RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 PDCD2Q16342 344 aaPredicted RBP13.3□□□□□ -0.28
NUP58-206ENST00000463407 TTC39BQ5VTQ0 682 aaPredicted RBP13.3□□□□□ -0.28
NUP58-206ENST00000463407 PPIL6Q8IXY8 311 aa13.3□□□□□ -0.28
NUP58-206ENST00000463407 ZNF518BQ9C0D4 1074 aa13.3□□□□□ -0.28
NUP58-206ENST00000463407 GTF3C4Q9UKN8 822 aa13.3□□□□□ -0.28
NUP58-206ENST00000463407 HPSEQ9Y251 543 aa13.3□□□□□ -0.28
NUP58-206ENST00000463407 CDY2AQ9Y6F7 541 aa13.3□□□□□ -0.28
NUP58-206ENST00000463407 ARIH2O95376 493 aa13.3□□□□□ -0.28
NUP58-206ENST00000463407 GCKP35557 465 aa13.3□□□□□ -0.28
NUP58-206ENST00000463407 MAGEA4P43358 317 aa13.3□□□□□ -0.28
NUP58-206ENST00000463407 NDST1P52848 882 aa13.3□□□□□ -0.28
NUP58-206ENST00000463407 CUL3Q13618 768 aa13.3□□□□□ -0.28
NUP58-206ENST00000463407 MTFR1Q15390 333 aa13.3□□□□□ -0.28
NUP58-206ENST00000463407 FAXCQ5TGI0 409 aa13.3□□□□□ -0.28
NUP58-206ENST00000463407 FAM131BQ86XD5 332 aa13.3□□□□□ -0.28
NUP58-206ENST00000463407 XPO6Q96QU8 1125 aaKnown RBP13.3□□□□□ -0.28
NUP58-206ENST00000463407 FAM129AQ9BZQ8 928 aa13.3□□□□□ -0.28
NUP58-206ENST00000463407 RUBCNLQ9H714 662 aa13.3□□□□□ -0.28
NUP58-206ENST00000463407 SMPD4Q9NXE4 827 aa13.3□□□□□ -0.28
NUP58-206ENST00000463407 TRMT6Q9UJA5 497 aaKnown RBP13.3□□□□□ -0.28
NUP58-206ENST00000463407 USP20Q9Y2K6 914 aa13.3□□□□□ -0.28
NUP58-206ENST00000463407 TCP11X1B4DZS4 312 aa13.29□□□□□ -0.28
NUP58-206ENST00000463407 H0Y3Z8 333 aa13.29□□□□□ -0.28
NUP58-206ENST00000463407 PRKAR2AP13861 404 aaKnown RBP13.29□□□□□ -0.28
NUP58-206ENST00000463407 UBA1P22314 1058 aaKnown RBP13.29□□□□□ -0.28
NUP58-206ENST00000463407 GUCY1A3Q02108 690 aa13.29□□□□□ -0.28
NUP58-206ENST00000463407 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.29□□□□□ -0.28
NUP58-206ENST00000463407 SMARCD1Q96GM5 515 aa13.29□□□□□ -0.28
NUP58-206ENST00000463407 GIMAP4Q9NUV9 329 aa13.29□□□□□ -0.28
NUP58-206ENST00000463407 CYP39A1Q9NYL5 469 aa13.29□□□□□ -0.28
NUP58-206ENST00000463407 UXTQ9UBK9 157 aaPredicted RBP13.29□□□□□ -0.28
NUP58-206ENST00000463407 SCOCQ9UIL1 159 aa13.29□□□□□ -0.28
NUP58-206ENST00000463407 GAKO14976 1311 aa13.29□□□□□ -0.28
NUP58-206ENST00000463407 NRCAMQ92823 1304 aa13.29□□□□□ -0.28
NUP58-206ENST00000463407 SALL3Q9BXA9 1300 aa13.29□□□□□ -0.28
NUP58-206ENST00000463407 ANGPT2O15123 496 aa13.29□□□□□ -0.28
NUP58-206ENST00000463407 ZSCAN9O15535 394 aaPredicted RBP13.29□□□□□ -0.28
NUP58-206ENST00000463407 PALB2Q86YC2 1186 aa13.29□□□□□ -0.28
NUP58-206ENST00000463407 GRAMD1AQ96CP6 724 aa13.29□□□□□ -0.28
NUP58-206ENST00000463407 ZCWPW1Q9H0M4 648 aa13.29□□□□□ -0.28
NUP58-206ENST00000463407 VPS9D1Q9Y2B5 631 aa13.29□□□□□ -0.28
NUP58-206ENST00000463407 KCNJ1P48048 391 aa13.29□□□□□ -0.28
NUP58-206ENST00000463407 SLC47A2Q86VL8 602 aa13.29□□□□□ -0.28
NUP58-206ENST00000463407 C4orf33Q8N1A6 199 aa13.29□□□□□ -0.28
NUP58-206ENST00000463407 FAM161BQ96MY7 647 aa13.29□□□□□ -0.28
NUP58-206ENST00000463407 HTATIP2Q9BUP3 242 aa13.29□□□□□ -0.28
NUP58-206ENST00000463407 MRPL17Q9NRX2 175 aaKnown RBP13.29□□□□□ -0.28
NUP58-206ENST00000463407 STX18Q9P2W9 335 aaKnown RBP13.29□□□□□ -0.28
NUP58-206ENST00000463407 AP4E1Q9UPM8 1137 aa13.29□□□□□ -0.28
NUP58-206ENST00000463407 NFASCO94856 1347 aa13.29□□□□□ -0.28
NUP58-206ENST00000463407 ACKR2O00590 384 aa13.29□□□□□ -0.28
NUP58-206ENST00000463407 SETSIPP0DME0 302 aa13.29□□□□□ -0.28
NUP58-206ENST00000463407 EPB42P16452 691 aa13.29□□□□□ -0.28
NUP58-206ENST00000463407 YWHAQP27348 245 aa13.29□□□□□ -0.28
NUP58-206ENST00000463407 TBX4P57082 545 aa13.29□□□□□ -0.28
NUP58-206ENST00000463407 DGKZQ13574 1117 aa13.29□□□□□ -0.28
NUP58-206ENST00000463407 TTLL9Q3SXZ7 439 aa13.29□□□□□ -0.28
NUP58-206ENST00000463407 TEDDM1Q5T9Z0 273 aa13.29□□□□□ -0.28
NUP58-206ENST00000463407 ZSWIM1Q9BR11 485 aa13.29□□□□□ -0.28
NUP58-206ENST00000463407 NDE1Q9NXR1 346 aa13.29□□□□□ -0.28
NUP58-206ENST00000463407 ABCE1P61221 599 aaKnown RBP13.29□□□□□ -0.28
NUP58-206ENST00000463407 CXorf38Q8TB03 319 aa13.29□□□□□ -0.28
NUP58-206ENST00000463407 OTULINQ96BN8 352 aa13.29□□□□□ -0.28
NUP58-206ENST00000463407 DNAJC7Q99615 494 aa13.29□□□□□ -0.28
NUP58-206ENST00000463407 WWP1Q9H0M0 922 aa13.29□□□□□ -0.28
NUP58-206ENST00000463407 TBC1D12O60347 775 aa13.28□□□□□ -0.28
NUP58-206ENST00000463407 CHN1P15882 459 aa13.28□□□□□ -0.28
NUP58-206ENST00000463407 MRPS6P82932 125 aaKnown RBP13.28□□□□□ -0.28
NUP58-206ENST00000463407 PREPLQ4J6C6 727 aaPredicted RBP13.28□□□□□ -0.28
NUP58-206ENST00000463407 POTEAQ6S8J7 498 aa13.28□□□□□ -0.28
NUP58-206ENST00000463407 WWOXQ9NZC7 414 aa13.28□□□□□ -0.28
NUP58-206ENST00000463407 CTNNB1P35222 781 aa13.28□□□□□ -0.28
NUP58-206ENST00000463407 LRRC74AQ0VAA2 488 aa13.28□□□□□ -0.28
NUP58-206ENST00000463407 TTI2Q6NXR4 508 aa13.28□□□□□ -0.28
NUP58-206ENST00000463407 USP18Q9UMW8 372 aa13.28□□□□□ -0.28
NUP58-206ENST00000463407 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.28□□□□□ -0.28
NUP58-206ENST00000463407 SMAPO00193 183 aa13.28□□□□□ -0.28
NUP58-206ENST00000463407 RTN3O95197 1032 aaPredicted RBP13.28□□□□□ -0.28
NUP58-206ENST00000463407 TAGAPQ8N103 731 aa13.28□□□□□ -0.28
NUP58-206ENST00000463407 SYT17Q9BSW7 474 aa13.28□□□□□ -0.28
NUP58-206ENST00000463407 SYNPO2Q9UMS6 1093 aa13.28□□□□□ -0.28
NUP58-206ENST00000463407 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.28□□□□□ -0.28
NUP58-206ENST00000463407 SPAG6O75602 509 aa13.28□□□□□ -0.28
NUP58-206ENST00000463407 KRT4P19013 534 aa13.28□□□□□ -0.28
NUP58-206ENST00000463407 ADIGQ0VDE8 80 aa13.28□□□□□ -0.28
NUP58-206ENST00000463407 CCNI2Q6ZMN8 369 aaPredicted RBP13.28□□□□□ -0.28
NUP58-206ENST00000463407 TATDN2Q93075 761 aa13.28□□□□□ -0.28
NUP58-206ENST00000463407 NRBF2Q96F24 287 aa13.28□□□□□ -0.28
NUP58-206ENST00000463407 STAMBPL1Q96FJ0 436 aa13.28□□□□□ -0.28
NUP58-206ENST00000463407 TRIM4Q9C037 500 aa13.28□□□□□ -0.28
NUP58-206ENST00000463407 NT5MQ9NPB1 228 aa13.28□□□□□ -0.28
NUP58-206ENST00000463407 PKD2L2Q9NZM6 624 aa13.28□□□□□ -0.28
NUP58-206ENST00000463407 CCR1P32246 355 aa13.28□□□□□ -0.28
NUP58-206ENST00000463407 CTCFP49711 727 aaPredicted RBP13.28□□□□□ -0.28
NUP58-206ENST00000463407 OR2W6PQ8NHA6 318 aa13.28□□□□□ -0.28
NUP58-206ENST00000463407 PURBQ96QR8 312 aaKnown RBP13.28□□□□□ -0.28
NUP58-206ENST00000463407 PDGFCQ9NRA1 345 aa13.28□□□□□ -0.28
NUP58-206ENST00000463407 CHCHD3Q9NX63 227 aaKnown RBP13.28□□□□□ -0.28
NUP58-206ENST00000463407 TSPAN16Q9UKR8 245 aa13.28□□□□□ -0.28
NUP58-206ENST00000463407 RAP1GDS1P52306 607 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms