RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 SLC10A4Q96EP9 437 aa19.56■□□□□ 0.72
TSPAN4-210ENST00000464987 MAGEB18Q96M61 343 aa19.56■□□□□ 0.72
TSPAN4-210ENST00000464987 TRABDQ9H4I3 376 aa19.56■□□□□ 0.72
TSPAN4-210ENST00000464987 CDHR5Q9HBB8 845 aa19.56■□□□□ 0.72
TSPAN4-210ENST00000464987 FAM49BQ9NUQ9 324 aa19.56■□□□□ 0.72
TSPAN4-210ENST00000464987 GPATCH2LQ9NWQ4 482 aa19.56■□□□□ 0.72
TSPAN4-210ENST00000464987 SNTG2Q9NY99 539 aa19.56■□□□□ 0.72
TSPAN4-210ENST00000464987 RABGEF1Q9UJ41 708 aa19.56■□□□□ 0.72
TSPAN4-210ENST00000464987 SLC12A4Q9UP95 1085 aa19.56■□□□□ 0.72
TSPAN4-210ENST00000464987 RBM47A0AV96 593 aaKnown RBP19.56■□□□□ 0.72
TSPAN4-210ENST00000464987 MAP3K6O95382 1288 aa19.56■□□□□ 0.72
TSPAN4-210ENST00000464987 NPTXRO95502 500 aa19.56■□□□□ 0.72
TSPAN4-210ENST00000464987 CHRM1P11229 460 aaPredicted RBP19.56■□□□□ 0.72
TSPAN4-210ENST00000464987 BASP1P80723 227 aaKnown RBP19.56■□□□□ 0.72
TSPAN4-210ENST00000464987 GLRA4Q5JXX5 417 aa19.56■□□□□ 0.72
TSPAN4-210ENST00000464987 FAM47EQ6ZV65 393 aa19.56■□□□□ 0.72
TSPAN4-210ENST00000464987 ACOT1Q86TX2 421 aa19.56■□□□□ 0.72
TSPAN4-210ENST00000464987 TTC30AQ86WT1 665 aa19.56■□□□□ 0.72
TSPAN4-210ENST00000464987 FUKQ8N0W3 1084 aa19.56■□□□□ 0.72
TSPAN4-210ENST00000464987 P3H4Q92791 437 aa19.56■□□□□ 0.72
TSPAN4-210ENST00000464987 NT5C1AQ9BXI3 368 aa19.56■□□□□ 0.72
TSPAN4-210ENST00000464987 KLC4Q9NSK0 619 aa19.56■□□□□ 0.72
TSPAN4-210ENST00000464987 SETD4Q9NVD3 440 aa19.56■□□□□ 0.72
TSPAN4-210ENST00000464987 RALGAPA2Q2PPJ7 1873 aa19.55■□□□□ 0.72
TSPAN4-210ENST00000464987 ENDOD1O94919 500 aa19.55■□□□□ 0.72
TSPAN4-210ENST00000464987 UBOX5O94941 541 aa19.55■□□□□ 0.72
TSPAN4-210ENST00000464987 ASMTLO95671 621 aa19.55■□□□□ 0.72
TSPAN4-210ENST00000464987 DPYSL3Q14195 570 aa19.55■□□□□ 0.72
TSPAN4-210ENST00000464987 PCGF5Q86SE9 256 aa19.55■□□□□ 0.72
TSPAN4-210ENST00000464987 FBXO36Q8NEA4 188 aa19.55■□□□□ 0.72
TSPAN4-210ENST00000464987 PYROXD1Q8WU10 500 aa19.55■□□□□ 0.72
TSPAN4-210ENST00000464987 MAK16Q9BXY0 300 aaKnown RBP19.55■□□□□ 0.72
TSPAN4-210ENST00000464987 EIF2AQ9BY44 585 aaKnown RBP19.55■□□□□ 0.72
TSPAN4-210ENST00000464987 GBA2Q9HCG7 927 aaPredicted RBP19.55■□□□□ 0.72
TSPAN4-210ENST00000464987 TUBGCP4Q9UGJ1 667 aa19.55■□□□□ 0.72
TSPAN4-210ENST00000464987 GJD2Q9UKL4 321 aa19.55■□□□□ 0.72
TSPAN4-210ENST00000464987 PNMA3Q9UL41 463 aa19.55■□□□□ 0.72
TSPAN4-210ENST00000464987 SNX9Q9Y5X1 595 aa19.55■□□□□ 0.72
TSPAN4-210ENST00000464987 COL1A2P08123 1366 aa19.55■□□□□ 0.72
TSPAN4-210ENST00000464987 BTBD19C9JJ37 291 aa19.55■□□□□ 0.72
TSPAN4-210ENST00000464987 HGSO14964 777 aaPredicted RBP19.55■□□□□ 0.72
TSPAN4-210ENST00000464987 GABBR2O75899 941 aa19.55■□□□□ 0.72
TSPAN4-210ENST00000464987 MMP3P08254 477 aa19.55■□□□□ 0.72
TSPAN4-210ENST00000464987 HOXA11P31270 313 aaPredicted RBP19.55■□□□□ 0.72
TSPAN4-210ENST00000464987 RPA3P35244 121 aaPredicted RBP19.55■□□□□ 0.72
TSPAN4-210ENST00000464987 PCK1P35558 622 aa19.55■□□□□ 0.72
TSPAN4-210ENST00000464987 MGAT5Q09328 741 aa19.55■□□□□ 0.72
TSPAN4-210ENST00000464987 CCDC14Q49A88 953 aa19.55■□□□□ 0.72
TSPAN4-210ENST00000464987 ZC3H12AQ5D1E8 599 aaKnown RBP19.55■□□□□ 0.72
TSPAN4-210ENST00000464987 SPATA21Q7Z572 469 aa19.55■□□□□ 0.72
TSPAN4-210ENST00000464987 DENND1AQ8TEH3 1009 aa19.55■□□□□ 0.72
TSPAN4-210ENST00000464987 EMID1Q96A84 441 aaPredicted RBP19.55■□□□□ 0.72
TSPAN4-210ENST00000464987 CNPY3Q9BT09 278 aa19.55■□□□□ 0.72
TSPAN4-210ENST00000464987 B3GNT5Q9BYG0 378 aa19.55■□□□□ 0.72
TSPAN4-210ENST00000464987 FAM49AQ9H0Q0 323 aaPredicted RBP19.55■□□□□ 0.72
TSPAN4-210ENST00000464987 YY1AP1Q9H869 796 aa19.55■□□□□ 0.72
TSPAN4-210ENST00000464987 XPO7Q9UIA9 1087 aaKnown RBP19.55■□□□□ 0.72
TSPAN4-210ENST00000464987 MCF2LO15068 1137 aa19.54■□□□□ 0.72
TSPAN4-210ENST00000464987 ACAP1Q15027 740 aa19.54■□□□□ 0.72
TSPAN4-210ENST00000464987 BBS9Q3SYG4 887 aa19.54■□□□□ 0.72
TSPAN4-210ENST00000464987 SCYL2Q6P3W7 929 aa19.54■□□□□ 0.72
TSPAN4-210ENST00000464987 C1orf228Q6PIY5 440 aa19.54■□□□□ 0.72
TSPAN4-210ENST00000464987 C3orf62Q6ZUJ4 267 aa19.54■□□□□ 0.72
TSPAN4-210ENST00000464987 IGDCC3Q8IVU1 814 aa19.54■□□□□ 0.72
TSPAN4-210ENST00000464987 ZC3H15Q8WU90 426 aaKnown RBP19.54■□□□□ 0.72
TSPAN4-210ENST00000464987 C18orf25Q96B23 403 aaPredicted RBP19.54■□□□□ 0.72
TSPAN4-210ENST00000464987 THOC1Q96FV9 657 aaKnown RBP19.54■□□□□ 0.72
TSPAN4-210ENST00000464987 RMDN2Q96LZ7 410 aa19.54■□□□□ 0.72
TSPAN4-210ENST00000464987 RSAD1Q9HA92 442 aa19.54■□□□□ 0.72
TSPAN4-210ENST00000464987 ZMYND8Q9ULU4 1186 aaPredicted RBP19.54■□□□□ 0.72
TSPAN4-210ENST00000464987 ZNF638Q14966 1978 aaKnown RBP19.54■□□□□ 0.72
TSPAN4-210ENST00000464987 DNAJC8O75937 253 aaPredicted RBP19.53■□□□□ 0.72
TSPAN4-210ENST00000464987 TFE3P19532 575 aaPredicted RBP19.53■□□□□ 0.72
TSPAN4-210ENST00000464987 IL4RP24394 825 aa19.53■□□□□ 0.72
TSPAN4-210ENST00000464987 GRM5P41594 1212 aa19.53■□□□□ 0.72
TSPAN4-210ENST00000464987 ARL4CP56559 192 aa19.53■□□□□ 0.72
TSPAN4-210ENST00000464987 XRCC4Q13426 336 aa19.53■□□□□ 0.72
TSPAN4-210ENST00000464987 SLC1A5Q15758 541 aa19.53■□□□□ 0.72
TSPAN4-210ENST00000464987 EFHC2Q5JST6 749 aa19.53■□□□□ 0.72
TSPAN4-210ENST00000464987 PPP1R21Q6ZMI0 780 aa19.53■□□□□ 0.72
TSPAN4-210ENST00000464987 SCUBE3Q8IX30 993 aa19.53■□□□□ 0.72
TSPAN4-210ENST00000464987 FBF1Q8TES7 1133 aa19.53■□□□□ 0.72
TSPAN4-210ENST00000464987 KHSRPQ92945 711 aaKnown RBP eCLIP19.53■□□□□ 0.72
TSPAN4-210ENST00000464987 MS4A4AQ96JQ5 239 aa19.53■□□□□ 0.72
TSPAN4-210ENST00000464987 CCNA1P78396 465 aa19.53■□□□□ 0.72
TSPAN4-210ENST00000464987 NOMO1Q15155 1222 aa19.53■□□□□ 0.72
TSPAN4-210ENST00000464987 CA9Q16790 459 aa19.53■□□□□ 0.72
TSPAN4-210ENST00000464987 CYB5D1Q6P9G0 228 aa19.53■□□□□ 0.72
TSPAN4-210ENST00000464987 DARS2Q6PI48 645 aaKnown RBP19.53■□□□□ 0.72
TSPAN4-210ENST00000464987 OLFML1Q6UWY5 402 aa19.53■□□□□ 0.72
TSPAN4-210ENST00000464987 SUGP1Q8IWZ8 645 aaKnown RBP19.53■□□□□ 0.72
TSPAN4-210ENST00000464987 SGSM3Q96HU1 749 aa19.53■□□□□ 0.72
TSPAN4-210ENST00000464987 FRMD8P1Q9BZ68 369 aaPredicted RBP19.53■□□□□ 0.72
TSPAN4-210ENST00000464987 MAGEB5Q9BZ81 275 aa19.53■□□□□ 0.72
TSPAN4-210ENST00000464987 DPEP3Q9H4B8 488 aa19.53■□□□□ 0.72
TSPAN4-210ENST00000464987 NGRNQ9NPE2 291 aaKnown RBP19.53■□□□□ 0.72
TSPAN4-210ENST00000464987 PRKAG3Q9UGI9 489 aa19.53■□□□□ 0.72
TSPAN4-210ENST00000464987 PDCD11Q14690 1871 aaKnown RBP19.53■□□□□ 0.72
TSPAN4-210ENST00000464987 E7ESA3 106 aa19.52■□□□□ 0.72
TSPAN4-210ENST00000464987 SUN1O94901 812 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms