RNA–Protein interactions for RNA: ENST00000464168.5

USP4-208, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 601 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-208ENST00000464168 SLC6A11P48066 632 aa24.1■■□□□ 1.45
USP4-208ENST00000464168 MESP2Q0VG99 397 aa24.1■■□□□ 1.45
USP4-208ENST00000464168 PSMD6Q15008 389 aa24.1■■□□□ 1.45
USP4-208ENST00000464168 STK38Q15208 465 aa24.1■■□□□ 1.45
USP4-208ENST00000464168 DHCR24Q15392 516 aa24.1■■□□□ 1.45
USP4-208ENST00000464168 CRY1Q16526 586 aa24.1■■□□□ 1.45
USP4-208ENST00000464168 ANO7Q6IWH7 933 aa24.1■■□□□ 1.45
USP4-208ENST00000464168 CNNM4Q6P4Q7 775 aa24.1■■□□□ 1.45
USP4-208ENST00000464168 SFTPA1Q8IWL2 248 aa24.1■■□□□ 1.45
USP4-208ENST00000464168 CCDC127Q96BQ5 260 aa24.1■■□□□ 1.45
USP4-208ENST00000464168 INTS4Q96HW7 963 aaKnown RBP24.1■■□□□ 1.45
USP4-208ENST00000464168 CNOT6LQ96LI5 555 aaKnown RBP24.1■■□□□ 1.45
USP4-208ENST00000464168 CGRRF1Q99675 332 aa24.1■■□□□ 1.45
USP4-208ENST00000464168 DPEP3Q9H4B8 488 aa24.1■■□□□ 1.45
USP4-208ENST00000464168 KIAA1549LQ6ZVL6 1849 aa24.1■■□□□ 1.45
USP4-208ENST00000464168 C4orf47A7E2U8 309 aa24.09■■□□□ 1.45
USP4-208ENST00000464168 SCAMP3O14828 347 aaKnown RBP24.09■■□□□ 1.45
USP4-208ENST00000464168 CHRM1P11229 460 aaPredicted RBP24.09■■□□□ 1.45
USP4-208ENST00000464168 HNRNPLP14866 589 aaKnown RBP eCLIP24.09■■□□□ 1.45
USP4-208ENST00000464168 BCKDHBP21953 392 aa24.09■■□□□ 1.45
USP4-208ENST00000464168 ASIC1P78348 528 aa24.09■■□□□ 1.45
USP4-208ENST00000464168 CYP24A1Q07973 514 aa24.09■■□□□ 1.45
USP4-208ENST00000464168 WDR72Q3MJ13 1102 aa24.09■■□□□ 1.45
USP4-208ENST00000464168 FAM26FQ5R3K3 315 aa24.09■■□□□ 1.45
USP4-208ENST00000464168 TDRD10Q5VZ19 366 aaKnown RBP24.09■■□□□ 1.45
USP4-208ENST00000464168 RHBDF2Q6PJF5 856 aa24.09■■□□□ 1.45
USP4-208ENST00000464168 C11orf74Q86VG3 221 aa24.09■■□□□ 1.45
USP4-208ENST00000464168 ZNF516Q92618 1163 aa24.09■■□□□ 1.45
USP4-208ENST00000464168 FNBP1Q96RU3 617 aa24.09■■□□□ 1.45
USP4-208ENST00000464168 ZNF518BQ9C0D4 1074 aa24.09■■□□□ 1.45
USP4-208ENST00000464168 GZF1Q9H116 711 aaPredicted RBP24.09■■□□□ 1.45
USP4-208ENST00000464168 CUEDC2Q9H467 287 aa24.09■■□□□ 1.45
USP4-208ENST00000464168 CFAP97Q9P2B7 532 aa24.09■■□□□ 1.45
USP4-208ENST00000464168 PTPRDP23468 1912 aa24.08■■□□□ 1.45
USP4-208ENST00000464168 LNP1A1A4G5 178 aa24.08■■□□□ 1.45
USP4-208ENST00000464168 SLC9A3R1O14745 358 aaPredicted RBP24.08■■□□□ 1.45
USP4-208ENST00000464168 CLIC2O15247 247 aa24.08■■□□□ 1.45
USP4-208ENST00000464168 SPTLC2O15270 562 aa24.08■■□□□ 1.45
USP4-208ENST00000464168 CYP2J2P51589 502 aa24.08■■□□□ 1.45
USP4-208ENST00000464168 MRPS21P82921 87 aaKnown RBP24.08■■□□□ 1.45
USP4-208ENST00000464168 AMPD3Q01432 767 aa24.08■■□□□ 1.45
USP4-208ENST00000464168 PSAPL1Q6NUJ1 521 aa24.08■■□□□ 1.45
USP4-208ENST00000464168 TMEM92Q6UXU6 159 aa24.08■■□□□ 1.45
USP4-208ENST00000464168 MDGA1Q8NFP4 955 aa24.08■■□□□ 1.45
USP4-208ENST00000464168 SCFD1Q8WVM8 642 aa24.08■■□□□ 1.45
USP4-208ENST00000464168 DHX58Q96C10 678 aa24.08■■□□□ 1.45
USP4-208ENST00000464168 B3GNT5Q9BYG0 378 aa24.08■■□□□ 1.45
USP4-208ENST00000464168 ELOVL4Q9GZR5 314 aa24.08■■□□□ 1.45
USP4-208ENST00000464168 HELZP42694 1942 aaKnown RBP24.08■■□□□ 1.44
USP4-208ENST00000464168 CLDN5O00501 218 aa24.07■■□□□ 1.44
USP4-208ENST00000464168 STX6O43752 255 aa24.07■■□□□ 1.44
USP4-208ENST00000464168 TNNC1P63316 161 aa24.07■■□□□ 1.44
USP4-208ENST00000464168 NELFCDQ8IXH7 590 aa24.07■■□□□ 1.44
USP4-208ENST00000464168 ALLCQ8N6M5 410 aa24.07■■□□□ 1.44
USP4-208ENST00000464168 XXYLT1Q8NBI6 393 aa24.07■■□□□ 1.44
USP4-208ENST00000464168 OLIG1Q8TAK6 271 aa24.07■■□□□ 1.44
USP4-208ENST00000464168 SLITRK1Q96PX8 696 aa24.07■■□□□ 1.44
USP4-208ENST00000464168 PNKPQ96T60 521 aa24.07■■□□□ 1.44
USP4-208ENST00000464168 C7orf25Q9BPX7 421 aa24.07■■□□□ 1.44
USP4-208ENST00000464168 XYLT2Q9H1B5 865 aa24.07■■□□□ 1.44
USP4-208ENST00000464168 FOXD4L1Q9NU39 408 aa24.07■■□□□ 1.44
USP4-208ENST00000464168 TFIP11Q9UBB9 837 aaKnown RBP24.07■■□□□ 1.44
USP4-208ENST00000464168 A0A0A0MRY4 1105 aa24.06■■□□□ 1.44
USP4-208ENST00000464168 PPP6R2O75170 966 aa24.06■■□□□ 1.44
USP4-208ENST00000464168 KAT7O95251 611 aa24.06■■□□□ 1.44
USP4-208ENST00000464168 STAU1O95793 577 aaKnown RBP24.06■■□□□ 1.44
USP4-208ENST00000464168 MYL6P60660 151 aa24.06■■□□□ 1.44
USP4-208ENST00000464168 SNRPFP62306 86 aaKnown RBP24.06■■□□□ 1.44
USP4-208ENST00000464168 EHHADHQ08426 723 aa24.06■■□□□ 1.44
USP4-208ENST00000464168 EMC10Q5UCC4 262 aa24.06■■□□□ 1.44
USP4-208ENST00000464168 C12orf40Q86WS4 652 aa24.06■■□□□ 1.44
USP4-208ENST00000464168 IQUBQ8NA54 791 aa24.06■■□□□ 1.44
USP4-208ENST00000464168 IL17RCQ8NAC3 791 aa24.06■■□□□ 1.44
USP4-208ENST00000464168 B3GALNT2Q8NCR0 500 aa24.06■■□□□ 1.44
USP4-208ENST00000464168 NXF1Q9UBU9 619 aaKnown RBP24.06■■□□□ 1.44
USP4-208ENST00000464168 GON4LQ3T8J9 2241 aa24.06■■□□□ 1.44
USP4-208ENST00000464168 A8MXQ7 604 aa24.05■■□□□ 1.44
USP4-208ENST00000464168 PATE3B3GLJ2 98 aa24.05■■□□□ 1.44
USP4-208ENST00000464168 SGK1O00141 431 aa24.05■■□□□ 1.44
USP4-208ENST00000464168 GIPC1O14908 333 aa24.05■■□□□ 1.44
USP4-208ENST00000464168 KHNYNO15037 678 aaKnown RBP24.05■■□□□ 1.44
USP4-208ENST00000464168 KLF8O95600 359 aaPredicted RBP24.05■■□□□ 1.44
USP4-208ENST00000464168 MBL2P11226 248 aaPredicted RBP24.05■■□□□ 1.44
USP4-208ENST00000464168 YWHAQP27348 245 aa24.05■■□□□ 1.44
USP4-208ENST00000464168 EIF2DP41214 584 aaKnown RBP24.05■■□□□ 1.44
USP4-208ENST00000464168 IFRD2Q12894 506 aaPredicted RBP24.05■■□□□ 1.44
USP4-208ENST00000464168 SHC4Q6S5L8 630 aa24.05■■□□□ 1.44
USP4-208ENST00000464168 CYP2U1Q7Z449 544 aa24.05■■□□□ 1.44
USP4-208ENST00000464168 TTC30AQ86WT1 665 aa24.05■■□□□ 1.44
USP4-208ENST00000464168 NUP93Q8N1F7 819 aa24.05■■□□□ 1.44
USP4-208ENST00000464168 TXNDC5Q8NBS9 432 aaKnown RBP24.05■■□□□ 1.44
USP4-208ENST00000464168 CDX4O14627 284 aaPredicted RBP24.04■■□□□ 1.44
USP4-208ENST00000464168 ALDH1A2O94788 518 aa24.04■■□□□ 1.44
USP4-208ENST00000464168 ADH1CP00326 375 aa24.04■■□□□ 1.44
USP4-208ENST00000464168 APODP05090 189 aa24.04■■□□□ 1.44
USP4-208ENST00000464168 TIE1P35590 1138 aa24.04■■□□□ 1.44
USP4-208ENST00000464168 KIR2DL1P43626 348 aaPredicted RBP24.04■■□□□ 1.44
USP4-208ENST00000464168 NOVA1P51513 510 aaKnown RBP24.04■■□□□ 1.44
USP4-208ENST00000464168 TRPC3Q13507 836 aa24.04■■□□□ 1.44
USP4-208ENST00000464168 DAB2IPQ5VWQ8 1189 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms