RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 ELP3Q9H9T3 547 aa19.15■□□□□ 0.66
SYNE4-204ENST00000465425 CHMP2BQ9UQN3 213 aa19.15■□□□□ 0.66
SYNE4-204ENST00000465425 CHKBQ9Y259 395 aa19.15■□□□□ 0.66
SYNE4-204ENST00000465425 TM9SF1O15321 606 aa19.14■□□□□ 0.66
SYNE4-204ENST00000465425 CNMDO75829 334 aa19.14■□□□□ 0.66
SYNE4-204ENST00000465425 ALADP13716 330 aa19.14■□□□□ 0.66
SYNE4-204ENST00000465425 GPD1P21695 349 aa19.14■□□□□ 0.66
SYNE4-204ENST00000465425 FAM47CQ5HY64 1035 aa19.14■□□□□ 0.66
SYNE4-204ENST00000465425 AGAP11Q8TF27 550 aa19.14■□□□□ 0.66
SYNE4-204ENST00000465425 FGD4Q96M96 766 aa19.14■□□□□ 0.66
SYNE4-204ENST00000465425 CNPY3Q9BT09 278 aa19.14■□□□□ 0.66
SYNE4-204ENST00000465425 DHRS4Q9BTZ2 278 aa19.14■□□□□ 0.66
SYNE4-204ENST00000465425 MIS12Q9H081 205 aa19.14■□□□□ 0.66
SYNE4-204ENST00000465425 IFT122Q9HBG6 1241 aa19.14■□□□□ 0.66
SYNE4-204ENST00000465425 PTPRFP10586 1907 aa19.14■□□□□ 0.65
SYNE4-204ENST00000465425 GOLGA8RI6L899 631 aa19.14■□□□□ 0.65
SYNE4-204ENST00000465425 PRPSAP2O60256 369 aa19.14■□□□□ 0.65
SYNE4-204ENST00000465425 PDGFRAP16234 1089 aa19.14■□□□□ 0.65
SYNE4-204ENST00000465425 TSHRP16473 764 aa19.14■□□□□ 0.65
SYNE4-204ENST00000465425 ADRA1DP25100 572 aa19.14■□□□□ 0.65
SYNE4-204ENST00000465425 MMRN1Q13201 1228 aa19.14■□□□□ 0.65
SYNE4-204ENST00000465425 TFDP2Q14188 446 aa19.14■□□□□ 0.65
SYNE4-204ENST00000465425 TTLL4Q14679 1199 aa19.14■□□□□ 0.65
SYNE4-204ENST00000465425 OR6B2Q6IFH4 312 aa19.14■□□□□ 0.65
SYNE4-204ENST00000465425 CCDC62Q6P9F0 684 aa19.14■□□□□ 0.65
SYNE4-204ENST00000465425 NPNTQ6UXI9 565 aa19.14■□□□□ 0.65
SYNE4-204ENST00000465425 TCP10LQ8TDR4 215 aa19.14■□□□□ 0.65
SYNE4-204ENST00000465425 MYCBPQ99417 103 aaPredicted RBP19.14■□□□□ 0.65
SYNE4-204ENST00000465425 RNPEPQ9H4A4 650 aa19.14■□□□□ 0.65
SYNE4-204ENST00000465425 VRTNQ9H8Y1 702 aa19.14■□□□□ 0.65
SYNE4-204ENST00000465425 L3MBTL1Q9Y468 752 aa19.14■□□□□ 0.65
SYNE4-204ENST00000465425 A0A087WZ62 844 aa19.13■□□□□ 0.65
SYNE4-204ENST00000465425 H7C0C1 242 aa19.13■□□□□ 0.65
SYNE4-204ENST00000465425 PIK3R2O00459 728 aa19.13■□□□□ 0.65
SYNE4-204ENST00000465425 C22orf31O95567 290 aa19.13■□□□□ 0.65
SYNE4-204ENST00000465425 ATP5OP48047 213 aa19.13■□□□□ 0.65
SYNE4-204ENST00000465425 NRLP54845 237 aa19.13■□□□□ 0.65
SYNE4-204ENST00000465425 TMEM132DQ14C87 1099 aa19.13■□□□□ 0.65
SYNE4-204ENST00000465425 NOMO1Q15155 1222 aa19.13■□□□□ 0.65
SYNE4-204ENST00000465425 CDO1Q16878 200 aa19.13■□□□□ 0.65
SYNE4-204ENST00000465425 GPATCH11Q8N954 259 aa19.13■□□□□ 0.65
SYNE4-204ENST00000465425 DCAKDQ8WVC6 231 aa19.13■□□□□ 0.65
SYNE4-204ENST00000465425 CPB2Q96IY4 423 aa19.13■□□□□ 0.65
SYNE4-204ENST00000465425 PEBP4Q96S96 227 aa19.13■□□□□ 0.65
SYNE4-204ENST00000465425 FDXACB1Q9BRP7 624 aaPredicted RBP19.13■□□□□ 0.65
SYNE4-204ENST00000465425 TXNRD2Q9NNW7 524 aa19.13■□□□□ 0.65
SYNE4-204ENST00000465425 BARX2Q9UMQ3 279 aaPredicted RBP19.13■□□□□ 0.65
SYNE4-204ENST00000465425 AKT3Q9Y243 479 aa19.13■□□□□ 0.65
SYNE4-204ENST00000465425 LRRC37A2A6NM11 1700 aa19.13■□□□□ 0.65
SYNE4-204ENST00000465425 IQANK1A0A1B0GTG1 560 aa19.13■□□□□ 0.65
SYNE4-204ENST00000465425 WDR91A4D1P6 747 aa19.13■□□□□ 0.65
SYNE4-204ENST00000465425 TROVE2P10155 538 aaKnown RBP eCLIP19.13■□□□□ 0.65
SYNE4-204ENST00000465425 TARSP26639 723 aaKnown RBP19.13■□□□□ 0.65
SYNE4-204ENST00000465425 ELK3P41970 407 aa19.13■□□□□ 0.65
SYNE4-204ENST00000465425 IREB2P48200 963 aaKnown RBP19.13■□□□□ 0.65
SYNE4-204ENST00000465425 KRT81Q14533 505 aa19.13■□□□□ 0.65
SYNE4-204ENST00000465425 SH3PXD2AQ5TCZ1 1133 aa19.13■□□□□ 0.65
SYNE4-204ENST00000465425 OTOAQ7RTW8 1153 aa19.13■□□□□ 0.65
SYNE4-204ENST00000465425 MAP7D3Q8IWC1 876 aa19.13■□□□□ 0.65
SYNE4-204ENST00000465425 SULF1Q8IWU6 871 aa19.13■□□□□ 0.65
SYNE4-204ENST00000465425 PLCD3Q8N3E9 789 aa19.13■□□□□ 0.65
SYNE4-204ENST00000465425 RXFP2Q8WXD0 754 aa19.13■□□□□ 0.65
SYNE4-204ENST00000465425 ANK1P16157 1881 aa19.13■□□□□ 0.65
SYNE4-204ENST00000465425 A8MUI8 341 aa19.12■□□□□ 0.65
SYNE4-204ENST00000465425 MT-ND3P03897 115 aa19.12■□□□□ 0.65
SYNE4-204ENST00000465425 CCND1P24385 295 aa19.12■□□□□ 0.65
SYNE4-204ENST00000465425 NDST1P52848 882 aa19.12■□□□□ 0.65
SYNE4-204ENST00000465425 FAM187BQ17R55 369 aa19.12■□□□□ 0.65
SYNE4-204ENST00000465425 CXorf38Q8TB03 319 aa19.12■□□□□ 0.65
SYNE4-204ENST00000465425 C10orf82Q8WW14 230 aa19.12■□□□□ 0.65
SYNE4-204ENST00000465425 FAF2Q96CS3 445 aa19.12■□□□□ 0.65
SYNE4-204ENST00000465425 STAMBPL1Q96FJ0 436 aa19.12■□□□□ 0.65
SYNE4-204ENST00000465425 KLF6Q99612 283 aaPredicted RBP19.12■□□□□ 0.65
SYNE4-204ENST00000465425 PDZD7Q9H5P4 517 aa19.12■□□□□ 0.65
SYNE4-204ENST00000465425 NPHS2Q9NP85 383 aa19.12■□□□□ 0.65
SYNE4-204ENST00000465425 TSPAN16Q9UKR8 245 aa19.12■□□□□ 0.65
SYNE4-204ENST00000465425 C2CD4BA6NLJ0 364 aa19.12■□□□□ 0.65
SYNE4-204ENST00000465425 E5RJQ4 531 aa19.12■□□□□ 0.65
SYNE4-204ENST00000465425 INHBAP08476 426 aa19.12■□□□□ 0.65
SYNE4-204ENST00000465425 INSRRP14616 1297 aa19.12■□□□□ 0.65
SYNE4-204ENST00000465425 RASSF2P50749 326 aa19.12■□□□□ 0.65
SYNE4-204ENST00000465425 YWHAGP61981 247 aaKnown RBP eCLIP19.12■□□□□ 0.65
SYNE4-204ENST00000465425 POU5F1BQ06416 359 aa19.12■□□□□ 0.65
SYNE4-204ENST00000465425 PTK7Q13308 1070 aa19.12■□□□□ 0.65
SYNE4-204ENST00000465425 C15orf59Q2T9L4 293 aaPredicted RBP19.12■□□□□ 0.65
SYNE4-204ENST00000465425 Q3C1V9 767 aa19.12■□□□□ 0.65
SYNE4-204ENST00000465425 SYCP2LQ5T4T6 812 aa19.12■□□□□ 0.65
SYNE4-204ENST00000465425 BANPQ8N9N5 519 aa19.12■□□□□ 0.65
SYNE4-204ENST00000465425 MZB1Q8WU39 189 aa19.12■□□□□ 0.65
SYNE4-204ENST00000465425 DCPSQ96C86 337 aaKnown RBP19.12■□□□□ 0.65
SYNE4-204ENST00000465425 DNAJC25-GNG10A0A024R161 153 aa19.11■□□□□ 0.65
SYNE4-204ENST00000465425 KBTBD13C9JR72 458 aa19.11■□□□□ 0.65
SYNE4-204ENST00000465425 GRAP2O75791 330 aa19.11■□□□□ 0.65
SYNE4-204ENST00000465425 FGFR1P11362 822 aa19.11■□□□□ 0.65
SYNE4-204ENST00000465425 ZNF200P98182 395 aaPredicted RBP19.11■□□□□ 0.65
SYNE4-204ENST00000465425 KYAT1Q16773 422 aa19.11■□□□□ 0.65
SYNE4-204ENST00000465425 SLC10A6Q3KNW5 377 aa19.11■□□□□ 0.65
SYNE4-204ENST00000465425 ZNF484Q5JVG2 852 aa19.11■□□□□ 0.65
SYNE4-204ENST00000465425 MAP1SQ66K74 1059 aaPredicted RBP19.11■□□□□ 0.65
SYNE4-204ENST00000465425 SCYL2Q6P3W7 929 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms