RNA–Protein interactions for RNA: ENST00000464313.1

PTPN12-210, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 4

Gene PTPN12, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-210	ENST00000464313	YY2	O15391	372 aa		4.89	□□□□□ -1.63
PTPN12-210	ENST00000464313	PROM1	O43490	865 aa		4.89	□□□□□ -1.63
PTPN12-210	ENST00000464313	VNN1	O95497	513 aa		4.89	□□□□□ -1.63
PTPN12-210	ENST00000464313	LDHA	P00338	332 aa	Known RBP	4.89	□□□□□ -1.63
PTPN12-210	ENST00000464313	TPH1	P17752	444 aa		4.89	□□□□□ -1.63
PTPN12-210	ENST00000464313	IL6ST	P40189	918 aa	Predicted RBP	4.89	□□□□□ -1.63
PTPN12-210	ENST00000464313	HSPA7	P48741	367 aa		4.89	□□□□□ -1.63
PTPN12-210	ENST00000464313	PDE6C	P51160	858 aa		4.89	□□□□□ -1.63
PTPN12-210	ENST00000464313	MAPK10	P53779	464 aa		4.89	□□□□□ -1.63
PTPN12-210	ENST00000464313	ITIH3	Q06033	890 aa		4.89	□□□□□ -1.63
PTPN12-210	ENST00000464313	TXNRD1	Q16881	649 aa		4.89	□□□□□ -1.63
PTPN12-210	ENST00000464313	MPEG1	Q2M385	716 aa		4.89	□□□□□ -1.63
PTPN12-210	ENST00000464313	ZNF750	Q32MQ0	723 aa		4.89	□□□□□ -1.63
PTPN12-210	ENST00000464313	PAPD7	Q5XG87	772 aa	Known RBP	4.89	□□□□□ -1.63
PTPN12-210	ENST00000464313	C1orf228	Q6PIY5	440 aa		4.89	□□□□□ -1.63
PTPN12-210	ENST00000464313	CRTC1	Q6UUV9	634 aa		4.89	□□□□□ -1.63
PTPN12-210	ENST00000464313		Q6ZNX1	250 aa		4.89	□□□□□ -1.63
PTPN12-210	ENST00000464313	VGLL2	Q8N8G2	317 aa		4.89	□□□□□ -1.63
PTPN12-210	ENST00000464313	IPCEF1	Q8WWN9	437 aa	Predicted RBP	4.89	□□□□□ -1.63
PTPN12-210	ENST00000464313	TFAP2B	Q92481	460 aa		4.89	□□□□□ -1.63
PTPN12-210	ENST00000464313	C18orf8	Q96DM3	657 aa		4.89	□□□□□ -1.63
PTPN12-210	ENST00000464313	FBXL20	Q96IG2	436 aa		4.89	□□□□□ -1.63
PTPN12-210	ENST00000464313	ZC3H10	Q96K80	434 aa	Known RBP	4.89	□□□□□ -1.63
PTPN12-210	ENST00000464313	NELL2	Q99435	816 aa		4.89	□□□□□ -1.63
PTPN12-210	ENST00000464313	INO80B	Q9C086	356 aa	Predicted RBP	4.89	□□□□□ -1.63
PTPN12-210	ENST00000464313	PLCB1	Q9NQ66	1216 aa		4.89	□□□□□ -1.63
PTPN12-210	ENST00000464313	SYBU	Q9NX95	663 aa		4.89	□□□□□ -1.63
PTPN12-210	ENST00000464313	COL11A2	P13942	1736 aa	Predicted RBP	4.89	□□□□□ -1.63
PTPN12-210	ENST00000464313	ABHD14A-ACY1	A0A1B0GW23	586 aa		4.88	□□□□□ -1.63
PTPN12-210	ENST00000464313	FAM234B	A2RU67	622 aa		4.88	□□□□□ -1.63
PTPN12-210	ENST00000464313	CLCA1	A8K7I4	914 aa		4.88	□□□□□ -1.63
PTPN12-210	ENST00000464313	ADM5	C9JUS6	153 aa		4.88	□□□□□ -1.63
PTPN12-210	ENST00000464313	RGS10	O43665	173 aa		4.88	□□□□□ -1.63
PTPN12-210	ENST00000464313	PEX1	O43933	1283 aa		4.88	□□□□□ -1.63
PTPN12-210	ENST00000464313	SETSIP	P0DME0	302 aa		4.88	□□□□□ -1.63
PTPN12-210	ENST00000464313	HKR1	P10072	659 aa		4.88	□□□□□ -1.63
PTPN12-210	ENST00000464313	MYL4	P12829	197 aa		4.88	□□□□□ -1.63
PTPN12-210	ENST00000464313	HGF	P14210	728 aa		4.88	□□□□□ -1.63
PTPN12-210	ENST00000464313	EEF1G	P26641	437 aa	Known RBP	4.88	□□□□□ -1.63
PTPN12-210	ENST00000464313	PPM1A	P35813	382 aa		4.88	□□□□□ -1.63
PTPN12-210	ENST00000464313	PLA2G5	P39877	138 aa		4.88	□□□□□ -1.63
PTPN12-210	ENST00000464313	FOXI1	Q12951	378 aa		4.88	□□□□□ -1.63
PTPN12-210	ENST00000464313	CATSPERG	Q6ZRH7	1159 aa		4.88	□□□□□ -1.63
PTPN12-210	ENST00000464313	BEND5	Q7L4P6	421 aa		4.88	□□□□□ -1.63
PTPN12-210	ENST00000464313	SPART	Q8N0X7	666 aa		4.88	□□□□□ -1.63
PTPN12-210	ENST00000464313	FANCB	Q8NB91	859 aa		4.88	□□□□□ -1.63
PTPN12-210	ENST00000464313	OSCP1	Q8WVF1	389 aa		4.88	□□□□□ -1.63
PTPN12-210	ENST00000464313	BRI3BP	Q8WY22	251 aa		4.88	□□□□□ -1.63
PTPN12-210	ENST00000464313	LINC00476	Q8WZB0	136 aa		4.88	□□□□□ -1.63
PTPN12-210	ENST00000464313	GLG1	Q92896	1179 aa		4.88	□□□□□ -1.63
PTPN12-210	ENST00000464313	CAVIN3	Q969G5	261 aa		4.88	□□□□□ -1.63
PTPN12-210	ENST00000464313	ZNF566	Q969W8	418 aa		4.88	□□□□□ -1.63
PTPN12-210	ENST00000464313	FKBP10	Q96AY3	582 aa		4.88	□□□□□ -1.63
PTPN12-210	ENST00000464313	ZBTB45	Q96K62	511 aa	Predicted RBP	4.88	□□□□□ -1.63
PTPN12-210	ENST00000464313	CRB3	Q9BUF7	120 aa		4.88	□□□□□ -1.63
PTPN12-210	ENST00000464313	DHX36	Q9H2U1	1008 aa	Known RBP	4.88	□□□□□ -1.63
PTPN12-210	ENST00000464313	HEYL	Q9NQ87	328 aa	Predicted RBP	4.88	□□□□□ -1.63
PTPN12-210	ENST00000464313	DKK4	Q9UBT3	224 aa		4.88	□□□□□ -1.63
PTPN12-210	ENST00000464313	COX11	Q9Y6N1	276 aa		4.88	□□□□□ -1.63
PTPN12-210	ENST00000464313	SALL3	Q9BXA9	1300 aa		4.88	□□□□□ -1.63
PTPN12-210	ENST00000464313	FER1L4	A9Z1Z3	1794 aa		4.87	□□□□□ -1.63
PTPN12-210	ENST00000464313	AGPS	O00116	658 aa		4.87	□□□□□ -1.63
PTPN12-210	ENST00000464313	CD3EAP	O15446	510 aa	Known RBP	4.87	□□□□□ -1.63
PTPN12-210	ENST00000464313	GABRB3	P28472	473 aa		4.87	□□□□□ -1.63
PTPN12-210	ENST00000464313	NTSR1	P30989	418 aa		4.87	□□□□□ -1.63
PTPN12-210	ENST00000464313	LIPA	P38571	399 aa		4.87	□□□□□ -1.63
PTPN12-210	ENST00000464313	FOLR3	P41439	243 aa		4.87	□□□□□ -1.63
PTPN12-210	ENST00000464313	PTH2R	P49190	550 aa		4.87	□□□□□ -1.63
PTPN12-210	ENST00000464313	SEC24C	P53992	1094 aa		4.87	□□□□□ -1.63
PTPN12-210	ENST00000464313	NXPH1	P58417	271 aa		4.87	□□□□□ -1.63
PTPN12-210	ENST00000464313	KRTAP10-6	P60371	365 aa	Predicted RBP	4.87	□□□□□ -1.63
PTPN12-210	ENST00000464313	MORC3	Q14149	939 aa		4.87	□□□□□ -1.63
PTPN12-210	ENST00000464313	TBCC	Q15814	346 aa		4.87	□□□□□ -1.63
PTPN12-210	ENST00000464313	DGKK	Q5KSL6	1271 aa		4.87	□□□□□ -1.63
PTPN12-210	ENST00000464313	ZNF362	Q5T0B9	420 aa	Predicted RBP	4.87	□□□□□ -1.63
PTPN12-210	ENST00000464313	SLC9A4	Q6AI14	798 aa		4.87	□□□□□ -1.63
PTPN12-210	ENST00000464313	FBXO42	Q6P3S6	717 aa		4.87	□□□□□ -1.63
PTPN12-210	ENST00000464313	USP49	Q70CQ1	688 aa		4.87	□□□□□ -1.63
PTPN12-210	ENST00000464313	ABRA	Q8N0Z2	381 aa		4.87	□□□□□ -1.63
PTPN12-210	ENST00000464313	SDR16C5	Q8N3Y7	309 aa		4.87	□□□□□ -1.63
PTPN12-210	ENST00000464313	GLIS1	Q8NBF1	620 aa		4.87	□□□□□ -1.63
PTPN12-210	ENST00000464313	SMCR8	Q8TEV9	937 aa	Predicted RBP	4.87	□□□□□ -1.63
PTPN12-210	ENST00000464313	POF1B	Q8WVV4	589 aa		4.87	□□□□□ -1.63
PTPN12-210	ENST00000464313	PGBD1	Q96JS3	809 aa		4.87	□□□□□ -1.63
PTPN12-210	ENST00000464313	ARPC5L	Q9BPX5	153 aa		4.87	□□□□□ -1.63
PTPN12-210	ENST00000464313	ARFGAP3	Q9NP61	516 aa		4.87	□□□□□ -1.63
PTPN12-210	ENST00000464313	RGS17	Q9UGC6	210 aa	Predicted RBP	4.87	□□□□□ -1.63
PTPN12-210	ENST00000464313	HPSE	Q9Y251	543 aa		4.87	□□□□□ -1.63
PTPN12-210	ENST00000464313	CEP83	Q9Y592	693 aa		4.87	□□□□□ -1.63
PTPN12-210	ENST00000464313	COMMD10	Q9Y6G5	202 aa		4.87	□□□□□ -1.63
PTPN12-210	ENST00000464313	EPN1	Q9Y6I3	576 aa	Predicted RBP	4.87	□□□□□ -1.63
PTPN12-210	ENST00000464313	MAST3	O60307	1309 aa		4.87	□□□□□ -1.63
PTPN12-210	ENST00000464313	SPATA31A6	Q5VVP1	1343 aa		4.87	□□□□□ -1.63
PTPN12-210	ENST00000464313	WDR27	A2RRH5	827 aa		4.86	□□□□□ -1.63
PTPN12-210	ENST00000464313	AQP7P3	A6NL99	342 aa		4.86	□□□□□ -1.63
PTPN12-210	ENST00000464313	PROB1	E7EW31	1015 aa		4.86	□□□□□ -1.63
PTPN12-210	ENST00000464313		F5H423	210 aa	Predicted RBP	4.86	□□□□□ -1.63
PTPN12-210	ENST00000464313	AREL1	O15033	823 aa		4.86	□□□□□ -1.63
PTPN12-210	ENST00000464313	INMT	O95050	263 aa		4.86	□□□□□ -1.63
PTPN12-210	ENST00000464313	FES	P07332	822 aa		4.86	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms