RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 RNF38Q9H0F5 515 aa15.47■□□□□ 0.07
SMC1A-204ENST00000463684 IKZF4Q9H2S9 585 aa15.47■□□□□ 0.07
SMC1A-204ENST00000463684 FSCN3Q9NQT6 498 aa15.47■□□□□ 0.07
SMC1A-204ENST00000463684 SMPD4Q9NXE4 827 aa15.47■□□□□ 0.07
SMC1A-204ENST00000463684 CDH9Q9ULB4 789 aa15.47■□□□□ 0.07
SMC1A-204ENST00000463684 PCDHB9Q9Y5E1 797 aa15.47■□□□□ 0.07
SMC1A-204ENST00000463684 CPQQ9Y646 472 aa15.47■□□□□ 0.07
SMC1A-204ENST00000463684 ANK1P16157 1881 aa15.46■□□□□ 0.07
SMC1A-204ENST00000463684 TBC1D3BA6NDS4 549 aa15.46■□□□□ 0.07
SMC1A-204ENST00000463684 ZNF840PA6NDX5 716 aa15.46■□□□□ 0.07
SMC1A-204ENST00000463684 ARHGAP33O14559 1287 aa15.46■□□□□ 0.07
SMC1A-204ENST00000463684 HCRTO43612 131 aa15.46■□□□□ 0.07
SMC1A-204ENST00000463684 ADAM23O75077 832 aa15.46■□□□□ 0.07
SMC1A-204ENST00000463684 ATP2C2O75185 946 aa15.46■□□□□ 0.07
SMC1A-204ENST00000463684 SYPP08247 313 aa15.46■□□□□ 0.07
SMC1A-204ENST00000463684 ADH5P11766 374 aa15.46■□□□□ 0.07
SMC1A-204ENST00000463684 DDIT3P35638 169 aa15.46■□□□□ 0.07
SMC1A-204ENST00000463684 FAM193AP78312 1265 aa15.46■□□□□ 0.07
SMC1A-204ENST00000463684 CYP27A1Q02318 531 aa15.46■□□□□ 0.07
SMC1A-204ENST00000463684 KDSRQ06136 332 aa15.46■□□□□ 0.07
SMC1A-204ENST00000463684 ZNF33AQ06730 810 aa15.46■□□□□ 0.07
SMC1A-204ENST00000463684 MESP2Q0VG99 397 aa15.46■□□□□ 0.07
SMC1A-204ENST00000463684 MYO1EQ12965 1108 aa15.46■□□□□ 0.07
SMC1A-204ENST00000463684 SOWAHAQ2M3V2 549 aa15.46■□□□□ 0.07
SMC1A-204ENST00000463684 BTBD8Q5XKL5 378 aa15.46■□□□□ 0.07
SMC1A-204ENST00000463684 C19orf48Q6RUI8 117 aa15.46■□□□□ 0.07
SMC1A-204ENST00000463684 RAB44Q7Z6P3 723 aaPredicted RBP15.46■□□□□ 0.07
SMC1A-204ENST00000463684 DDX42Q86XP3 938 aaKnown RBP eCLIP15.46■□□□□ 0.07
SMC1A-204ENST00000463684 BRSK2Q8IWQ3 736 aa15.46■□□□□ 0.07
SMC1A-204ENST00000463684 SAAL1Q96ER3 474 aa15.46■□□□□ 0.07
SMC1A-204ENST00000463684 ACCSQ96QU6 501 aa15.46■□□□□ 0.07
SMC1A-204ENST00000463684 SYT15Q9BQS2 421 aa15.46■□□□□ 0.07
SMC1A-204ENST00000463684 CAPN10Q9HC96 672 aa15.46■□□□□ 0.07
SMC1A-204ENST00000463684 ZDHHC4Q9NPG8 344 aa15.46■□□□□ 0.07
SMC1A-204ENST00000463684 RBAKQ9NYW8 714 aaPredicted RBP15.46■□□□□ 0.07
SMC1A-204ENST00000463684 CFAP97Q9P2B7 532 aa15.46■□□□□ 0.07
SMC1A-204ENST00000463684 TBC1D14Q9P2M4 693 aa15.46■□□□□ 0.07
SMC1A-204ENST00000463684 GPSM3Q9Y4H4 160 aa15.46■□□□□ 0.07
SMC1A-204ENST00000463684 NBEAQ8NFP9 2946 aa15.46■□□□□ 0.06
SMC1A-204ENST00000463684 DSPP15924 2871 aaKnown RBP15.46■□□□□ 0.06
SMC1A-204ENST00000463684 H3BQV1 296 aa15.45■□□□□ 0.06
SMC1A-204ENST00000463684 SCAMP3O14828 347 aaKnown RBP15.45■□□□□ 0.06
SMC1A-204ENST00000463684 TRIM66O15016 1216 aa15.45■□□□□ 0.06
SMC1A-204ENST00000463684 TMEM191BP0C7N4 346 aa15.45■□□□□ 0.06
SMC1A-204ENST00000463684 CD59P13987 128 aa15.45■□□□□ 0.06
SMC1A-204ENST00000463684 LMO2P25791 158 aa15.45■□□□□ 0.06
SMC1A-204ENST00000463684 LONP1P36776 959 aaKnown RBP15.45■□□□□ 0.06
SMC1A-204ENST00000463684 WNT7BP56706 349 aa15.45■□□□□ 0.06
SMC1A-204ENST00000463684 USP46P62068 366 aa15.45■□□□□ 0.06
SMC1A-204ENST00000463684 PSMC1P62191 440 aaKnown RBP15.45■□□□□ 0.06
SMC1A-204ENST00000463684 GAD2Q05329 585 aa15.45■□□□□ 0.06
SMC1A-204ENST00000463684 SCAPQ12770 1279 aa15.45■□□□□ 0.06
SMC1A-204ENST00000463684 SLC14A1Q13336 389 aa15.45■□□□□ 0.06
SMC1A-204ENST00000463684 TRIP6Q15654 476 aaKnown RBP15.45■□□□□ 0.06
SMC1A-204ENST00000463684 TDRD10Q5VZ19 366 aaKnown RBP15.45■□□□□ 0.06
SMC1A-204ENST00000463684 DYMQ7RTS9 669 aa15.45■□□□□ 0.06
SMC1A-204ENST00000463684 C12orf40Q86WS4 652 aa15.45■□□□□ 0.06
SMC1A-204ENST00000463684 SFR1Q86XK3 245 aa15.45■□□□□ 0.06
SMC1A-204ENST00000463684 KCNV2Q8TDN2 545 aa15.45■□□□□ 0.06
SMC1A-204ENST00000463684 NOC3LQ8WTT2 800 aaKnown RBP15.45■□□□□ 0.06
SMC1A-204ENST00000463684 MYLPFQ96A32 169 aa15.45■□□□□ 0.06
SMC1A-204ENST00000463684 TTLL2Q9BWV7 592 aa15.45■□□□□ 0.06
SMC1A-204ENST00000463684 MRPL44Q9H9J2 332 aaKnown RBP15.45■□□□□ 0.06
SMC1A-204ENST00000463684 OBSL1O75147 1896 aa15.45■□□□□ 0.06
SMC1A-204ENST00000463684 PKD1L2Q7Z442 2459 aa15.44■□□□□ 0.06
SMC1A-204ENST00000463684 CAPNS1P04632 268 aa15.44■□□□□ 0.06
SMC1A-204ENST00000463684 PDGFRBP09619 1106 aa15.44■□□□□ 0.06
SMC1A-204ENST00000463684 MBL2P11226 248 aaPredicted RBP15.44■□□□□ 0.06
SMC1A-204ENST00000463684 NOP14P78316 857 aaKnown RBP15.44■□□□□ 0.06
SMC1A-204ENST00000463684 SCARA3Q6AZY7 606 aa15.44■□□□□ 0.06
SMC1A-204ENST00000463684 SYCP3Q8IZU3 236 aa15.44■□□□□ 0.06
SMC1A-204ENST00000463684 ZNF513Q8N8E2 541 aaPredicted RBP15.44■□□□□ 0.06
SMC1A-204ENST00000463684 CXorf38Q8TB03 319 aa15.44■□□□□ 0.06
SMC1A-204ENST00000463684 HPDLQ96IR7 371 aa15.44■□□□□ 0.06
SMC1A-204ENST00000463684 ANKRD36BP1Q96IX9 119 aa15.44■□□□□ 0.06
SMC1A-204ENST00000463684 SLITRK1Q96PX8 696 aa15.44■□□□□ 0.06
SMC1A-204ENST00000463684 CCDC86Q9H6F5 360 aaKnown RBP15.44■□□□□ 0.06
SMC1A-204ENST00000463684 DNAAF2Q9NVR5 837 aaKnown RBP15.44■□□□□ 0.06
SMC1A-204ENST00000463684 SEL1LQ9UBV2 794 aa15.44■□□□□ 0.06
SMC1A-204ENST00000463684 KIAA1549LQ6ZVL6 1849 aa15.44■□□□□ 0.06
SMC1A-204ENST00000463684 TCHHQ07283 1943 aa15.44■□□□□ 0.06
SMC1A-204ENST00000463684 ANKRD11Q6UB99 2663 aaPredicted RBP15.44■□□□□ 0.06
SMC1A-204ENST00000463684 A0A1W2PQD8 194 aa15.43■□□□□ 0.06
SMC1A-204ENST00000463684 E2F8A0AVK6 867 aa15.43■□□□□ 0.06
SMC1A-204ENST00000463684 SH3BP5O60239 455 aa15.43■□□□□ 0.06
SMC1A-204ENST00000463684 ZNF217O75362 1048 aa15.43■□□□□ 0.06
SMC1A-204ENST00000463684 OLFM2O95897 454 aa15.43■□□□□ 0.06
SMC1A-204ENST00000463684 CHRM1P11229 460 aaPredicted RBP15.43■□□□□ 0.06
SMC1A-204ENST00000463684 GABRG2P18507 467 aa15.43■□□□□ 0.06
SMC1A-204ENST00000463684 GARTP22102 1010 aa15.43■□□□□ 0.06
SMC1A-204ENST00000463684 KCNA1Q09470 495 aa15.43■□□□□ 0.06
SMC1A-204ENST00000463684 TAF10Q12962 218 aa15.43■□□□□ 0.06
SMC1A-204ENST00000463684 LY6G5CQ5SRR4 150 aa15.43■□□□□ 0.06
SMC1A-204ENST00000463684 L1TD1Q5T7N2 865 aaKnown RBP15.43■□□□□ 0.06
SMC1A-204ENST00000463684 SDE2Q6IQ49 451 aa15.43■□□□□ 0.06
SMC1A-204ENST00000463684 HS2ST1Q7LGA3 356 aa15.43■□□□□ 0.06
SMC1A-204ENST00000463684 PDZD3Q86UT5 571 aa15.43■□□□□ 0.06
SMC1A-204ENST00000463684 NAT16Q8N8M0 369 aa15.43■□□□□ 0.06
SMC1A-204ENST00000463684 ZSWIM2Q8NEG5 633 aa15.43■□□□□ 0.06
SMC1A-204ENST00000463684 OR2I1PQ8NGU4 316 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms