RNA–Protein interactions for RNA: ENST00000464435.1

USP25-207, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 3

Gene USP25, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-207ENST00000464435 NEU2Q9Y3R4 380 aa5.59□□□□□ -1.51
USP25-207ENST00000464435 CDY1Q9Y6F8 540 aa5.59□□□□□ -1.51
USP25-207ENST00000464435 GOLGA6L3A6NEY3 463 aa5.58□□□□□ -1.52
USP25-207ENST00000464435 ACKR2O00590 384 aa5.58□□□□□ -1.52
USP25-207ENST00000464435 TRIM38O00635 465 aa5.58□□□□□ -1.52
USP25-207ENST00000464435 NPC1O15118 1278 aa5.58□□□□□ -1.52
USP25-207ENST00000464435 CCP110O43303 1012 aa5.58□□□□□ -1.52
USP25-207ENST00000464435 ITGAMP11215 1152 aa5.58□□□□□ -1.52
USP25-207ENST00000464435 XRCC6P12956 609 aaKnown RBP eCLIP5.58□□□□□ -1.52
USP25-207ENST00000464435 TPH1P17752 444 aa5.58□□□□□ -1.52
USP25-207ENST00000464435 GRK6P43250 576 aa5.58□□□□□ -1.52
USP25-207ENST00000464435 NDUFV1P49821 464 aa5.58□□□□□ -1.52
USP25-207ENST00000464435 COPAP53621 1224 aa5.58□□□□□ -1.52
USP25-207ENST00000464435 SCAPQ12770 1279 aa5.58□□□□□ -1.52
USP25-207ENST00000464435 MYO1EQ12965 1108 aa5.58□□□□□ -1.52
USP25-207ENST00000464435 GRM1Q13255 1194 aa5.58□□□□□ -1.52
USP25-207ENST00000464435 RAPGEF1Q13905 1077 aa5.58□□□□□ -1.52
USP25-207ENST00000464435 PDCD2Q16342 344 aaPredicted RBP5.58□□□□□ -1.52
USP25-207ENST00000464435 CYP2A13Q16696 494 aa5.58□□□□□ -1.52
USP25-207ENST00000464435 PFKFB4Q16877 469 aa5.58□□□□□ -1.52
USP25-207ENST00000464435 PTCHD3Q3KNS1 767 aa5.58□□□□□ -1.52
USP25-207ENST00000464435 ZACNQ401N2 412 aa5.58□□□□□ -1.52
USP25-207ENST00000464435 STRIP1Q5VSL9 837 aa5.58□□□□□ -1.52
USP25-207ENST00000464435 LAYNQ6UX15 382 aa5.58□□□□□ -1.52
USP25-207ENST00000464435 LDHAL6AQ6ZMR3 332 aa5.58□□□□□ -1.52
USP25-207ENST00000464435 KRT28Q7Z3Y7 464 aa5.58□□□□□ -1.52
USP25-207ENST00000464435 GPR149Q86SP6 731 aa5.58□□□□□ -1.52
USP25-207ENST00000464435 STYXQ8WUJ0 223 aa5.58□□□□□ -1.52
USP25-207ENST00000464435 CCT6BQ92526 530 aa5.58□□□□□ -1.52
USP25-207ENST00000464435 RNF31Q96EP0 1072 aa5.58□□□□□ -1.52
USP25-207ENST00000464435 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.58□□□□□ -1.52
USP25-207ENST00000464435 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.58□□□□□ -1.52
USP25-207ENST00000464435 DHX36Q9H2U1 1008 aaKnown RBP5.58□□□□□ -1.52
USP25-207ENST00000464435 RIOX1Q9H6W3 641 aa5.58□□□□□ -1.52
USP25-207ENST00000464435 LRFN1Q9P244 771 aa5.58□□□□□ -1.52
USP25-207ENST00000464435 PRAMEF33A0A0G2JMD5 474 aa5.57□□□□□ -1.52
USP25-207ENST00000464435 hCG_1642624A0A1W2PR95 340 aa5.57□□□□□ -1.52
USP25-207ENST00000464435 A0A1W2PS29 197 aa5.57□□□□□ -1.52
USP25-207ENST00000464435 HNRNPDLO14979 420 aaKnown RBP5.57□□□□□ -1.52
USP25-207ENST00000464435 PRAMEF10O60809 474 aa5.57□□□□□ -1.52
USP25-207ENST00000464435 SRGAP2O75044 1071 aa5.57□□□□□ -1.52
USP25-207ENST00000464435 PIAS2O75928 621 aa5.57□□□□□ -1.52
USP25-207ENST00000464435 TNFRSF6BO95407 300 aa5.57□□□□□ -1.52
USP25-207ENST00000464435 NUDT3O95989 172 aa5.57□□□□□ -1.52
USP25-207ENST00000464435 ITGALP20701 1170 aa5.57□□□□□ -1.52
USP25-207ENST00000464435 KCNA3P22001 575 aa5.57□□□□□ -1.52
USP25-207ENST00000464435 FBLP22087 321 aaKnown RBP5.57□□□□□ -1.52
USP25-207ENST00000464435 MPLP40238 635 aa5.57□□□□□ -1.52
USP25-207ENST00000464435 DGKEP52429 567 aa5.57□□□□□ -1.52
USP25-207ENST00000464435 VAV2P52735 878 aa5.57□□□□□ -1.52
USP25-207ENST00000464435 FOXI1Q12951 378 aa5.57□□□□□ -1.52
USP25-207ENST00000464435 INSCQ1MX18 579 aa5.57□□□□□ -1.52
USP25-207ENST00000464435 MGAT5BQ3V5L5 792 aa5.57□□□□□ -1.52
USP25-207ENST00000464435 PREPLQ4J6C6 727 aaPredicted RBP5.57□□□□□ -1.52
USP25-207ENST00000464435 PRR16Q569H4 304 aa5.57□□□□□ -1.52
USP25-207ENST00000464435 ARHGAP40Q5TG30 622 aa5.57□□□□□ -1.52
USP25-207ENST00000464435 VPS53Q5VIR6 699 aa5.57□□□□□ -1.52
USP25-207ENST00000464435 RAP1GAP2Q684P5 730 aa5.57□□□□□ -1.52
USP25-207ENST00000464435 SP5Q6BEB4 398 aaPredicted RBP5.57□□□□□ -1.52
USP25-207ENST00000464435 LIN54Q6MZP7 749 aa5.57□□□□□ -1.52
USP25-207ENST00000464435 KIAA0408Q6ZU52 694 aa5.57□□□□□ -1.52
USP25-207ENST00000464435 CLNKQ7Z7G1 428 aa5.57□□□□□ -1.52
USP25-207ENST00000464435 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.57□□□□□ -1.52
USP25-207ENST00000464435 ZNF384Q8TF68 577 aa5.57□□□□□ -1.52
USP25-207ENST00000464435 EIF2AQ9BY44 585 aaKnown RBP5.57□□□□□ -1.52
USP25-207ENST00000464435 PCDHAC1Q9H158 963 aa5.57□□□□□ -1.52
USP25-207ENST00000464435 MAGEH1Q9H213 219 aa5.57□□□□□ -1.52
USP25-207ENST00000464435 WDR26Q9H7D7 661 aa5.57□□□□□ -1.52
USP25-207ENST00000464435 SYNPO2LQ9H987 977 aa5.57□□□□□ -1.52
USP25-207ENST00000464435 AGO4Q9HCK5 861 aaKnown RBP5.57□□□□□ -1.52
USP25-207ENST00000464435 TM7SF3Q9NS93 570 aa5.57□□□□□ -1.52
USP25-207ENST00000464435 ZSCAN32Q9NX65 697 aa5.57□□□□□ -1.52
USP25-207ENST00000464435 DKK4Q9UBT3 224 aa5.57□□□□□ -1.52
USP25-207ENST00000464435 TESQ9UGI8 421 aaKnown RBP5.57□□□□□ -1.52
USP25-207ENST00000464435 NDRG4Q9ULP0 352 aaKnown RBP5.57□□□□□ -1.52
USP25-207ENST00000464435 CAPN11Q9UMQ6 739 aa5.57□□□□□ -1.52
USP25-207ENST00000464435 E7ENX8 843 aa5.56□□□□□ -1.52
USP25-207ENST00000464435 SYT5O00445 386 aa5.56□□□□□ -1.52
USP25-207ENST00000464435 PIP5K1BO14986 540 aa5.56□□□□□ -1.52
USP25-207ENST00000464435 KCNQ3O43525 872 aa5.56□□□□□ -1.52
USP25-207ENST00000464435 INMTO95050 263 aa5.56□□□□□ -1.52
USP25-207ENST00000464435 RASAL1O95294 804 aa5.56□□□□□ -1.52
USP25-207ENST00000464435 CSF1RP07333 972 aa5.56□□□□□ -1.52
USP25-207ENST00000464435 PECAM1P16284 738 aaPredicted RBP5.56□□□□□ -1.52
USP25-207ENST00000464435 EGR1P18146 543 aa5.56□□□□□ -1.52
USP25-207ENST00000464435 ATICP31939 592 aa5.56□□□□□ -1.52
USP25-207ENST00000464435 NPTX2P47972 431 aa5.56□□□□□ -1.52
USP25-207ENST00000464435 TAP2Q03519 686 aa5.56□□□□□ -1.52
USP25-207ENST00000464435 DYRK1AQ13627 763 aa5.56□□□□□ -1.52
USP25-207ENST00000464435 SPARCL1Q14515 664 aa5.56□□□□□ -1.52
USP25-207ENST00000464435 ZNF750Q32MQ0 723 aa5.56□□□□□ -1.52
USP25-207ENST00000464435 RBM20Q5T481 1227 aaKnown RBP5.56□□□□□ -1.52
USP25-207ENST00000464435 TMTC4Q5T4D3 741 aa5.56□□□□□ -1.52
USP25-207ENST00000464435 RGS7BPQ6MZT1 257 aaPredicted RBP5.56□□□□□ -1.52
USP25-207ENST00000464435 CCDC28AQ8IWP9 274 aa5.56□□□□□ -1.52
USP25-207ENST00000464435 FAM9AQ8IZU1 332 aaPredicted RBP5.56□□□□□ -1.52
USP25-207ENST00000464435 LNX2Q8N448 690 aa5.56□□□□□ -1.52
USP25-207ENST00000464435 CCDC150Q8NCX0 1101 aa5.56□□□□□ -1.52
USP25-207ENST00000464435 DNAJB14Q8TBM8 379 aa5.56□□□□□ -1.52
USP25-207ENST00000464435 TMEM171Q8WVE6 324 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms