP-231ENST00000467435 MFSD7Q6UXD7 560 aa12.89□□□□□ -0.35
HDLBP-231ENST00000467435 ANKS1BQ7Z6G8 1248 aa12.89□□□□□ -0.35
HDLBP-231ENST00000467435 DNAJC5GQ8N7S2 189 aa12.89□□□□□ -0.35
HDLBP-231ENST00000467435 ZMIZ2Q8NF64 920 aa12.89□□□□□ -0.35
HDLBP-231ENST00000467435 FAM172AQ8WUF8 416 aa12.89□□□□□ -0.35
HDLBP-231ENST00000467435 CASKIN2Q8WXE0 1202 aa12.89□□□□□ -0.35
HDLBP-231ENST00000467435 RAPGEF5Q92565 580 aa12.89□□□□□ -0.35
HDLBP-231ENST00000467435 KHSRPQ92945 711 aaKnown RBP eCLIP12.89□□□□□ -0.351e-15■■■■□ 26.7
HDLBP-231ENST00000467435 PEBP4Q96S96 227 aa12.89□□□□□ -0.35
HDLBP-231ENST00000467435 TMEM209Q96SK2 561 aa12.89□□□□□ -0.35
HDLBP-231ENST00000467435 SMOQ99835 787 aa12.89□□□□□ -0.35
HDLBP-231ENST00000467435 TRIM51Q9BSJ1 452 aa12.89□□□□□ -0.35
HDLBP-231ENST00000467435 HEMGNQ9BXL5 484 aa12.89□□□□□ -0.35
HDLBP-231ENST00000467435 RAB17Q9H0T7 212 aa12.89□□□□□ -0.35
HDLBP-231ENST00000467435 NGRNQ9NPE2 291 aaKnown RBP12.89□□□□□ -0.35
HDLBP-231ENST00000467435 TMEM39AQ9NV64 488 aa12.89□□□□□ -0.35
HDLBP-231ENST00000467435 PCSK1NQ9UHG2 260 aa12.89□□□□□ -0.35
HDLBP-231ENST00000467435 PCYOX1Q9UHG3 505 aa12.89□□□□□ -0.35
HDLBP-231ENST00000467435 RASAL2Q9UJF2 1139 aa12.89□□□□□ -0.35
HDLBP-231ENST00000467435 USP18Q9UMW8 372 aa12.89□□□□□ -0.35
HDLBP-231ENST00000467435 KIAA1671Q9BY89 1806 aa12.89□□□□□ -0.35
HDLBP-231ENST00000467435 COL4A4P53420 1690 aaPredicted RBP12.89□□□□□ -0.35
HDLBP-231ENST00000467435 PLXNA3P51805 1871 aa12.89□□□□□ -0.35
HDLBP-231ENST00000467435 PTPRSQ13332 1948 aa12.88□□□□□ -0.35
HDLBP-231ENST00000467435 hCG_1818297A0A087WSY0 165 aa12.88□□□□□ -0.35
HDLBP-231ENST00000467435 TBKBP1A7MCY6 615 aa12.88□□□□□ -0.35
HDLBP-231ENST00000467435 BHMG1C9JSJ3 638 aaPredicted RBP12.88□□□□□ -0.35
HDLBP-231ENST00000467435 NRP1O14786 923 aa12.88□□□□□ -0.35
HDLBP-231ENST00000467435 TRAPPC3O43617 180 aa12.88□□□□□ -0.35
HDLBP-231ENST00000467435 PRPSAP2O60256 369 aa12.88□□□□□ -0.35
HDLBP-231ENST00000467435 TADA2AO75478 443 aa12.88□□□□□ -0.35
HDLBP-231ENST00000467435 FBXO21O94952 628 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms