RNA–Protein interactions for RNA: ENST00000466392.1

EDEM3-204, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 5

Gene EDEM3, Length 491 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-204ENST00000466392 TDP1Q9NUW8 608 aa12.5□□□□□ -0.41
EDEM3-204ENST00000466392 TRPM5Q9NZQ8 1165 aa12.5□□□□□ -0.41
EDEM3-204ENST00000466392 GMIPQ9P107 970 aa12.5□□□□□ -0.41
EDEM3-204ENST00000466392 GCNT4Q9P109 453 aa12.5□□□□□ -0.41
EDEM3-204ENST00000466392 RNF225M0QZC1 329 aaPredicted RBP12.49□□□□□ -0.41
EDEM3-204ENST00000466392 TULP2O00295 520 aa12.49□□□□□ -0.41
EDEM3-204ENST00000466392 CHADO15335 359 aa12.49□□□□□ -0.41
EDEM3-204ENST00000466392 FGFR1OPO95684 399 aaKnown RBP12.49□□□□□ -0.41
EDEM3-204ENST00000466392 HDCP19113 662 aa12.49□□□□□ -0.41
EDEM3-204ENST00000466392 ACO1P21399 889 aaKnown RBP12.49□□□□□ -0.41
EDEM3-204ENST00000466392 DDX6P26196 483 aaKnown RBP eCLIP12.49□□□□□ -0.41
EDEM3-204ENST00000466392 TARSP26639 723 aaKnown RBP12.49□□□□□ -0.41
EDEM3-204ENST00000466392 MTIF2P46199 727 aaKnown RBP12.49□□□□□ -0.41
EDEM3-204ENST00000466392 CLCN5P51795 746 aa12.49□□□□□ -0.41
EDEM3-204ENST00000466392 STARD6P59095 220 aa12.49□□□□□ -0.41
EDEM3-204ENST00000466392 GOLGA7BQ2TAP0 167 aa12.49□□□□□ -0.41
EDEM3-204ENST00000466392 PHLDB3Q6NSJ2 640 aa12.49□□□□□ -0.41
EDEM3-204ENST00000466392 RBM43Q6ZSC3 357 aaKnown RBP12.49□□□□□ -0.41
EDEM3-204ENST00000466392 C11orf57Q6ZUT1 292 aaPredicted RBP12.49□□□□□ -0.41
EDEM3-204ENST00000466392 EHBP1Q8NDI1 1231 aa12.49□□□□□ -0.41
EDEM3-204ENST00000466392 PJA1Q8NG27 643 aa12.49□□□□□ -0.41
EDEM3-204ENST00000466392 DNASE1L2Q92874 299 aa12.49□□□□□ -0.41
EDEM3-204ENST00000466392 E2F7Q96AV8 911 aa12.49□□□□□ -0.41
EDEM3-204ENST00000466392 KREMEN1Q96MU8 473 aa12.49□□□□□ -0.41
EDEM3-204ENST00000466392 SLITRK1Q96PX8 696 aa12.49□□□□□ -0.41
EDEM3-204ENST00000466392 CCSER2Q9H7U1 834 aa12.49□□□□□ -0.41
EDEM3-204ENST00000466392 GKN1Q9NS71 199 aa12.49□□□□□ -0.41
EDEM3-204ENST00000466392 SAMSN1Q9NSI8 373 aaKnown RBP12.49□□□□□ -0.41
EDEM3-204ENST00000466392 SMPD4Q9NXE4 827 aa12.49□□□□□ -0.41
EDEM3-204ENST00000466392 NDRG2Q9UN36 371 aaKnown RBP12.49□□□□□ -0.41
EDEM3-204ENST00000466392 PCDHB4Q9Y5E5 795 aa12.49□□□□□ -0.41
EDEM3-204ENST00000466392 PIAS3Q9Y6X2 628 aa12.49□□□□□ -0.41
EDEM3-204ENST00000466392 MUC6Q6W4X9 2439 aa12.49□□□□□ -0.41
EDEM3-204ENST00000466392 KANSL1LA0AUZ9 987 aa12.48□□□□□ -0.41
EDEM3-204ENST00000466392 OTOL1A6NHN0 477 aaPredicted RBP12.48□□□□□ -0.41
EDEM3-204ENST00000466392 PMM2O15305 246 aa12.48□□□□□ -0.41
EDEM3-204ENST00000466392 CYP26A1O43174 497 aa12.48□□□□□ -0.41
EDEM3-204ENST00000466392 RTN3O95197 1032 aaPredicted RBP12.48□□□□□ -0.41
EDEM3-204ENST00000466392 OAS1P00973 400 aaKnown RBP12.48□□□□□ -0.41
EDEM3-204ENST00000466392 USP17L7P0C7H9 530 aa12.48□□□□□ -0.41
EDEM3-204ENST00000466392 ARSAP15289 507 aa12.48□□□□□ -0.41
EDEM3-204ENST00000466392 CD19P15391 556 aa12.48□□□□□ -0.41
EDEM3-204ENST00000466392 SLC9A1P19634 815 aa12.48□□□□□ -0.41
EDEM3-204ENST00000466392 WEE1P30291 646 aa12.48□□□□□ -0.41
EDEM3-204ENST00000466392 TCF15Q12870 199 aa12.48□□□□□ -0.41
EDEM3-204ENST00000466392 MTF1Q14872 753 aa12.48□□□□□ -0.41
EDEM3-204ENST00000466392 ZNF77Q15935 545 aa12.48□□□□□ -0.41
EDEM3-204ENST00000466392 ARHGAP29Q52LW3 1261 aa12.48□□□□□ -0.41
EDEM3-204ENST00000466392 TMEM270Q6UE05 265 aa12.48□□□□□ -0.41
EDEM3-204ENST00000466392 TTC30AQ86WT1 665 aa12.48□□□□□ -0.41
EDEM3-204ENST00000466392 CCDC105Q8IYK2 499 aa12.48□□□□□ -0.41
EDEM3-204ENST00000466392 CSGALNACT1Q8TDX6 532 aa12.48□□□□□ -0.41
EDEM3-204ENST00000466392 SH3RF2Q8TEC5 729 aa12.48□□□□□ -0.41
EDEM3-204ENST00000466392 TFAP2BQ92481 460 aa12.48□□□□□ -0.41
EDEM3-204ENST00000466392 FAXDC2Q96IV6 333 aa12.48□□□□□ -0.41
EDEM3-204ENST00000466392 CEP295NLQ96MC4 621 aa12.48□□□□□ -0.41
EDEM3-204ENST00000466392 ZSWIM1Q9BR11 485 aa12.48□□□□□ -0.41
EDEM3-204ENST00000466392 DDX23Q9BUQ8 820 aaKnown RBP12.48□□□□□ -0.41
EDEM3-204ENST00000466392 EBF3Q9H4W6 596 aa12.48□□□□□ -0.41
EDEM3-204ENST00000466392 LTB4R2Q9NPC1 389 aa12.48□□□□□ -0.41
EDEM3-204ENST00000466392 HPS4Q9NQG7 708 aa12.48□□□□□ -0.41
EDEM3-204ENST00000466392 FAM86C1Q9NVL1 165 aa12.48□□□□□ -0.41
EDEM3-204ENST00000466392 OSER1Q9NX31 292 aa12.48□□□□□ -0.41
EDEM3-204ENST00000466392 OBP2AQ9NY56 170 aa12.48□□□□□ -0.41
EDEM3-204ENST00000466392 TMEM63CQ9P1W3 806 aa12.48□□□□□ -0.41
EDEM3-204ENST00000466392 DACH1Q9UI36 760 aa12.48□□□□□ -0.41
EDEM3-204ENST00000466392 TSPAN16Q9UKR8 245 aa12.48□□□□□ -0.41
EDEM3-204ENST00000466392 SIT1Q9Y3P8 196 aa12.48□□□□□ -0.41
EDEM3-204ENST00000466392 WNT6Q9Y6F9 365 aa12.48□□□□□ -0.41
EDEM3-204ENST00000466392 FAM170BA6NMN3 283 aa12.47□□□□□ -0.41
EDEM3-204ENST00000466392 H0Y858 1186 aa12.47□□□□□ -0.41
EDEM3-204ENST00000466392 LEFTY2O00292 366 aa12.47□□□□□ -0.41
EDEM3-204ENST00000466392 P4HA2O15460 535 aa12.47□□□□□ -0.41
EDEM3-204ENST00000466392 TRIM21P19474 475 aaKnown RBP12.47□□□□□ -0.41
EDEM3-204ENST00000466392 TBXAS1P24557 533 aaPredicted RBP12.47□□□□□ -0.41
EDEM3-204ENST00000466392 BRD2P25440 801 aaKnown RBP12.47□□□□□ -0.41
EDEM3-204ENST00000466392 ERCC5P28715 1186 aaPredicted RBP12.47□□□□□ -0.41
EDEM3-204ENST00000466392 KPNA1P52294 538 aaPredicted RBP12.47□□□□□ -0.41
EDEM3-204ENST00000466392 PRKCQQ04759 706 aa12.47□□□□□ -0.41
EDEM3-204ENST00000466392 CETN1Q12798 172 aa12.47□□□□□ -0.41
EDEM3-204ENST00000466392 USP4Q13107 963 aa12.47□□□□□ -0.41
EDEM3-204ENST00000466392 NAIF1Q69YI7 327 aaPredicted RBP12.47□□□□□ -0.41
EDEM3-204ENST00000466392 TXNDC11Q6PKC3 985 aa12.47□□□□□ -0.41
EDEM3-204ENST00000466392 RBBP8NLQ8NC74 664 aaPredicted RBP12.47□□□□□ -0.41
EDEM3-204ENST00000466392 UBA3Q8TBC4 463 aa12.47□□□□□ -0.41
EDEM3-204ENST00000466392 WBP2Q969T9 261 aa12.47□□□□□ -0.41
EDEM3-204ENST00000466392 SHDQ96IW2 340 aa12.47□□□□□ -0.41
EDEM3-204ENST00000466392 DUSP16Q9BY84 665 aa12.47□□□□□ -0.41
EDEM3-204ENST00000466392 THAP9Q9H5L6 903 aa12.47□□□□□ -0.41
EDEM3-204ENST00000466392 KIF9Q9HAQ2 790 aa12.47□□□□□ -0.41
EDEM3-204ENST00000466392 NMUR1Q9HB89 426 aa12.47□□□□□ -0.41
EDEM3-204ENST00000466392 IL37Q9NZH6 218 aa12.47□□□□□ -0.41
EDEM3-204ENST00000466392 EHD2Q9NZN4 543 aa12.47□□□□□ -0.41
EDEM3-204ENST00000466392 DLGAP2Q9P1A6 1054 aa12.47□□□□□ -0.41
EDEM3-204ENST00000466392 AJAP1Q9UKB5 411 aaPredicted RBP12.47□□□□□ -0.41
EDEM3-204ENST00000466392 NUDT5Q9UKK9 219 aa12.47□□□□□ -0.41
EDEM3-204ENST00000466392 CPQQ9Y646 472 aa12.47□□□□□ -0.41
EDEM3-204ENST00000466392 MYOFQ9NZM1 2061 aa12.46□□□□□ -0.41
EDEM3-204ENST00000466392 FAM92AA1XBS5 289 aa12.46□□□□□ -0.41
EDEM3-204ENST00000466392 KCNJ18B7U540 433 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms