RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 SLC22A12Q96S37 553 aa17.21■□□□□ 0.35
COL1A1-202ENST00000463440 HNRNPABQ99729 332 aaKnown RBP17.21■□□□□ 0.35
COL1A1-202ENST00000463440 FAM124BQ9H5Z6 455 aaPredicted RBP17.21■□□□□ 0.35
COL1A1-202ENST00000463440 FAM86C1Q9NVL1 165 aa17.21■□□□□ 0.35
COL1A1-202ENST00000463440 COMMD8Q9NX08 183 aa17.21■□□□□ 0.35
COL1A1-202ENST00000463440 GTSE1Q9NYZ3 720 aa17.21■□□□□ 0.35
COL1A1-202ENST00000463440 F5P12259 2224 aa17.21■□□□□ 0.35
COL1A1-202ENST00000463440 ANAPC1Q9H1A4 1944 aa17.21■□□□□ 0.35
COL1A1-202ENST00000463440 SHISA7A6NL88 538 aa17.2■□□□□ 0.34
COL1A1-202ENST00000463440 FGFR1OPO95684 399 aaKnown RBP17.2■□□□□ 0.34
COL1A1-202ENST00000463440 GNA14O95837 355 aa17.2■□□□□ 0.34
COL1A1-202ENST00000463440 RPS9P46781 194 aaKnown RBP17.2■□□□□ 0.34
COL1A1-202ENST00000463440 SLC5A3P53794 718 aa17.2■□□□□ 0.34
COL1A1-202ENST00000463440 STX17P56962 302 aa17.2■□□□□ 0.34
COL1A1-202ENST00000463440 MAP3K7CLP57077 242 aa17.2■□□□□ 0.34
COL1A1-202ENST00000463440 MTF1Q14872 753 aa17.2■□□□□ 0.34
COL1A1-202ENST00000463440 C1orf210Q8IVY1 113 aa17.2■□□□□ 0.34
COL1A1-202ENST00000463440 TTC8Q8TAM2 541 aa17.2■□□□□ 0.34
COL1A1-202ENST00000463440 WHAMMQ8TF30 809 aa17.2■□□□□ 0.34
COL1A1-202ENST00000463440 TATDN2Q93075 761 aa17.2■□□□□ 0.34
COL1A1-202ENST00000463440 SMOQ99835 787 aa17.2■□□□□ 0.34
COL1A1-202ENST00000463440 FAM83CQ9BQN1 747 aa17.2■□□□□ 0.34
COL1A1-202ENST00000463440 CSNK1G1Q9HCP0 422 aa17.2■□□□□ 0.34
COL1A1-202ENST00000463440 CISHQ9NSE2 258 aa17.2■□□□□ 0.34
COL1A1-202ENST00000463440 SPATA6Q9NWH7 488 aaPredicted RBP17.2■□□□□ 0.34
COL1A1-202ENST00000463440 ARHGAP26Q9UNA1 814 aa17.2■□□□□ 0.34
COL1A1-202ENST00000463440 SPECC1L-ADORA2AF8WAN1 911 aa17.19■□□□□ 0.34
COL1A1-202ENST00000463440 TNFRSF10BO14763 440 aa17.19■□□□□ 0.34
COL1A1-202ENST00000463440 TCF3P15923 654 aa17.19■□□□□ 0.34
COL1A1-202ENST00000463440 CTHP32929 405 aa17.19■□□□□ 0.34
COL1A1-202ENST00000463440 SOX9P48436 509 aa17.19■□□□□ 0.34
COL1A1-202ENST00000463440 FMO5P49326 533 aa17.19■□□□□ 0.34
COL1A1-202ENST00000463440 YWHAEP62258 255 aaKnown RBP17.19■□□□□ 0.34
COL1A1-202ENST00000463440 TNK2Q07912 1038 aa17.19■□□□□ 0.34
COL1A1-202ENST00000463440 CETN1Q12798 172 aa17.19■□□□□ 0.34
COL1A1-202ENST00000463440 USP4Q13107 963 aa17.19■□□□□ 0.34
COL1A1-202ENST00000463440 PDGFRLQ15198 375 aa17.19■□□□□ 0.34
COL1A1-202ENST00000463440 ZNF77Q15935 545 aa17.19■□□□□ 0.34
COL1A1-202ENST00000463440 ZNF394Q53GI3 561 aa17.19■□□□□ 0.34
COL1A1-202ENST00000463440 CLEC17AQ6ZS10 378 aa17.19■□□□□ 0.34
COL1A1-202ENST00000463440 TTC16Q8NEE8 873 aa17.19■□□□□ 0.34
COL1A1-202ENST00000463440 ZMIZ2Q8NF64 920 aa17.19■□□□□ 0.34
COL1A1-202ENST00000463440 SCAMP5Q8TAC9 235 aa17.19■□□□□ 0.34
COL1A1-202ENST00000463440 SH3RF2Q8TEC5 729 aa17.19■□□□□ 0.34
COL1A1-202ENST00000463440 HEXIM2Q96MH2 286 aaKnown RBP17.19■□□□□ 0.34
COL1A1-202ENST00000463440 SRRTQ9BXP5 876 aaKnown RBP17.19■□□□□ 0.34
COL1A1-202ENST00000463440 FBXO44Q9H4M3 255 aa17.19■□□□□ 0.34
COL1A1-202ENST00000463440 IL37Q9NZH6 218 aa17.19■□□□□ 0.34
COL1A1-202ENST00000463440 MYH10P35580 1976 aa17.19■□□□□ 0.34
COL1A1-202ENST00000463440 PMM2O15305 246 aa17.18■□□□□ 0.34
COL1A1-202ENST00000463440 BEST1O76090 585 aa17.18■□□□□ 0.34
COL1A1-202ENST00000463440 HOXD11P31277 338 aaPredicted RBP17.18■□□□□ 0.34
COL1A1-202ENST00000463440 SLC7A9P82251 487 aa17.18■□□□□ 0.34
COL1A1-202ENST00000463440 FZD5Q13467 585 aa17.18■□□□□ 0.34
COL1A1-202ENST00000463440 CUL2Q13617 745 aa17.18■□□□□ 0.34
COL1A1-202ENST00000463440 RUNX3Q13761 415 aa17.18■□□□□ 0.34
COL1A1-202ENST00000463440 RIN3Q8TB24 985 aa17.18■□□□□ 0.34
COL1A1-202ENST00000463440 TMEM176AQ96HP8 235 aa17.18■□□□□ 0.34
COL1A1-202ENST00000463440 PHOX2BQ99453 314 aa17.18■□□□□ 0.34
COL1A1-202ENST00000463440 ARID3AQ99856 593 aa17.18■□□□□ 0.34
COL1A1-202ENST00000463440 CLSTN2Q9H4D0 955 aa17.18■□□□□ 0.34
COL1A1-202ENST00000463440 EBF3Q9H4W6 596 aa17.18■□□□□ 0.34
COL1A1-202ENST00000463440 DUS2Q9NX74 493 aaKnown RBP17.18■□□□□ 0.34
COL1A1-202ENST00000463440 KIF26AQ9ULI4 1882 aaPredicted RBP17.18■□□□□ 0.34
COL1A1-202ENST00000463440 P4HA2O15460 535 aa17.17■□□□□ 0.34
COL1A1-202ENST00000463440 LAMTOR5O43504 91 aa17.17■□□□□ 0.34
COL1A1-202ENST00000463440 OLFM2O95897 454 aa17.17■□□□□ 0.34
COL1A1-202ENST00000463440 OAS1P00973 400 aaKnown RBP17.17■□□□□ 0.34
COL1A1-202ENST00000463440 CCDC192P0DO97 292 aa17.17■□□□□ 0.34
COL1A1-202ENST00000463440 TBXAS1P24557 533 aaPredicted RBP17.17■□□□□ 0.34
COL1A1-202ENST00000463440 IFNAR2P48551 515 aa17.17■□□□□ 0.34
COL1A1-202ENST00000463440 MRE11P49959 708 aa17.17■□□□□ 0.34
COL1A1-202ENST00000463440 AMPD2Q01433 879 aa17.17■□□□□ 0.34
COL1A1-202ENST00000463440 LRRC32Q14392 662 aa17.17■□□□□ 0.34
COL1A1-202ENST00000463440 PPP1R26Q5T8A7 1209 aaPredicted RBP17.17■□□□□ 0.34
COL1A1-202ENST00000463440 TRIM68Q6AZZ1 485 aa17.17■□□□□ 0.34
COL1A1-202ENST00000463440 CLEC20AQ6ZU45 233 aa17.17■□□□□ 0.34
COL1A1-202ENST00000463440 ALYREFQ86V81 257 aaKnown RBP17.17■□□□□ 0.34
COL1A1-202ENST00000463440 ZNF687Q8N1G0 1237 aa17.17■□□□□ 0.34
COL1A1-202ENST00000463440 MLKLQ8NB16 471 aa17.17■□□□□ 0.34
COL1A1-202ENST00000463440 OSCP1Q8WVF1 389 aa17.17■□□□□ 0.34
COL1A1-202ENST00000463440 ATP2A3Q93084 1043 aa17.17■□□□□ 0.34
COL1A1-202ENST00000463440 IER2Q9BTL4 223 aa17.17■□□□□ 0.34
COL1A1-202ENST00000463440 LMAN1LQ9HAT1 526 aa17.17■□□□□ 0.34
COL1A1-202ENST00000463440 PNPLA8Q9NP80 782 aa17.17■□□□□ 0.34
COL1A1-202ENST00000463440 HPS4Q9NQG7 708 aa17.17■□□□□ 0.34
COL1A1-202ENST00000463440 CHORDC1Q9UHD1 332 aaPredicted RBP17.17■□□□□ 0.34
COL1A1-202ENST00000463440 RWDD2AQ9UIY3 292 aa17.17■□□□□ 0.34
COL1A1-202ENST00000463440 FAM92AA1XBS5 289 aa17.16■□□□□ 0.34
COL1A1-202ENST00000463440 LEFTY2O00292 366 aa17.16■□□□□ 0.34
COL1A1-202ENST00000463440 MBL2P11226 248 aaPredicted RBP17.16■□□□□ 0.34
COL1A1-202ENST00000463440 ARSAP15289 507 aa17.16■□□□□ 0.34
COL1A1-202ENST00000463440 NBL1P41271 181 aa17.16■□□□□ 0.34
COL1A1-202ENST00000463440 RAD23BP54727 409 aa17.16■□□□□ 0.34
COL1A1-202ENST00000463440 MARSP56192 900 aaKnown RBP17.16■□□□□ 0.34
COL1A1-202ENST00000463440 LRMPQ12912 555 aa17.16■□□□□ 0.34
COL1A1-202ENST00000463440 HECTD3Q5T447 861 aa17.16■□□□□ 0.34
COL1A1-202ENST00000463440 SNX30Q5VWJ9 437 aa17.16■□□□□ 0.34
COL1A1-202ENST00000463440 DDX42Q86XP3 938 aaKnown RBP eCLIP17.16■□□□□ 0.34
COL1A1-202ENST00000463440 TRIM59Q8IWR1 403 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms