RNA–Protein interactions for RNA: ENST00000464812.1

NUDCD3-204, Transcript of NudC domain containing 3, humanhuman

TSL 5

Gene NUDCD3, Length 811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-204ENST00000464812 E5RJQ4 531 aa9.47□□□□□ -0.89
NUDCD3-204ENST00000464812 F8VP50 259 aa9.47□□□□□ -0.89
NUDCD3-204ENST00000464812 H3BQ06 376 aaPredicted RBP9.47□□□□□ -0.89
NUDCD3-204ENST00000464812 XPO1O14980 1071 aaKnown RBP9.47□□□□□ -0.89
NUDCD3-204ENST00000464812 GJB6O95452 261 aa9.47□□□□□ -0.89
NUDCD3-204ENST00000464812 CXCL14O95715 111 aa9.47□□□□□ -0.89
NUDCD3-204ENST00000464812 SPATA31D3P0C874 917 aa9.47□□□□□ -0.89
NUDCD3-204ENST00000464812 SETSIPP0DME0 302 aa9.47□□□□□ -0.89
NUDCD3-204ENST00000464812 ABCB4P21439 1286 aa9.47□□□□□ -0.89
NUDCD3-204ENST00000464812 MMP8P22894 467 aa9.47□□□□□ -0.89
NUDCD3-204ENST00000464812 CYLC1P35663 651 aaPredicted RBP9.47□□□□□ -0.89
NUDCD3-204ENST00000464812 PLA2G4AP47712 749 aa9.47□□□□□ -0.89
NUDCD3-204ENST00000464812 RPL34P49207 117 aaKnown RBP9.47□□□□□ -0.89
NUDCD3-204ENST00000464812 ADCY1Q08828 1119 aa9.47□□□□□ -0.89
NUDCD3-204ENST00000464812 DUSP4Q13115 394 aa9.47□□□□□ -0.89
NUDCD3-204ENST00000464812 ADAM15Q13444 863 aa9.47□□□□□ -0.89
NUDCD3-204ENST00000464812 MAPRE1Q15691 268 aaKnown RBP9.47□□□□□ -0.89
NUDCD3-204ENST00000464812 NFE2Q16621 373 aaPredicted RBP9.47□□□□□ -0.89
NUDCD3-204ENST00000464812 DDR2Q16832 855 aa9.47□□□□□ -0.89
NUDCD3-204ENST00000464812 CCDC122Q5T0U0 273 aa9.47□□□□□ -0.89
NUDCD3-204ENST00000464812 LILRA6Q6PI73 481 aa9.47□□□□□ -0.89
NUDCD3-204ENST00000464812 TRIM72Q6ZMU5 477 aa9.47□□□□□ -0.89
NUDCD3-204ENST00000464812 C4orf50Q6ZRC1 276 aa9.47□□□□□ -0.89
NUDCD3-204ENST00000464812 MMS22LQ6ZRQ5 1243 aa9.47□□□□□ -0.89
NUDCD3-204ENST00000464812 SPATA31D4Q6ZUB0 917 aa9.47□□□□□ -0.89
NUDCD3-204ENST00000464812 RBM23Q86U06 439 aaKnown RBP9.47□□□□□ -0.89
NUDCD3-204ENST00000464812 PIGZQ86VD9 579 aa9.47□□□□□ -0.89
NUDCD3-204ENST00000464812 PHF13Q86YI8 300 aaPredicted RBP9.47□□□□□ -0.89
NUDCD3-204ENST00000464812 GPR65Q8IYL9 337 aa9.47□□□□□ -0.89
NUDCD3-204ENST00000464812 MRPL43Q8N983 215 aaKnown RBP9.47□□□□□ -0.89
NUDCD3-204ENST00000464812 TMEM35BQ8NCS4 154 aa9.47□□□□□ -0.89
NUDCD3-204ENST00000464812 GPR152Q8TDT2 470 aa9.47□□□□□ -0.89
NUDCD3-204ENST00000464812 CLEC4CQ8WTT0 213 aa9.47□□□□□ -0.89
NUDCD3-204ENST00000464812 KHSRPQ92945 711 aaKnown RBP eCLIP9.47□□□□□ -0.896e-6■□□□□ 8.1
NUDCD3-204ENST00000464812 FUBP3Q96I24 572 aaKnown RBP eCLIP9.47□□□□□ -0.89
NUDCD3-204ENST00000464812 SEPT5Q99719 369 aaPredicted RBP9.47□□□□□ -0.89
NUDCD3-204ENST00000464812 SLC4A5Q9BY07 1137 aa9.47□□□□□ -0.89
NUDCD3-204ENST00000464812 OXCT2Q9BYC2 517 aaPredicted RBP9.47□□□□□ -0.89
NUDCD3-204ENST00000464812 LACRTQ9GZZ8 138 aa9.47□□□□□ -0.89
NUDCD3-204ENST00000464812 THAP2Q9H0W7 228 aa9.47□□□□□ -0.89
NUDCD3-204ENST00000464812 PDCL3Q9H2J4 239 aa9.47□□□□□ -0.89
NUDCD3-204ENST00000464812 ABCB6Q9NP58 842 aa9.47□□□□□ -0.89
NUDCD3-204ENST00000464812 DMAP1Q9NPF5 467 aaPredicted RBP9.47□□□□□ -0.89
NUDCD3-204ENST00000464812 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.47□□□□□ -0.89
NUDCD3-204ENST00000464812 AFF4Q9UHB7 1163 aaKnown RBP9.47□□□□□ -0.89
NUDCD3-204ENST00000464812 FBXW11Q9UKB1 542 aa9.47□□□□□ -0.89
NUDCD3-204ENST00000464812 YIPF1Q9Y548 306 aa9.47□□□□□ -0.89
NUDCD3-204ENST00000464812 PCDHB5Q9Y5E4 795 aa9.47□□□□□ -0.89
NUDCD3-204ENST00000464812 PCDHA13Q9Y5I0 950 aa9.47□□□□□ -0.89
NUDCD3-204ENST00000464812 TCRBV5S1A1TA0A578 114 aa9.46□□□□□ -0.9
NUDCD3-204ENST00000464812 TNFRSF10BO14763 440 aa9.46□□□□□ -0.9
NUDCD3-204ENST00000464812 TGM5O43548 720 aa9.46□□□□□ -0.9
NUDCD3-204ENST00000464812 CLASP2O75122 1294 aaKnown RBP9.46□□□□□ -0.9
NUDCD3-204ENST00000464812 RTN2O75298 545 aa9.46□□□□□ -0.9
NUDCD3-204ENST00000464812 FTLP02792 175 aaPredicted RBP9.46□□□□□ -0.9
NUDCD3-204ENST00000464812 HAPLN1P10915 354 aaPredicted RBP9.46□□□□□ -0.9
NUDCD3-204ENST00000464812 GZMAP12544 262 aa9.46□□□□□ -0.9
NUDCD3-204ENST00000464812 IL9P15248 144 aa9.46□□□□□ -0.9
NUDCD3-204ENST00000464812 RRM1P23921 792 aa9.46□□□□□ -0.9
NUDCD3-204ENST00000464812 ARHGAP25P42331 645 aa9.46□□□□□ -0.9
NUDCD3-204ENST00000464812 NSFP46459 744 aaKnown RBP9.46□□□□□ -0.9
NUDCD3-204ENST00000464812 NRIP1P48552 1158 aa9.46□□□□□ -0.9
NUDCD3-204ENST00000464812 CLCN4P51793 760 aa9.46□□□□□ -0.9
NUDCD3-204ENST00000464812 VAV2P52735 878 aa9.46□□□□□ -0.9
NUDCD3-204ENST00000464812 GALCP54803 685 aa9.46□□□□□ -0.9
NUDCD3-204ENST00000464812 USP46P62068 366 aa9.46□□□□□ -0.9
NUDCD3-204ENST00000464812 CREMQ03060 361 aa9.46□□□□□ -0.9
NUDCD3-204ENST00000464812 ADIGQ0VDE8 80 aa9.46□□□□□ -0.9
NUDCD3-204ENST00000464812 DUSP6Q16828 381 aa9.46□□□□□ -0.9
NUDCD3-204ENST00000464812 FAM183BPQ6ZVS7 135 aa9.46□□□□□ -0.9
NUDCD3-204ENST00000464812 BHLHA9Q7RTU4 235 aa9.46□□□□□ -0.9
NUDCD3-204ENST00000464812 VPS36Q86VN1 386 aa9.46□□□□□ -0.9
NUDCD3-204ENST00000464812 MCOLN2Q8IZK6 566 aa9.46□□□□□ -0.9
NUDCD3-204ENST00000464812 ZNF461Q8TAF7 563 aa9.46□□□□□ -0.9
NUDCD3-204ENST00000464812 SPPL2BQ8TCT7 592 aa9.46□□□□□ -0.9
NUDCD3-204ENST00000464812 PABPC5Q96DU9 382 aaKnown RBP9.46□□□□□ -0.9
NUDCD3-204ENST00000464812 THEGQ9P2T0 379 aa9.46□□□□□ -0.9
NUDCD3-204ENST00000464812 HESX1Q9UBX0 185 aa9.46□□□□□ -0.9
NUDCD3-204ENST00000464812 STK39Q9UEW8 545 aa9.46□□□□□ -0.9
NUDCD3-204ENST00000464812 SALL4Q9UJQ4 1053 aa9.46□□□□□ -0.9
NUDCD3-204ENST00000464812 COG5Q9UP83 839 aa9.46□□□□□ -0.9
NUDCD3-204ENST00000464812 ZKSCAN5Q9Y2L8 839 aa9.46□□□□□ -0.9
NUDCD3-204ENST00000464812 PPP2R2CQ9Y2T4 447 aa9.46□□□□□ -0.9
NUDCD3-204ENST00000464812 DUSP10Q9Y6W6 482 aa9.46□□□□□ -0.9
NUDCD3-204ENST00000464812 ATP8B3O60423 1300 aa9.46□□□□□ -0.9
NUDCD3-204ENST00000464812 NRG2O14511 850 aaPredicted RBP9.45□□□□□ -0.9
NUDCD3-204ENST00000464812 PAPSS1O43252 624 aaPredicted RBP9.45□□□□□ -0.9
NUDCD3-204ENST00000464812 ADH1AP07327 375 aa9.45□□□□□ -0.9
NUDCD3-204ENST00000464812 LCP1P13796 627 aa9.45□□□□□ -0.9
NUDCD3-204ENST00000464812 ATF2P15336 505 aa9.45□□□□□ -0.9
NUDCD3-204ENST00000464812 EPCAMP16422 314 aa9.45□□□□□ -0.9
NUDCD3-204ENST00000464812 KCNA5P22460 613 aa9.45□□□□□ -0.9
NUDCD3-204ENST00000464812 MAGEA1P43355 309 aa9.45□□□□□ -0.9
NUDCD3-204ENST00000464812 MAGEA11P43364 429 aa9.45□□□□□ -0.9
NUDCD3-204ENST00000464812 GABRB2P47870 512 aa9.45□□□□□ -0.9
NUDCD3-204ENST00000464812 PGFP49763 221 aa9.45□□□□□ -0.9
NUDCD3-204ENST00000464812 NUBP1P53384 320 aa9.45□□□□□ -0.9
NUDCD3-204ENST00000464812 SLC5A3P53794 718 aa9.45□□□□□ -0.9
NUDCD3-204ENST00000464812 GSCP56915 257 aaPredicted RBP9.45□□□□□ -0.9
NUDCD3-204ENST00000464812 MTMR3Q13615 1198 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms