RNA–Protein interactions for RNA: ENST00000466963.1

CXXC4-202, Transcript of CXXC finger protein 4, humanhuman

TSL 1 (best)

Gene CXXC4, Length 3,130 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-202ENST00000466963 CKMP06732 381 aa6.09□□□□□ -1.43
CXXC4-202ENST00000466963 GTF2BQ00403 316 aa6.09□□□□□ -1.43
CXXC4-202ENST00000466963 TBC1D25Q3MII6 688 aa6.09□□□□□ -1.43
CXXC4-202ENST00000466963 SLC39A12Q504Y0 691 aa6.09□□□□□ -1.43
CXXC4-202ENST00000466963 CHCHD4Q8N4Q1 142 aa6.09□□□□□ -1.43
CXXC4-202ENST00000466963 TMEM174Q8WUU8 243 aa6.09□□□□□ -1.43
CXXC4-202ENST00000466963 TMEM159Q96B96 161 aa6.09□□□□□ -1.43
CXXC4-202ENST00000466963 FNBP1Q96RU3 617 aa6.09□□□□□ -1.43
CXXC4-202ENST00000466963 SEPT5Q99719 369 aaPredicted RBP6.09□□□□□ -1.43
CXXC4-202ENST00000466963 EBF3Q9H4W6 596 aa6.09□□□□□ -1.43
CXXC4-202ENST00000466963 TM7SF3Q9NS93 570 aa6.09□□□□□ -1.43
CXXC4-202ENST00000466963 WSB2Q9NYS7 404 aaPredicted RBP6.09□□□□□ -1.43
CXXC4-202ENST00000466963 LRWD1Q9UFC0 647 aa6.09□□□□□ -1.43
CXXC4-202ENST00000466963 SUN2Q9UH99 717 aa6.09□□□□□ -1.43
CXXC4-202ENST00000466963 DMTF1Q9Y222 760 aa6.09□□□□□ -1.43
CXXC4-202ENST00000466963 PCDHA5Q9Y5H7 936 aa6.09□□□□□ -1.43
CXXC4-202ENST00000466963 CEP192Q8TEP8 1941 aa6.09□□□□□ -1.43
CXXC4-202ENST00000466963 CXorf51AA0A1B0GTR3 108 aa6.09□□□□□ -1.43
CXXC4-202ENST00000466963 CCDC169A6NNP5 214 aa6.09□□□□□ -1.43
CXXC4-202ENST00000466963 LEFTY2O00292 366 aa6.09□□□□□ -1.43
CXXC4-202ENST00000466963 TOR1BO14657 336 aa6.09□□□□□ -1.43
CXXC4-202ENST00000466963 VILLO15195 856 aa6.09□□□□□ -1.43
CXXC4-202ENST00000466963 OAS1P00973 400 aaKnown RBP6.09□□□□□ -1.43
CXXC4-202ENST00000466963 HOXB2P14652 356 aa6.09□□□□□ -1.43
CXXC4-202ENST00000466963 CD82P27701 267 aa6.09□□□□□ -1.43
CXXC4-202ENST00000466963 SGO2Q562F6 1265 aa6.09□□□□□ -1.43
CXXC4-202ENST00000466963 TMEM150AQ86TG1 271 aa6.09□□□□□ -1.43
CXXC4-202ENST00000466963 ADGRG2Q8IZP9 1017 aa6.09□□□□□ -1.43
CXXC4-202ENST00000466963 CPXM2Q8N436 756 aa6.09□□□□□ -1.43
CXXC4-202ENST00000466963 ZSCAN31Q96LW9 406 aaPredicted RBP6.09□□□□□ -1.43
CXXC4-202ENST00000466963 ZMAT2Q96NC0 199 aaKnown RBP6.09□□□□□ -1.43
CXXC4-202ENST00000466963 UBXN6Q9BZV1 441 aa6.09□□□□□ -1.43
CXXC4-202ENST00000466963 ADAMTS1Q9UHI8 967 aa6.09□□□□□ -1.43
CXXC4-202ENST00000466963 ACSL6Q9UKU0 697 aa6.09□□□□□ -1.43
CXXC4-202ENST00000466963 NAP1L2Q9ULW6 460 aaPredicted RBP6.09□□□□□ -1.43
CXXC4-202ENST00000466963 PTPRBP23467 1997 aa6.09□□□□□ -1.44
CXXC4-202ENST00000466963 USP24Q9UPU5 2620 aa6.09□□□□□ -1.44
CXXC4-202ENST00000466963 TCRBV21S2A2A0A5A6 115 aa6.08□□□□□ -1.44
CXXC4-202ENST00000466963 TMEM150BA6NC51 233 aa6.08□□□□□ -1.44
CXXC4-202ENST00000466963 ASLP04424 464 aa6.08□□□□□ -1.44
CXXC4-202ENST00000466963 CD27P26842 260 aa6.08□□□□□ -1.44
CXXC4-202ENST00000466963 CHKAP35790 457 aa6.08□□□□□ -1.44
CXXC4-202ENST00000466963 OXCT1P55809 520 aa6.08□□□□□ -1.44
CXXC4-202ENST00000466963 GRIK2Q13002 908 aa6.08□□□□□ -1.44
CXXC4-202ENST00000466963 PTPRNQ16849 979 aa6.08□□□□□ -1.44
CXXC4-202ENST00000466963 ANO7Q6IWH7 933 aa6.08□□□□□ -1.44
CXXC4-202ENST00000466963 DENND5BQ6ZUT9 1274 aa6.08□□□□□ -1.44
CXXC4-202ENST00000466963 MAB21L3Q8N8X9 362 aa6.08□□□□□ -1.44
CXXC4-202ENST00000466963 IPO4Q8TEX9 1081 aaKnown RBP6.08□□□□□ -1.44
CXXC4-202ENST00000466963 BSNDQ8WZ55 320 aa6.08□□□□□ -1.44
CXXC4-202ENST00000466963 TAF4BQ92750 862 aa6.08□□□□□ -1.44
CXXC4-202ENST00000466963 LRRC3BQ96PB8 259 aa6.08□□□□□ -1.44
CXXC4-202ENST00000466963 VRTNQ9H8Y1 702 aa6.08□□□□□ -1.44
CXXC4-202ENST00000466963 CD248Q9HCU0 757 aa6.08□□□□□ -1.44
CXXC4-202ENST00000466963 DPP3Q9NY33 737 aa6.08□□□□□ -1.44
CXXC4-202ENST00000466963 FZD4Q9ULV1 537 aa6.08□□□□□ -1.44
CXXC4-202ENST00000466963 SH3BP1Q9Y3L3 701 aa6.08□□□□□ -1.44
CXXC4-202ENST00000466963 HIP1RO75146 1068 aa6.08□□□□□ -1.44
CXXC4-202ENST00000466963 ARSAP15289 507 aa6.08□□□□□ -1.44
CXXC4-202ENST00000466963 GABRG2P18507 467 aa6.08□□□□□ -1.44
CXXC4-202ENST00000466963 BCKDHBP21953 392 aa6.08□□□□□ -1.44
CXXC4-202ENST00000466963 ACP1P24666 158 aa6.08□□□□□ -1.44
CXXC4-202ENST00000466963 TXKP42681 527 aa6.08□□□□□ -1.44
CXXC4-202ENST00000466963 SOX9P48436 509 aa6.08□□□□□ -1.44
CXXC4-202ENST00000466963 EIF3IQ13347 325 aaKnown RBP6.08□□□□□ -1.44
CXXC4-202ENST00000466963 GAB4Q2WGN9 574 aa6.08□□□□□ -1.44
CXXC4-202ENST00000466963 TTC31Q49AM3 519 aaPredicted RBP6.08□□□□□ -1.44
CXXC4-202ENST00000466963 SDR16C5Q8N3Y7 309 aa6.08□□□□□ -1.44
CXXC4-202ENST00000466963 ZNF843Q8N446 348 aa6.08□□□□□ -1.44
CXXC4-202ENST00000466963 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.08□□□□□ -1.44
CXXC4-202ENST00000466963 TRIML1Q8N9V2 468 aa6.08□□□□□ -1.44
CXXC4-202ENST00000466963 CHFRQ96EP1 664 aa6.08□□□□□ -1.44
CXXC4-202ENST00000466963 DEPDC7Q96QD5 511 aa6.08□□□□□ -1.44
CXXC4-202ENST00000466963 DNMT3LQ9UJW3 386 aa6.08□□□□□ -1.44
CXXC4-202ENST00000466963 SPAARA0A1B0GVQ0 90 aa6.08□□□□□ -1.44
CXXC4-202ENST00000466963 ENC1O14682 589 aa6.08□□□□□ -1.44
CXXC4-202ENST00000466963 MED24O75448 989 aa6.08□□□□□ -1.44
CXXC4-202ENST00000466963 TADA3O75528 432 aa6.08□□□□□ -1.44
CXXC4-202ENST00000466963 ZDHHC11BP0C7U3 371 aa6.08□□□□□ -1.44
CXXC4-202ENST00000466963 PEX3P56589 373 aa6.08□□□□□ -1.44
CXXC4-202ENST00000466963 RACK1P63244 317 aaKnown RBP6.08□□□□□ -1.44
CXXC4-202ENST00000466963 RINT1Q6NUQ1 792 aa6.08□□□□□ -1.44
CXXC4-202ENST00000466963 ZNF513Q8N8E2 541 aaPredicted RBP6.08□□□□□ -1.44
CXXC4-202ENST00000466963 TXNDC5Q8NBS9 432 aaKnown RBP6.08□□□□□ -1.44
CXXC4-202ENST00000466963 PPP1R9BQ96SB3 815 aa6.08□□□□□ -1.44
CXXC4-202ENST00000466963 MMS19Q96T76 1030 aa6.08□□□□□ -1.44
CXXC4-202ENST00000466963 KIFC3Q9BVG8 833 aa6.08□□□□□ -1.44
CXXC4-202ENST00000466963 TARS2Q9BW92 718 aaKnown RBP6.08□□□□□ -1.44
CXXC4-202ENST00000466963 SPHK2Q9NRA0 654 aa6.08□□□□□ -1.44
CXXC4-202ENST00000466963 PDRG1Q9NUG6 133 aa6.08□□□□□ -1.44
CXXC4-202ENST00000466963 STK17AQ9UEE5 414 aa6.08□□□□□ -1.44
CXXC4-202ENST00000466963 NCKAP1Q9Y2A7 1128 aa6.08□□□□□ -1.44
CXXC4-202ENST00000466963 TCHHQ07283 1943 aa6.07□□□□□ -1.44
CXXC4-202ENST00000466963 ENO4A6NNW6 628 aa6.07□□□□□ -1.44
CXXC4-202ENST00000466963 LACTBL1A8MY62 500 aa6.07□□□□□ -1.44
CXXC4-202ENST00000466963 FAM189A1O60320 539 aa6.07□□□□□ -1.44
CXXC4-202ENST00000466963 P4HA1P13674 534 aa6.07□□□□□ -1.44
CXXC4-202ENST00000466963 BCAT1P54687 386 aa6.07□□□□□ -1.44
CXXC4-202ENST00000466963 CYP4F8P98187 520 aa6.07□□□□□ -1.44
CXXC4-202ENST00000466963 GNL2Q13823 731 aaKnown RBP6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms