RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 NXPE3Q969Y0 559 aa13.09□□□□□ -0.31
CHPF2-202ENST00000465601 ASB16Q96NS5 453 aa13.09□□□□□ -0.31
CHPF2-202ENST00000465601 KXD1Q9BQD3 176 aa13.09□□□□□ -0.31
CHPF2-202ENST00000465601 PLA2G2FQ9BZM2 168 aa13.09□□□□□ -0.31
CHPF2-202ENST00000465601 ZFP14Q9HCL3 533 aa13.09□□□□□ -0.31
CHPF2-202ENST00000465601 ACP6Q9NPH0 428 aa13.09□□□□□ -0.31
CHPF2-202ENST00000465601 EHD2Q9NZN4 543 aa13.09□□□□□ -0.31
CHPF2-202ENST00000465601 TRPM5Q9NZQ8 1165 aa13.09□□□□□ -0.31
CHPF2-202ENST00000465601 CHORDC1Q9UHD1 332 aaPredicted RBP13.09□□□□□ -0.31
CHPF2-202ENST00000465601 TSPAN16Q9UKR8 245 aa13.09□□□□□ -0.31
CHPF2-202ENST00000465601 SORCS3Q9UPU3 1222 aa13.09□□□□□ -0.31
CHPF2-202ENST00000465601 FHOD1Q9Y613 1164 aa13.09□□□□□ -0.31
CHPF2-202ENST00000465601 MYO16Q9Y6X6 1858 aa13.09□□□□□ -0.31
CHPF2-202ENST00000465601 NUP210Q8TEM1 1887 aaPredicted RBP13.08□□□□□ -0.32
CHPF2-202ENST00000465601 PI4K2BG5E9Z4 385 aa13.08□□□□□ -0.32
CHPF2-202ENST00000465601 TULP2O00295 520 aa13.08□□□□□ -0.32
CHPF2-202ENST00000465601 TEX33O43247 280 aa13.08□□□□□ -0.32
CHPF2-202ENST00000465601 CAVIN2O95810 425 aa13.08□□□□□ -0.32
CHPF2-202ENST00000465601 ABL1P00519 1130 aa13.08□□□□□ -0.32
CHPF2-202ENST00000465601 PNMA6AP0CW24 399 aaPredicted RBP13.08□□□□□ -0.32
CHPF2-202ENST00000465601 ALADP13716 330 aa13.08□□□□□ -0.32
CHPF2-202ENST00000465601 UCHL3P15374 230 aa13.08□□□□□ -0.32
CHPF2-202ENST00000465601 FCARP24071 287 aa13.08□□□□□ -0.32
CHPF2-202ENST00000465601 ZXDAP98168 799 aa13.08□□□□□ -0.32
CHPF2-202ENST00000465601 PDE4CQ08493 712 aa13.08□□□□□ -0.32
CHPF2-202ENST00000465601 RAPGEF1Q13905 1077 aa13.08□□□□□ -0.32
CHPF2-202ENST00000465601 DRAP1Q14919 205 aaPredicted RBP13.08□□□□□ -0.32
CHPF2-202ENST00000465601 SYCP1Q15431 976 aa13.08□□□□□ -0.32
CHPF2-202ENST00000465601 CNGA2Q16280 664 aa13.08□□□□□ -0.32
CHPF2-202ENST00000465601 LCLAT1Q6UWP7 414 aa13.08□□□□□ -0.32
CHPF2-202ENST00000465601 MON1AQ86VX9 555 aa13.08□□□□□ -0.32
CHPF2-202ENST00000465601 PCMTD1Q96MG8 357 aaPredicted RBP13.08□□□□□ -0.32
CHPF2-202ENST00000465601 SLITRK1Q96PX8 696 aa13.08□□□□□ -0.32
CHPF2-202ENST00000465601 SMG9Q9H0W8 520 aaKnown RBP13.08□□□□□ -0.32
CHPF2-202ENST00000465601 TRPC7Q9HCX4 862 aa13.08□□□□□ -0.32
CHPF2-202ENST00000465601 FAM207AQ9NSI2 230 aaPredicted RBP13.08□□□□□ -0.32
CHPF2-202ENST00000465601 COMMD8Q9NX08 183 aa13.08□□□□□ -0.32
CHPF2-202ENST00000465601 IL37Q9NZH6 218 aa13.08□□□□□ -0.32
CHPF2-202ENST00000465601 HESX1Q9UBX0 185 aa13.08□□□□□ -0.32
CHPF2-202ENST00000465601 SIK3Q9Y2K2 1263 aa13.08□□□□□ -0.32
CHPF2-202ENST00000465601 C2orf78A6NCI8 922 aa13.07□□□□□ -0.32
CHPF2-202ENST00000465601 ZNF840PA6NDX5 716 aa13.07□□□□□ -0.32
CHPF2-202ENST00000465601 CYP26A1O43174 497 aa13.07□□□□□ -0.32
CHPF2-202ENST00000465601 NARSO43776 548 aaKnown RBP13.07□□□□□ -0.32
CHPF2-202ENST00000465601 ECI2O75521 394 aa13.07□□□□□ -0.32
CHPF2-202ENST00000465601 DDX6P26196 483 aaKnown RBP eCLIP13.07□□□□□ -0.32
CHPF2-202ENST00000465601 KIF11P52732 1056 aa13.07□□□□□ -0.32
CHPF2-202ENST00000465601 BCAT1P54687 386 aa13.07□□□□□ -0.32
CHPF2-202ENST00000465601 SLC8A3P57103 927 aa13.07□□□□□ -0.32
CHPF2-202ENST00000465601 LRSAM1Q6UWE0 723 aa13.07□□□□□ -0.32
CHPF2-202ENST00000465601 PIGZQ86VD9 579 aa13.07□□□□□ -0.32
CHPF2-202ENST00000465601 CMTM8Q8IZV2 173 aa13.07□□□□□ -0.32
CHPF2-202ENST00000465601 ZNF606Q8WXB4 792 aa13.07□□□□□ -0.32
CHPF2-202ENST00000465601 ELSPBP1Q96BH3 223 aa13.07□□□□□ -0.32
CHPF2-202ENST00000465601 RSPRY1Q96DX4 576 aa13.07□□□□□ -0.32
CHPF2-202ENST00000465601 SLC22A12Q96S37 553 aa13.07□□□□□ -0.32
CHPF2-202ENST00000465601 CYP2S1Q96SQ9 504 aa13.07□□□□□ -0.32
CHPF2-202ENST00000465601 NAA15Q9BXJ9 866 aaKnown RBP13.07□□□□□ -0.32
CHPF2-202ENST00000465601 UBXN6Q9BZV1 441 aa13.07□□□□□ -0.32
CHPF2-202ENST00000465601 GANQ9H2C0 597 aa13.07□□□□□ -0.32
CHPF2-202ENST00000465601 TSPY26PQ9H489 355 aa13.07□□□□□ -0.32
CHPF2-202ENST00000465601 FBXO44Q9H4M3 255 aa13.07□□□□□ -0.32
CHPF2-202ENST00000465601 TRPV4Q9HBA0 871 aa13.07□□□□□ -0.32
CHPF2-202ENST00000465601 PNPLA8Q9NP80 782 aa13.07□□□□□ -0.32
CHPF2-202ENST00000465601 PLCB1Q9NQ66 1216 aa13.07□□□□□ -0.32
CHPF2-202ENST00000465601 RTN4Q9NQC3 1192 aaKnown RBP13.07□□□□□ -0.32
CHPF2-202ENST00000465601 GMIPQ9P107 970 aa13.07□□□□□ -0.32
CHPF2-202ENST00000465601 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.07□□□□□ -0.32
CHPF2-202ENST00000465601 MYOFQ9NZM1 2061 aa13.06□□□□□ -0.32
CHPF2-202ENST00000465601 TRAV19A0A0A6YYK7 116 aa13.06□□□□□ -0.32
CHPF2-202ENST00000465601 FAM92AA1XBS5 289 aa13.06□□□□□ -0.32
CHPF2-202ENST00000465601 HEPACAM2A8MVW5 462 aa13.06□□□□□ -0.32
CHPF2-202ENST00000465601 GOLGA6L19H0YKK7 550 aa13.06□□□□□ -0.32
CHPF2-202ENST00000465601 M0QYV0 167 aa13.06□□□□□ -0.32
CHPF2-202ENST00000465601 DPYSL4O14531 572 aa13.06□□□□□ -0.32
CHPF2-202ENST00000465601 XPO1O14980 1071 aaKnown RBP13.06□□□□□ -0.32
CHPF2-202ENST00000465601 EPHB6O15197 1021 aa13.06□□□□□ -0.32
CHPF2-202ENST00000465601 THAP12O43422 761 aa13.06□□□□□ -0.32
CHPF2-202ENST00000465601 PRAMEF12O95522 483 aa13.06□□□□□ -0.32
CHPF2-202ENST00000465601 SERPINC1P01008 464 aa13.06□□□□□ -0.32
CHPF2-202ENST00000465601 HDCP19113 662 aa13.06□□□□□ -0.32
CHPF2-202ENST00000465601 GNA15P30679 374 aa13.06□□□□□ -0.32
CHPF2-202ENST00000465601 CLCN1P35523 988 aa13.06□□□□□ -0.32
CHPF2-202ENST00000465601 AVPR1AP37288 418 aa13.06□□□□□ -0.32
CHPF2-202ENST00000465601 PPP3CCP48454 512 aa13.06□□□□□ -0.32
CHPF2-202ENST00000465601 PGFP49763 221 aa13.06□□□□□ -0.32
CHPF2-202ENST00000465601 POLR2FP61218 127 aaKnown RBP13.06□□□□□ -0.32
CHPF2-202ENST00000465601 TPM4P67936 248 aa13.06□□□□□ -0.32
CHPF2-202ENST00000465601 GPC5P78333 572 aa13.06□□□□□ -0.32
CHPF2-202ENST00000465601 BST2Q10589 180 aaKnown RBP13.06□□□□□ -0.32
CHPF2-202ENST00000465601 GRM2Q14416 872 aa13.06□□□□□ -0.32
CHPF2-202ENST00000465601 STILQ15468 1287 aa13.06□□□□□ -0.32
CHPF2-202ENST00000465601 FILIP1LQ4L180 1135 aa13.06□□□□□ -0.32
CHPF2-202ENST00000465601 PKDCCQ504Y2 493 aa13.06□□□□□ -0.32
CHPF2-202ENST00000465601 VITQ6UXI7 678 aa13.06□□□□□ -0.32
CHPF2-202ENST00000465601 FAM71AQ8IYT1 594 aa13.06□□□□□ -0.32
CHPF2-202ENST00000465601 ARL14EPQ8N8R7 260 aaPredicted RBP13.06□□□□□ -0.32
CHPF2-202ENST00000465601 EDAQ92838 391 aa13.06□□□□□ -0.32
CHPF2-202ENST00000465601 SECISBP2LQ93073 1101 aaKnown RBP13.06□□□□□ -0.32
CHPF2-202ENST00000465601 NAP1L5Q96NT1 182 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms