RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 CALN1Q9BXU9 219 aa14.21□□□□□ -0.13
UBE4B-206ENST00000466379 NGRNQ9NPE2 291 aaKnown RBP14.21□□□□□ -0.13
UBE4B-206ENST00000466379 ANAPC5Q9UJX4 755 aa14.21□□□□□ -0.13
UBE4B-206ENST00000466379 SMIM23A6NLE4 172 aa14.21□□□□□ -0.14
UBE4B-206ENST00000466379 SETSIPP0DME0 302 aa14.21□□□□□ -0.14
UBE4B-206ENST00000466379 HPDP32754 393 aaPredicted RBP14.21□□□□□ -0.14
UBE4B-206ENST00000466379 SCNN1GP51170 649 aa14.21□□□□□ -0.14
UBE4B-206ENST00000466379 OTUD4Q01804 1114 aaKnown RBP14.21□□□□□ -0.14
UBE4B-206ENST00000466379 PLCB3Q01970 1234 aa14.21□□□□□ -0.14
UBE4B-206ENST00000466379 BST2Q10589 180 aaKnown RBP14.21□□□□□ -0.14
UBE4B-206ENST00000466379 P3H1Q32P28 736 aa14.21□□□□□ -0.14
UBE4B-206ENST00000466379 CCSAPQ6IQ19 270 aaPredicted RBP14.21□□□□□ -0.14
UBE4B-206ENST00000466379 AGMOQ6ZNB7 445 aa14.21□□□□□ -0.14
UBE4B-206ENST00000466379 LIMS2Q7Z4I7 341 aa14.21□□□□□ -0.14
UBE4B-206ENST00000466379 ANKRD52Q8NB46 1076 aa14.21□□□□□ -0.14
UBE4B-206ENST00000466379 ACTL9Q8TC94 416 aa14.21□□□□□ -0.14
UBE4B-206ENST00000466379 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.21□□□□□ -0.14
UBE4B-206ENST00000466379 PADI3Q9ULW8 664 aa14.21□□□□□ -0.14
UBE4B-206ENST00000466379 TIMM13Q9Y5L4 95 aaPredicted RBP14.21□□□□□ -0.14
UBE4B-206ENST00000466379 CASTOR2A6NHX0 329 aa14.2□□□□□ -0.14
UBE4B-206ENST00000466379 DCDC2CA8MYV0 355 aa14.2□□□□□ -0.14
UBE4B-206ENST00000466379 RIPK2O43353 540 aa14.2□□□□□ -0.14
UBE4B-206ENST00000466379 NR1D1P20393 614 aa14.2□□□□□ -0.14
UBE4B-206ENST00000466379 CLCNKBP51801 687 aa14.2□□□□□ -0.14
UBE4B-206ENST00000466379 RABGGTBP53611 331 aa14.2□□□□□ -0.14
UBE4B-206ENST00000466379 BCAT1P54687 386 aa14.2□□□□□ -0.14
UBE4B-206ENST00000466379 VCPP55072 806 aaKnown RBP14.2□□□□□ -0.14
UBE4B-206ENST00000466379 NOGQ13253 232 aa14.2□□□□□ -0.14
UBE4B-206ENST00000466379 OASLQ15646 514 aaKnown RBP14.2□□□□□ -0.14
UBE4B-206ENST00000466379 KIAA0319Q5VV43 1072 aa14.2□□□□□ -0.14
UBE4B-206ENST00000466379 B4GALNT4Q76KP1 1039 aa14.2□□□□□ -0.14
UBE4B-206ENST00000466379 ALLCQ8N6M5 410 aa14.2□□□□□ -0.14
UBE4B-206ENST00000466379 C3orf58Q8NDZ4 430 aa14.2□□□□□ -0.14
UBE4B-206ENST00000466379 CMASQ8NFW8 434 aaPredicted RBP14.2□□□□□ -0.14
UBE4B-206ENST00000466379 CD99L2Q8TCZ2 262 aa14.2□□□□□ -0.14
UBE4B-206ENST00000466379 FAM172AQ8WUF8 416 aa14.2□□□□□ -0.14
UBE4B-206ENST00000466379 NDRG1Q92597 394 aaKnown RBP14.2□□□□□ -0.14
UBE4B-206ENST00000466379 PAAF1Q9BRP4 392 aa14.2□□□□□ -0.14
UBE4B-206ENST00000466379 TSPYL2Q9H2G4 693 aaPredicted RBP14.2□□□□□ -0.14
UBE4B-206ENST00000466379 CDC42EP4Q9H3Q1 356 aaKnown RBP14.2□□□□□ -0.14
UBE4B-206ENST00000466379 THSD7BQ9C0I4 1608 aa14.2□□□□□ -0.14
UBE4B-206ENST00000466379 ARL5CA6NH57 179 aa14.2□□□□□ -0.14
UBE4B-206ENST00000466379 HMGB1P1B2RPK0 211 aaPredicted RBP14.2□□□□□ -0.14
UBE4B-206ENST00000466379 RARGP13631 454 aa14.2□□□□□ -0.14
UBE4B-206ENST00000466379 PECAM1P16284 738 aaPredicted RBP14.2□□□□□ -0.14
UBE4B-206ENST00000466379 WARSP23381 471 aaKnown RBP14.2□□□□□ -0.14
UBE4B-206ENST00000466379 PCK1P35558 622 aa14.2□□□□□ -0.14
UBE4B-206ENST00000466379 ARSEP51690 589 aa14.2□□□□□ -0.14
UBE4B-206ENST00000466379 ATXN1P54253 815 aaKnown RBP14.2□□□□□ -0.14
UBE4B-206ENST00000466379 CDH6P55285 790 aa14.2□□□□□ -0.14
UBE4B-206ENST00000466379 NKX3-2P78367 333 aa14.2□□□□□ -0.14
UBE4B-206ENST00000466379 SLMAPQ14BN4 828 aa14.2□□□□□ -0.14
UBE4B-206ENST00000466379 ACAP1Q15027 740 aa14.2□□□□□ -0.14
UBE4B-206ENST00000466379 ZC3H12AQ5D1E8 599 aaKnown RBP14.2□□□□□ -0.14
UBE4B-206ENST00000466379 SPDYCQ5MJ68 293 aa14.2□□□□□ -0.14
UBE4B-206ENST00000466379 FAM182AQ5T1J6 154 aa14.2□□□□□ -0.14
UBE4B-206ENST00000466379 CCDC89Q8N998 374 aa14.2□□□□□ -0.14
UBE4B-206ENST00000466379 B3GALNT2Q8NCR0 500 aa14.2□□□□□ -0.14
UBE4B-206ENST00000466379 CAPNS2Q96L46 248 aa14.2□□□□□ -0.14
UBE4B-206ENST00000466379 TSPAN18Q96SJ8 248 aa14.2□□□□□ -0.14
UBE4B-206ENST00000466379 TRAIPQ9BWF2 469 aa14.2□□□□□ -0.14
UBE4B-206ENST00000466379 CASP8AP2Q9UKL3 1982 aa14.19□□□□□ -0.14
UBE4B-206ENST00000466379 TLDC2A0PJX2 215 aa14.19□□□□□ -0.14
UBE4B-206ENST00000466379 SGK1O00141 431 aa14.19□□□□□ -0.14
UBE4B-206ENST00000466379 GPR182O15218 404 aa14.19□□□□□ -0.14
UBE4B-206ENST00000466379 PRPSAP2O60256 369 aa14.19□□□□□ -0.14
UBE4B-206ENST00000466379 CAND2O75155 1236 aa14.19□□□□□ -0.14
UBE4B-206ENST00000466379 IFNB1P01574 187 aa14.19□□□□□ -0.14
UBE4B-206ENST00000466379 THP07101 528 aa14.19□□□□□ -0.14
UBE4B-206ENST00000466379 NUDT17P0C025 328 aa14.19□□□□□ -0.14
UBE4B-206ENST00000466379 SDC4P31431 198 aa14.19□□□□□ -0.14
UBE4B-206ENST00000466379 TAZQ16635 292 aa14.19□□□□□ -0.14
UBE4B-206ENST00000466379 DRICH1Q6PGQ1 229 aaPredicted RBP14.19□□□□□ -0.14
UBE4B-206ENST00000466379 NPNTQ6UXI9 565 aa14.19□□□□□ -0.14
UBE4B-206ENST00000466379 BBS12Q6ZW61 710 aa14.19□□□□□ -0.14
UBE4B-206ENST00000466379 TOP6BLQ8N6T0 577 aa14.19□□□□□ -0.14
UBE4B-206ENST00000466379 SLC35B2Q8TB61 432 aa14.19□□□□□ -0.14
UBE4B-206ENST00000466379 ADAM33Q9BZ11 813 aa14.19□□□□□ -0.14
UBE4B-206ENST00000466379 CHST12Q9NRB3 414 aa14.19□□□□□ -0.14
UBE4B-206ENST00000466379 NOVA2Q9UNW9 492 aaKnown RBP14.19□□□□□ -0.14
UBE4B-206ENST00000466379 TRPA1O75762 1119 aa14.18□□□□□ -0.14
UBE4B-206ENST00000466379 BEST1O76090 585 aa14.18□□□□□ -0.14
UBE4B-206ENST00000466379 ACSL3O95573 720 aa14.18□□□□□ -0.14
UBE4B-206ENST00000466379 GDF10P55107 478 aa14.18□□□□□ -0.14
UBE4B-206ENST00000466379 GNGT1P63211 74 aa14.18□□□□□ -0.14
UBE4B-206ENST00000466379 GPS1Q13098 491 aa14.18□□□□□ -0.14
UBE4B-206ENST00000466379 ITGA7Q13683 1181 aa14.18□□□□□ -0.14
UBE4B-206ENST00000466379 LPIN1Q14693 890 aa14.18□□□□□ -0.14
UBE4B-206ENST00000466379 CA9Q16790 459 aa14.18□□□□□ -0.14
UBE4B-206ENST00000466379 PAN2Q504Q3 1202 aaKnown RBP14.18□□□□□ -0.14
UBE4B-206ENST00000466379 MDH1BQ5I0G3 518 aa14.18□□□□□ -0.14
UBE4B-206ENST00000466379 FUKQ8N0W3 1084 aa14.18□□□□□ -0.14
UBE4B-206ENST00000466379 NKD2Q969F2 451 aaPredicted RBP14.18□□□□□ -0.14
UBE4B-206ENST00000466379 SENP8Q96LD8 212 aa14.18□□□□□ -0.14
UBE4B-206ENST00000466379 CAPS2Q9BXY5 557 aa14.18□□□□□ -0.14
UBE4B-206ENST00000466379 ADAM7Q9H2U9 754 aa14.18□□□□□ -0.14
UBE4B-206ENST00000466379 RABEP2Q9H5N1 569 aa14.18□□□□□ -0.14
UBE4B-206ENST00000466379 NOD1Q9Y239 953 aa14.18□□□□□ -0.14
UBE4B-206ENST00000466379 I3L4J1 428 aa14.18□□□□□ -0.14
UBE4B-206ENST00000466379 DPYSL4O14531 572 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms