RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 RIC8AQ9NPQ8 531 aa4.76□□□□□ -1.65
VPS13A-209ENST00000467124 FSCN3Q9NQT6 498 aa4.76□□□□□ -1.65
VPS13A-209ENST00000467124 MAP3K20Q9NYL2 800 aaKnown RBP4.76□□□□□ -1.65
VPS13A-209ENST00000467124 KIF17Q9P2E2 1029 aa4.76□□□□□ -1.65
VPS13A-209ENST00000467124 HERC5Q9UII4 1024 aaKnown RBP4.76□□□□□ -1.65
VPS13A-209ENST00000467124 DTNAQ9Y4J8 743 aa4.76□□□□□ -1.65
VPS13A-209ENST00000467124 SNX14Q9Y5W7 946 aa4.76□□□□□ -1.65
VPS13A-209ENST00000467124 KRTAP23-1A1A580 65 aa4.75□□□□□ -1.65
VPS13A-209ENST00000467124 AHRRA9YTQ3 701 aa4.75□□□□□ -1.65
VPS13A-209ENST00000467124 ADM5C9JUS6 153 aa4.75□□□□□ -1.65
VPS13A-209ENST00000467124 E7ENX8 843 aa4.75□□□□□ -1.65
VPS13A-209ENST00000467124 PPM1DO15297 605 aa4.75□□□□□ -1.65
VPS13A-209ENST00000467124 CD3EAPO15446 510 aaKnown RBP4.75□□□□□ -1.65
VPS13A-209ENST00000467124 EPB41L2O43491 1005 aaKnown RBP4.75□□□□□ -1.65
VPS13A-209ENST00000467124 CCNT2O60583 730 aaKnown RBP4.75□□□□□ -1.65
VPS13A-209ENST00000467124 HIBADHP31937 336 aaKnown RBP4.75□□□□□ -1.65
VPS13A-209ENST00000467124 TUBP50607 506 aa4.75□□□□□ -1.65
VPS13A-209ENST00000467124 PGDP52209 483 aa4.75□□□□□ -1.65
VPS13A-209ENST00000467124 GEMIN4P57678 1058 aaKnown RBP4.75□□□□□ -1.65
VPS13A-209ENST00000467124 AP2B1P63010 937 aa4.75□□□□□ -1.65
VPS13A-209ENST00000467124 TAP2Q03519 686 aa4.75□□□□□ -1.65
VPS13A-209ENST00000467124 SCAPQ12770 1279 aa4.75□□□□□ -1.65
VPS13A-209ENST00000467124 B3GNTL1Q67FW5 361 aaPredicted RBP4.75□□□□□ -1.65
VPS13A-209ENST00000467124 SYNE3Q6ZMZ3 975 aa4.75□□□□□ -1.65
VPS13A-209ENST00000467124 LRRC55Q6ZSA7 311 aa4.75□□□□□ -1.65
VPS13A-209ENST00000467124 Q6ZSN1 163 aa4.75□□□□□ -1.65
VPS13A-209ENST00000467124 CLNKQ7Z7G1 428 aa4.75□□□□□ -1.65
VPS13A-209ENST00000467124 CPOQ8IVL8 374 aa4.75□□□□□ -1.65
VPS13A-209ENST00000467124 Q8NA96 180 aa4.75□□□□□ -1.65
VPS13A-209ENST00000467124 ZNF384Q8TF68 577 aa4.75□□□□□ -1.65
VPS13A-209ENST00000467124 GOLGA1Q92805 767 aa4.75□□□□□ -1.65
VPS13A-209ENST00000467124 C3orf49Q96BT1 292 aa4.75□□□□□ -1.65
VPS13A-209ENST00000467124 HIST1H2AAQ96QV6 131 aa4.75□□□□□ -1.65
VPS13A-209ENST00000467124 RBM15Q96T37 977 aaKnown RBP eCLIP4.75□□□□□ -1.65
VPS13A-209ENST00000467124 RTKNQ9BST9 563 aa4.75□□□□□ -1.65
VPS13A-209ENST00000467124 ZHX3Q9H4I2 956 aa4.75□□□□□ -1.65
VPS13A-209ENST00000467124 SMC4Q9NTJ3 1288 aa4.75□□□□□ -1.65
VPS13A-209ENST00000467124 TERF2IPQ9NYB0 399 aa4.75□□□□□ -1.65
VPS13A-209ENST00000467124 TMOD4Q9NZQ9 345 aa4.75□□□□□ -1.65
VPS13A-209ENST00000467124 RNF181Q9P0P0 153 aa4.75□□□□□ -1.65
VPS13A-209ENST00000467124 CAPN11Q9UMQ6 739 aa4.75□□□□□ -1.65
VPS13A-209ENST00000467124 JAG2Q9Y219 1238 aa4.75□□□□□ -1.65
VPS13A-209ENST00000467124 SSX2IPQ9Y2D8 614 aa4.75□□□□□ -1.65
VPS13A-209ENST00000467124 TCAF1Q9Y4C2 921 aa4.75□□□□□ -1.65
VPS13A-209ENST00000467124 PNMA6EA0A0J9YXQ4 647 aa4.74□□□□□ -1.65
VPS13A-209ENST00000467124 GAGE12BA1L429 117 aa4.74□□□□□ -1.65
VPS13A-209ENST00000467124 GAGE12HA6NDE8 117 aa4.74□□□□□ -1.65
VPS13A-209ENST00000467124 KIF28PB7ZC32 967 aa4.74□□□□□ -1.65
VPS13A-209ENST00000467124 PRRT4C9JH25 899 aa4.74□□□□□ -1.65
VPS13A-209ENST00000467124 H0Y3Z8 333 aa4.74□□□□□ -1.65
VPS13A-209ENST00000467124 J3KRW8 73 aa4.74□□□□□ -1.65
VPS13A-209ENST00000467124 ZNF623O75123 536 aa4.74□□□□□ -1.65
VPS13A-209ENST00000467124 NCR1O76036 304 aa4.74□□□□□ -1.65
VPS13A-209ENST00000467124 RECQL4O94761 1208 aa4.74□□□□□ -1.65
VPS13A-209ENST00000467124 VIPP01282 170 aa4.74□□□□□ -1.65
VPS13A-209ENST00000467124 ANXA6P08133 673 aa4.74□□□□□ -1.65
VPS13A-209ENST00000467124 ATP1A3P13637 1013 aa4.74□□□□□ -1.65
VPS13A-209ENST00000467124 ADD2P35612 726 aa4.74□□□□□ -1.65
VPS13A-209ENST00000467124 ANXA11P50995 505 aaKnown RBP4.74□□□□□ -1.65
VPS13A-209ENST00000467124 CXADRP78310 365 aa4.74□□□□□ -1.65
VPS13A-209ENST00000467124 FSTL1Q12841 308 aa4.74□□□□□ -1.65
VPS13A-209ENST00000467124 FHL3Q13643 280 aa4.74□□□□□ -1.65
VPS13A-209ENST00000467124 E2F2Q14209 437 aa4.74□□□□□ -1.65
VPS13A-209ENST00000467124 FAM110CQ1W6H9 321 aa4.74□□□□□ -1.65
VPS13A-209ENST00000467124 ADCK5Q3MIX3 580 aa4.74□□□□□ -1.65
VPS13A-209ENST00000467124 TANGO2Q6ICL3 276 aa4.74□□□□□ -1.65
VPS13A-209ENST00000467124 USP17L6PQ6QN14 398 aa4.74□□□□□ -1.65
VPS13A-209ENST00000467124 GDF7Q7Z4P5 450 aa4.74□□□□□ -1.65
VPS13A-209ENST00000467124 TMTC1Q8IUR5 882 aa4.74□□□□□ -1.65
VPS13A-209ENST00000467124 SLC44A2Q8IWA5 706 aaPredicted RBP4.74□□□□□ -1.65
VPS13A-209ENST00000467124 FSTL5Q8N475 847 aaPredicted RBP4.74□□□□□ -1.65
VPS13A-209ENST00000467124 ESX1Q8N693 406 aa4.74□□□□□ -1.65
VPS13A-209ENST00000467124 SIMC1Q8NDZ2 872 aa4.74□□□□□ -1.65
VPS13A-209ENST00000467124 Q8TCH9 128 aa4.74□□□□□ -1.65
VPS13A-209ENST00000467124 ATRIPQ8WXE1 791 aa4.74□□□□□ -1.65
VPS13A-209ENST00000467124 SNX19Q92543 992 aa4.74□□□□□ -1.65
VPS13A-209ENST00000467124 USP13Q92995 863 aaPredicted RBP4.74□□□□□ -1.65
VPS13A-209ENST00000467124 NACC2Q96BF6 587 aa4.74□□□□□ -1.65
VPS13A-209ENST00000467124 EID2BQ96D98 161 aa4.74□□□□□ -1.65
VPS13A-209ENST00000467124 TBATAQ96M53 351 aa4.74□□□□□ -1.65
VPS13A-209ENST00000467124 HAPLN3Q96S86 360 aa4.74□□□□□ -1.65
VPS13A-209ENST00000467124 GPR20Q99678 358 aa4.74□□□□□ -1.65
VPS13A-209ENST00000467124 PYM1Q9BRP8 204 aaKnown RBP4.74□□□□□ -1.65
VPS13A-209ENST00000467124 ELAC1Q9H777 363 aaKnown RBP4.74□□□□□ -1.65
VPS13A-209ENST00000467124 TMEM8AQ9HCN3 771 aa4.74□□□□□ -1.65
VPS13A-209ENST00000467124 DNAJB11Q9UBS4 358 aa4.74□□□□□ -1.65
VPS13A-209ENST00000467124 DAPP1Q9UN19 280 aa4.74□□□□□ -1.65
VPS13A-209ENST00000467124 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.74□□□□□ -1.65
VPS13A-209ENST00000467124 PRAMEF33A0A0G2JMD5 474 aa4.73□□□□□ -1.65
VPS13A-209ENST00000467124 UNC119BA6NIH7 251 aa4.73□□□□□ -1.65
VPS13A-209ENST00000467124 PRAMEF10O60809 474 aa4.73□□□□□ -1.65
VPS13A-209ENST00000467124 TAF5LO75529 589 aa4.73□□□□□ -1.65
VPS13A-209ENST00000467124 NDUFA10O95299 355 aa4.73□□□□□ -1.65
VPS13A-209ENST00000467124 GATA3P23771 443 aa4.73□□□□□ -1.65
VPS13A-209ENST00000467124 ACRV1P26436 265 aa4.73□□□□□ -1.65
VPS13A-209ENST00000467124 PRKAR1BP31321 381 aa4.73□□□□□ -1.65
VPS13A-209ENST00000467124 UQCRC1P31930 480 aa4.73□□□□□ -1.65
VPS13A-209ENST00000467124 SEC24CP53992 1094 aa4.73□□□□□ -1.65
VPS13A-209ENST00000467124 FOXD4Q12950 439 aaPredicted RBP4.73□□□□□ -1.65
VPS13A-209ENST00000467124 RESTQ13127 1097 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms