RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 KCNA4P22459 653 aa18.61■□□□□ 0.57
COL7A1-206ENST00000466591 RPL13P26373 211 aaKnown RBP18.61■□□□□ 0.57
COL7A1-206ENST00000466591 WDR44Q5JSH3 913 aa18.61■□□□□ 0.57
COL7A1-206ENST00000466591 SLC9A9Q8IVB4 645 aa18.61■□□□□ 0.57
COL7A1-206ENST00000466591 RIN3Q8TB24 985 aa18.61■□□□□ 0.57
COL7A1-206ENST00000466591 HHIPQ96QV1 700 aa18.61■□□□□ 0.57
COL7A1-206ENST00000466591 TTLL2Q9BWV7 592 aa18.61■□□□□ 0.57
COL7A1-206ENST00000466591 XYLT2Q9H1B5 865 aa18.61■□□□□ 0.57
COL7A1-206ENST00000466591 MMRN2Q9H8L6 949 aa18.61■□□□□ 0.57
COL7A1-206ENST00000466591 KRT82Q9NSB4 513 aa18.61■□□□□ 0.57
COL7A1-206ENST00000466591 SH3BP1Q9Y3L3 701 aa18.61■□□□□ 0.57
COL7A1-206ENST00000466591 GOLGA6L4A6NEF3 574 aa18.6■□□□□ 0.57
COL7A1-206ENST00000466591 FOXD2O60548 495 aaPredicted RBP18.6■□□□□ 0.57
COL7A1-206ENST00000466591 LRP3O75074 770 aa18.6■□□□□ 0.57
COL7A1-206ENST00000466591 AP1G2O75843 785 aa18.6■□□□□ 0.57
COL7A1-206ENST00000466591 NR2F2P24468 414 aa18.6■□□□□ 0.57
COL7A1-206ENST00000466591 FILIP1Q7Z7B0 1213 aa18.6■□□□□ 0.57
COL7A1-206ENST00000466591 ACOT1Q86TX2 421 aa18.6■□□□□ 0.57
COL7A1-206ENST00000466591 FAM35AQ86V20 835 aa18.6■□□□□ 0.57
COL7A1-206ENST00000466591 TTC30AQ86WT1 665 aa18.6■□□□□ 0.57
COL7A1-206ENST00000466591 CAMKK1Q8N5S9 505 aa18.6■□□□□ 0.57
COL7A1-206ENST00000466591 FAM160A2Q8N612 972 aaPredicted RBP18.6■□□□□ 0.57
COL7A1-206ENST00000466591 C12orf50Q8NA57 414 aaPredicted RBP18.6■□□□□ 0.57
COL7A1-206ENST00000466591 TAF4BQ92750 862 aa18.6■□□□□ 0.57
COL7A1-206ENST00000466591 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.6■□□□□ 0.57
COL7A1-206ENST00000466591 C2orf42Q9NWW7 574 aa18.6■□□□□ 0.57
COL7A1-206ENST00000466591 CFAP97Q9P2B7 532 aa18.6■□□□□ 0.57
COL7A1-206ENST00000466591 MAPK8IP1Q9UQF2 711 aa18.6■□□□□ 0.57
COL7A1-206ENST00000466591 SCAMP3O14828 347 aaKnown RBP18.59■□□□□ 0.57
COL7A1-206ENST00000466591 AXIN1O15169 862 aa18.59■□□□□ 0.57
COL7A1-206ENST00000466591 ADH1CP00326 375 aa18.59■□□□□ 0.57
COL7A1-206ENST00000466591 C4BPAP04003 597 aaKnown RBP18.59■□□□□ 0.57
COL7A1-206ENST00000466591 HOXA6P31267 233 aa18.59■□□□□ 0.57
COL7A1-206ENST00000466591 VAMP7P51809 220 aa18.59■□□□□ 0.57
COL7A1-206ENST00000466591 NDUFA8P51970 172 aa18.59■□□□□ 0.57
COL7A1-206ENST00000466591 SEC13P55735 322 aa18.59■□□□□ 0.57
COL7A1-206ENST00000466591 SLC7A9P82251 487 aa18.59■□□□□ 0.57
COL7A1-206ENST00000466591 HECTD3Q5T447 861 aa18.59■□□□□ 0.57
COL7A1-206ENST00000466591 PKN3Q6P5Z2 889 aa18.59■□□□□ 0.57
COL7A1-206ENST00000466591 CACNA2D4Q7Z3S7 1137 aa18.59■□□□□ 0.57
COL7A1-206ENST00000466591 TMC2Q8TDI7 906 aa18.59■□□□□ 0.57
COL7A1-206ENST00000466591 GAB3Q8WWW8 586 aa18.59■□□□□ 0.57
COL7A1-206ENST00000466591 ELMO3Q96BJ8 720 aa18.59■□□□□ 0.57
COL7A1-206ENST00000466591 LINC00597Q9H2U6 94 aa18.59■□□□□ 0.57
COL7A1-206ENST00000466591 KCTD10Q9H3F6 313 aa18.59■□□□□ 0.57
COL7A1-206ENST00000466591 VRTNQ9H8Y1 702 aa18.59■□□□□ 0.57
COL7A1-206ENST00000466591 SEMA4GQ9NTN9 838 aa18.59■□□□□ 0.57
COL7A1-206ENST00000466591 CIZ1Q9ULV3 898 aaPredicted RBP18.59■□□□□ 0.57
COL7A1-206ENST00000466591 NME7Q9Y5B8 376 aa18.59■□□□□ 0.57
COL7A1-206ENST00000466591 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.58■□□□□ 0.56
COL7A1-206ENST00000466591 APBB3O95704 486 aa18.58■□□□□ 0.56
COL7A1-206ENST00000466591 CCDC130P13994 396 aa18.58■□□□□ 0.56
COL7A1-206ENST00000466591 TCF3P15923 654 aa18.58■□□□□ 0.56
COL7A1-206ENST00000466591 CACNA2D1P54289 1103 aa18.58■□□□□ 0.56
COL7A1-206ENST00000466591 DLG4P78352 724 aa18.58■□□□□ 0.56
COL7A1-206ENST00000466591 ORC1Q13415 861 aa18.58■□□□□ 0.56
COL7A1-206ENST00000466591 DMC1Q14565 340 aa18.58■□□□□ 0.56
COL7A1-206ENST00000466591 AASDHQ4L235 1098 aaPredicted RBP18.58■□□□□ 0.56
COL7A1-206ENST00000466591 C2orf27AQ580R0 203 aa18.58■□□□□ 0.56
COL7A1-206ENST00000466591 BTBD8Q5XKL5 378 aa18.58■□□□□ 0.56
COL7A1-206ENST00000466591 INTS8Q75QN2 995 aaKnown RBP18.58■□□□□ 0.56
COL7A1-206ENST00000466591 FAM186BQ8IYM0 893 aa18.58■□□□□ 0.56
COL7A1-206ENST00000466591 TSTD1Q8NFU3 115 aa18.58■□□□□ 0.56
COL7A1-206ENST00000466591 PLEKHO2Q8TD55 490 aa18.58■□□□□ 0.56
COL7A1-206ENST00000466591 OVCA2Q8WZ82 227 aa18.58■□□□□ 0.56
COL7A1-206ENST00000466591 JAKMIP2Q96AA8 810 aa18.58■□□□□ 0.56
COL7A1-206ENST00000466591 KCNK16Q96T55 309 aa18.58■□□□□ 0.56
COL7A1-206ENST00000466591 FBRSL1Q9HCM7 1045 aaKnown RBP18.58■□□□□ 0.56
COL7A1-206ENST00000466591 DLL3Q9NYJ7 618 aa18.58■□□□□ 0.56
COL7A1-206ENST00000466591 TBC1D14Q9P2M4 693 aa18.58■□□□□ 0.56
COL7A1-206ENST00000466591 CHORDC1Q9UHD1 332 aaPredicted RBP18.58■□□□□ 0.56
COL7A1-206ENST00000466591 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.58■□□□□ 0.56
COL7A1-206ENST00000466591 CCDC163A0A0D9SF12 145 aa18.57■□□□□ 0.56
COL7A1-206ENST00000466591 IKBKBO14920 756 aa18.57■□□□□ 0.56
COL7A1-206ENST00000466591 HLA-DRAP01903 254 aa18.57■□□□□ 0.56
COL7A1-206ENST00000466591 IRF1P10914 325 aa18.57■□□□□ 0.56
COL7A1-206ENST00000466591 ADORA2BP29275 332 aa18.57■□□□□ 0.56
COL7A1-206ENST00000466591 GBP1P32455 592 aa18.57■□□□□ 0.56
COL7A1-206ENST00000466591 DGKEP52429 567 aa18.57■□□□□ 0.56
COL7A1-206ENST00000466591 NDST1P52848 882 aa18.57■□□□□ 0.56
COL7A1-206ENST00000466591 SLC5A3P53794 718 aa18.57■□□□□ 0.56
COL7A1-206ENST00000466591 GOLGA8FQ08AF8 430 aa18.57■□□□□ 0.56
COL7A1-206ENST00000466591 GOLGA8DPQ0D2H9 430 aa18.57■□□□□ 0.56
COL7A1-206ENST00000466591 ELF2Q15723 593 aa18.57■□□□□ 0.56
COL7A1-206ENST00000466591 CSRP2Q16527 193 aa18.57■□□□□ 0.56
COL7A1-206ENST00000466591 ZACNQ401N2 412 aa18.57■□□□□ 0.56
COL7A1-206ENST00000466591 NAIF1Q69YI7 327 aaPredicted RBP18.57■□□□□ 0.56
COL7A1-206ENST00000466591 PRR23CQ6ZRP0 262 aa18.57■□□□□ 0.56
COL7A1-206ENST00000466591 SV2AQ7L0J3 742 aa18.57■□□□□ 0.56
COL7A1-206ENST00000466591 SYT13Q7L8C5 426 aa18.57■□□□□ 0.56
COL7A1-206ENST00000466591 SLC2A14Q8TDB8 520 aa18.57■□□□□ 0.56
COL7A1-206ENST00000466591 NETO1Q8TDF5 533 aa18.57■□□□□ 0.56
COL7A1-206ENST00000466591 RTKNQ9BST9 563 aa18.57■□□□□ 0.56
COL7A1-206ENST00000466591 RNF38Q9H0F5 515 aa18.57■□□□□ 0.56
COL7A1-206ENST00000466591 GZF1Q9H116 711 aaPredicted RBP18.57■□□□□ 0.56
COL7A1-206ENST00000466591 FBXO44Q9H4M3 255 aa18.57■□□□□ 0.56
COL7A1-206ENST00000466591 PARD6AQ9NPB6 346 aa18.57■□□□□ 0.56
COL7A1-206ENST00000466591 FAM49BQ9NUQ9 324 aa18.57■□□□□ 0.56
COL7A1-206ENST00000466591 DMAC2Q9NW81 257 aa18.57■□□□□ 0.56
COL7A1-206ENST00000466591 HPSEQ9Y251 543 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms