RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 SLITRK1Q96PX8 696 aa21.84■■□□□ 1.09
PDLIM4-205ENST00000463615 HINFPQ9BQA5 517 aa21.84■■□□□ 1.09
PDLIM4-205ENST00000463615 C2orf42Q9NWW7 574 aa21.84■■□□□ 1.09
PDLIM4-205ENST00000463615 COMMD8Q9NX08 183 aa21.84■■□□□ 1.09
PDLIM4-205ENST00000463615 NCDNQ9UBB6 729 aa21.84■■□□□ 1.09
PDLIM4-205ENST00000463615 HELZP42694 1942 aaKnown RBP21.84■■□□□ 1.09
PDLIM4-205ENST00000463615 CCDC163A0A0D9SF12 145 aa21.83■■□□□ 1.09
PDLIM4-205ENST00000463615 FAM92AA1XBS5 289 aa21.83■■□□□ 1.09
PDLIM4-205ENST00000463615 CLDN5O00501 218 aa21.83■■□□□ 1.09
PDLIM4-205ENST00000463615 TNFRSF10BO14763 440 aa21.83■■□□□ 1.09
PDLIM4-205ENST00000463615 AKAP3O75969 853 aa21.83■■□□□ 1.09
PDLIM4-205ENST00000463615 NR2F2P24468 414 aa21.83■■□□□ 1.09
PDLIM4-205ENST00000463615 GALK1P51570 392 aa21.83■■□□□ 1.09
PDLIM4-205ENST00000463615 CEP135Q66GS9 1140 aa21.83■■□□□ 1.09
PDLIM4-205ENST00000463615 FAM35AQ86V20 835 aa21.83■■□□□ 1.09
PDLIM4-205ENST00000463615 KIAA2013Q8IYS2 634 aa21.83■■□□□ 1.09
PDLIM4-205ENST00000463615 P2RY13Q9BPV8 354 aa21.83■■□□□ 1.09
PDLIM4-205ENST00000463615 WNT6Q9Y6F9 365 aa21.83■■□□□ 1.09
PDLIM4-205ENST00000463615 DCHS1Q96JQ0 3298 aa21.82■■□□□ 1.08
PDLIM4-205ENST00000463615 FRYLO94915 3013 aa21.82■■□□□ 1.08
PDLIM4-205ENST00000463615 LEFTY2O00292 366 aa21.82■■□□□ 1.08
PDLIM4-205ENST00000463615 TGM1P22735 817 aa21.82■■□□□ 1.08
PDLIM4-205ENST00000463615 RPL13P26373 211 aaKnown RBP21.82■■□□□ 1.08
PDLIM4-205ENST00000463615 YWHAQP27348 245 aa21.82■■□□□ 1.08
PDLIM4-205ENST00000463615 ASPAP45381 313 aa21.82■■□□□ 1.08
PDLIM4-205ENST00000463615 RAP1GAPP47736 663 aa21.82■■□□□ 1.08
PDLIM4-205ENST00000463615 VAMP7P51809 220 aa21.82■■□□□ 1.08
PDLIM4-205ENST00000463615 DMWDQ09019 674 aa21.82■■□□□ 1.08
PDLIM4-205ENST00000463615 NR1H3Q13133 447 aa21.82■■□□□ 1.08
PDLIM4-205ENST00000463615 LAIR1Q6GTX8 287 aa21.82■■□□□ 1.08
PDLIM4-205ENST00000463615 WDR5BQ86VZ2 330 aa21.82■■□□□ 1.08
PDLIM4-205ENST00000463615 FUKQ8N0W3 1084 aa21.82■■□□□ 1.08
PDLIM4-205ENST00000463615 SMARCD1Q96GM5 515 aa21.82■■□□□ 1.08
PDLIM4-205ENST00000463615 CCDC34Q96HJ3 373 aa21.82■■□□□ 1.08
PDLIM4-205ENST00000463615 RNF38Q9H0F5 515 aa21.82■■□□□ 1.08
PDLIM4-205ENST00000463615 FBRSL1Q9HCM7 1045 aaKnown RBP21.82■■□□□ 1.08
PDLIM4-205ENST00000463615 CSNK1G1Q9HCP0 422 aa21.82■■□□□ 1.08
PDLIM4-205ENST00000463615 DMAP1Q9NPF5 467 aaPredicted RBP21.82■■□□□ 1.08
PDLIM4-205ENST00000463615 HRO43593 1189 aa21.81■■□□□ 1.08
PDLIM4-205ENST00000463615 NFATC1O95644 943 aa21.81■■□□□ 1.08
PDLIM4-205ENST00000463615 HLA-DRAP01903 254 aa21.81■■□□□ 1.08
PDLIM4-205ENST00000463615 ZDHHC11BP0C7U3 371 aa21.81■■□□□ 1.08
PDLIM4-205ENST00000463615 PSMC2P35998 433 aaKnown RBP21.81■■□□□ 1.08
PDLIM4-205ENST00000463615 FNTBP49356 437 aa21.81■■□□□ 1.08
PDLIM4-205ENST00000463615 INCA1Q0VD86 236 aa21.81■■□□□ 1.08
PDLIM4-205ENST00000463615 EDRF1Q3B7T1 1238 aa21.81■■□□□ 1.08
PDLIM4-205ENST00000463615 CD101Q93033 1021 aa21.81■■□□□ 1.08
PDLIM4-205ENST00000463615 KCNK16Q96T55 309 aa21.81■■□□□ 1.08
PDLIM4-205ENST00000463615 DUSP9Q99956 384 aaKnown RBP21.81■■□□□ 1.08
PDLIM4-205ENST00000463615 LINC00597Q9H2U6 94 aa21.81■■□□□ 1.08
PDLIM4-205ENST00000463615 LRP3O75074 770 aa21.8■■□□□ 1.08
PDLIM4-205ENST00000463615 EGFP01133 1207 aa21.8■■□□□ 1.08
PDLIM4-205ENST00000463615 GTF2H1P32780 548 aa21.8■■□□□ 1.08
PDLIM4-205ENST00000463615 TUBP50607 506 aa21.8■■□□□ 1.08
PDLIM4-205ENST00000463615 NDST1P52848 882 aa21.8■■□□□ 1.08
PDLIM4-205ENST00000463615 ADAM9Q13443 819 aa21.8■■□□□ 1.08
PDLIM4-205ENST00000463615 COBLL1Q53SF7 1204 aa21.8■■□□□ 1.08
PDLIM4-205ENST00000463615 PKN3Q6P5Z2 889 aa21.8■■□□□ 1.08
PDLIM4-205ENST00000463615 SCARA5Q6ZMJ2 495 aa21.8■■□□□ 1.08
PDLIM4-205ENST00000463615 DDX42Q86XP3 938 aaKnown RBP eCLIP21.8■■□□□ 1.08
PDLIM4-205ENST00000463615 RMDN1Q96DB5 314 aa21.8■■□□□ 1.08
PDLIM4-205ENST00000463615 FAXDC2Q96IV6 333 aa21.8■■□□□ 1.08
PDLIM4-205ENST00000463615 CYP3A43Q9HB55 503 aa21.8■■□□□ 1.08
PDLIM4-205ENST00000463615 DLL3Q9NYJ7 618 aa21.8■■□□□ 1.08
PDLIM4-205ENST00000463615 GMEB2Q9UKD1 530 aa21.8■■□□□ 1.08
PDLIM4-205ENST00000463615 RAB23Q9ULC3 237 aa21.8■■□□□ 1.08
PDLIM4-205ENST00000463615 SLC9A3R1O14745 358 aaPredicted RBP21.79■■□□□ 1.08
PDLIM4-205ENST00000463615 RNF40O75150 1001 aa21.79■■□□□ 1.08
PDLIM4-205ENST00000463615 RETP07949 1114 aa21.79■■□□□ 1.08
PDLIM4-205ENST00000463615 PIK3CAP42336 1068 aa21.79■■□□□ 1.08
PDLIM4-205ENST00000463615 SLC5A3P53794 718 aa21.79■■□□□ 1.08
PDLIM4-205ENST00000463615 PPP3CAQ08209 521 aa21.79■■□□□ 1.08
PDLIM4-205ENST00000463615 ACOT1Q86TX2 421 aa21.79■■□□□ 1.08
PDLIM4-205ENST00000463615 FAM186BQ8IYM0 893 aa21.79■■□□□ 1.08
PDLIM4-205ENST00000463615 ADGRG2Q8IZP9 1017 aa21.79■■□□□ 1.08
PDLIM4-205ENST00000463615 FMR1NBQ8N0W7 255 aaPredicted RBP21.79■■□□□ 1.08
PDLIM4-205ENST00000463615 CAMKK1Q8N5S9 505 aa21.79■■□□□ 1.08
PDLIM4-205ENST00000463615 ZMIZ2Q8NF64 920 aa21.79■■□□□ 1.08
PDLIM4-205ENST00000463615 CCDC26Q8TAB7 109 aa21.79■■□□□ 1.08
PDLIM4-205ENST00000463615 EZH1Q92800 747 aaPredicted RBP21.79■■□□□ 1.08
PDLIM4-205ENST00000463615 ELMO3Q96BJ8 720 aa21.79■■□□□ 1.08
PDLIM4-205ENST00000463615 GDPD2Q9HCC8 539 aa21.79■■□□□ 1.08
PDLIM4-205ENST00000463615 MAPK8IP1Q9UQF2 711 aa21.79■■□□□ 1.08
PDLIM4-205ENST00000463615 CPQQ9Y646 472 aa21.79■■□□□ 1.08
PDLIM4-205ENST00000463615 AP1G2O75843 785 aa21.78■■□□□ 1.08
PDLIM4-205ENST00000463615 KRT13P13646 458 aa21.78■■□□□ 1.08
PDLIM4-205ENST00000463615 SIM2Q14190 667 aaPredicted RBP21.78■■□□□ 1.08
PDLIM4-205ENST00000463615 PUM1Q14671 1186 aaKnown RBP eCLIP21.78■■□□□ 1.08
PDLIM4-205ENST00000463615 GAB4Q2WGN9 574 aa21.78■■□□□ 1.08
PDLIM4-205ENST00000463615 NAIF1Q69YI7 327 aaPredicted RBP21.78■■□□□ 1.08
PDLIM4-205ENST00000463615 SPOPLQ6IQ16 392 aa21.78■■□□□ 1.08
PDLIM4-205ENST00000463615 SCAMP5Q8TAC9 235 aa21.78■■□□□ 1.08
PDLIM4-205ENST00000463615 TAS1R2Q8TE23 839 aa21.78■■□□□ 1.08
PDLIM4-205ENST00000463615 FBXO32Q969P5 355 aa21.78■■□□□ 1.08
PDLIM4-205ENST00000463615 SMOQ99835 787 aa21.78■■□□□ 1.08
PDLIM4-205ENST00000463615 MED10Q9BTT4 135 aa21.78■■□□□ 1.08
PDLIM4-205ENST00000463615 IMPG2Q9BZV3 1241 aa21.78■■□□□ 1.08
PDLIM4-205ENST00000463615 APOBEC3GQ9HC16 384 aaKnown RBP21.78■■□□□ 1.08
PDLIM4-205ENST00000463615 TMEM8AQ9HCN3 771 aa21.78■■□□□ 1.08
PDLIM4-205ENST00000463615 KRT82Q9NSB4 513 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms