RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 CYB561D2O14569 222 aa13.44□□□□□ -0.26
VAPB-203ENST00000463370 RNF8O76064 485 aa13.44□□□□□ -0.26
VAPB-203ENST00000463370 BEST1O76090 585 aa13.44□□□□□ -0.26
VAPB-203ENST00000463370 MYZAPP0CAP1 466 aa13.44□□□□□ -0.26
VAPB-203ENST00000463370 LCP1P13796 627 aa13.44□□□□□ -0.26
VAPB-203ENST00000463370 ITIH2P19823 946 aa13.44□□□□□ -0.26
VAPB-203ENST00000463370 GBP1P32455 592 aa13.44□□□□□ -0.26
VAPB-203ENST00000463370 RABGGTBP53611 331 aa13.44□□□□□ -0.26
VAPB-203ENST00000463370 ATXN1P54253 815 aaKnown RBP13.44□□□□□ -0.26
VAPB-203ENST00000463370 SKIDA1Q1XH10 827 aa13.44□□□□□ -0.26
VAPB-203ENST00000463370 KCTD6Q8NC69 237 aa13.44□□□□□ -0.26
VAPB-203ENST00000463370 CD99L2Q8TCZ2 262 aa13.44□□□□□ -0.26
VAPB-203ENST00000463370 NDRG1Q92597 394 aaKnown RBP13.44□□□□□ -0.26
VAPB-203ENST00000463370 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.44□□□□□ -0.26
VAPB-203ENST00000463370 GPATCH2LQ9NWQ4 482 aa13.44□□□□□ -0.26
VAPB-203ENST00000463370 CASTOR2A6NHX0 329 aa13.43□□□□□ -0.26
VAPB-203ENST00000463370 TRPA1O75762 1119 aa13.43□□□□□ -0.26
VAPB-203ENST00000463370 PECAM1P16284 738 aaPredicted RBP13.43□□□□□ -0.26
VAPB-203ENST00000463370 PCK1P35558 622 aa13.43□□□□□ -0.26
VAPB-203ENST00000463370 OTUD4Q01804 1114 aaKnown RBP13.43□□□□□ -0.26
VAPB-203ENST00000463370 BST2Q10589 180 aaKnown RBP13.43□□□□□ -0.26
VAPB-203ENST00000463370 PAQR9Q6ZVX9 377 aa13.43□□□□□ -0.26
VAPB-203ENST00000463370 ZNF365Q70YC5 407 aa13.43□□□□□ -0.26
VAPB-203ENST00000463370 B4GALNT4Q76KP1 1039 aa13.43□□□□□ -0.26
VAPB-203ENST00000463370 FUKQ8N0W3 1084 aa13.43□□□□□ -0.26
VAPB-203ENST00000463370 ALLCQ8N6M5 410 aa13.43□□□□□ -0.26
VAPB-203ENST00000463370 RNF169Q8NCN4 708 aa13.43□□□□□ -0.26
VAPB-203ENST00000463370 B3GALNT2Q8NCR0 500 aa13.43□□□□□ -0.26
VAPB-203ENST00000463370 ACTL9Q8TC94 416 aa13.43□□□□□ -0.26
VAPB-203ENST00000463370 CALN1Q9BXU9 219 aa13.43□□□□□ -0.26
VAPB-203ENST00000463370 ADAM7Q9H2U9 754 aa13.43□□□□□ -0.26
VAPB-203ENST00000463370 FEZ2Q9UHY8 353 aaPredicted RBP13.43□□□□□ -0.26
VAPB-203ENST00000463370 DCAF8L1A6NGE4 600 aa13.43□□□□□ -0.26
VAPB-203ENST00000463370 RIPK2O43353 540 aa13.43□□□□□ -0.26
VAPB-203ENST00000463370 NUDT17P0C025 328 aa13.43□□□□□ -0.26
VAPB-203ENST00000463370 SETSIPP0DME0 302 aa13.43□□□□□ -0.26
VAPB-203ENST00000463370 WARSP23381 471 aaKnown RBP13.43□□□□□ -0.26
VAPB-203ENST00000463370 BCAT1P54687 386 aa13.43□□□□□ -0.26
VAPB-203ENST00000463370 VCPP55072 806 aaKnown RBP13.43□□□□□ -0.26
VAPB-203ENST00000463370 GDF10P55107 478 aa13.43□□□□□ -0.26
VAPB-203ENST00000463370 LPIN1Q14693 890 aa13.43□□□□□ -0.26
VAPB-203ENST00000463370 P3H1Q32P28 736 aa13.43□□□□□ -0.26
VAPB-203ENST00000463370 ZC3H12AQ5D1E8 599 aaKnown RBP13.43□□□□□ -0.26
VAPB-203ENST00000463370 DRICH1Q6PGQ1 229 aaPredicted RBP13.43□□□□□ -0.26
VAPB-203ENST00000463370 RPAINQ86UA6 219 aa13.43□□□□□ -0.26
VAPB-203ENST00000463370 TOP6BLQ8N6T0 577 aa13.43□□□□□ -0.26
VAPB-203ENST00000463370 SLC35B2Q8TB61 432 aa13.43□□□□□ -0.26
VAPB-203ENST00000463370 FAM172AQ8WUF8 416 aa13.43□□□□□ -0.26
VAPB-203ENST00000463370 TSPAN18Q96SJ8 248 aa13.43□□□□□ -0.26
VAPB-203ENST00000463370 MAGEB5Q9BZ81 275 aa13.43□□□□□ -0.26
VAPB-203ENST00000463370 NGRNQ9NPE2 291 aaKnown RBP13.43□□□□□ -0.26
VAPB-203ENST00000463370 BCCIPQ9P287 314 aaKnown RBP eCLIP13.43□□□□□ -0.26
VAPB-203ENST00000463370 THP07101 528 aa13.42□□□□□ -0.26
VAPB-203ENST00000463370 RARGP13631 454 aa13.42□□□□□ -0.26
VAPB-203ENST00000463370 NRLP54845 237 aa13.42□□□□□ -0.26
VAPB-203ENST00000463370 PLCB3Q01970 1234 aa13.42□□□□□ -0.26
VAPB-203ENST00000463370 ACAP1Q15027 740 aa13.42□□□□□ -0.26
VAPB-203ENST00000463370 CA9Q16790 459 aa13.42□□□□□ -0.26
VAPB-203ENST00000463370 KRT71Q3SY84 523 aa13.42□□□□□ -0.26
VAPB-203ENST00000463370 SPDYCQ5MJ68 293 aa13.42□□□□□ -0.26
VAPB-203ENST00000463370 IZUMO3Q5VZ72 239 aa13.42□□□□□ -0.26
VAPB-203ENST00000463370 DENND2CQ68D51 928 aa13.42□□□□□ -0.26
VAPB-203ENST00000463370 SCYL2Q6P3W7 929 aa13.42□□□□□ -0.26
VAPB-203ENST00000463370 NPNTQ6UXI9 565 aa13.42□□□□□ -0.26
VAPB-203ENST00000463370 BBS12Q6ZW61 710 aa13.42□□□□□ -0.26
VAPB-203ENST00000463370 CCDC89Q8N998 374 aa13.42□□□□□ -0.26
VAPB-203ENST00000463370 STK32AQ8WU08 396 aa13.42□□□□□ -0.26
VAPB-203ENST00000463370 NKD2Q969F2 451 aaPredicted RBP13.42□□□□□ -0.26
VAPB-203ENST00000463370 SENP8Q96LD8 212 aa13.42□□□□□ -0.26
VAPB-203ENST00000463370 CDC42EP4Q9H3Q1 356 aaKnown RBP13.42□□□□□ -0.26
VAPB-203ENST00000463370 CHST12Q9NRB3 414 aa13.42□□□□□ -0.26
VAPB-203ENST00000463370 CALCOCO1Q9P1Z2 691 aa13.42□□□□□ -0.26
VAPB-203ENST00000463370 SRRDQ9UH36 339 aa13.42□□□□□ -0.26
VAPB-203ENST00000463370 ANAPC5Q9UJX4 755 aa13.42□□□□□ -0.26
VAPB-203ENST00000463370 I3L4J1 428 aa13.42□□□□□ -0.26
VAPB-203ENST00000463370 GABRDO14764 452 aa13.42□□□□□ -0.26
VAPB-203ENST00000463370 GPR182O15218 404 aa13.42□□□□□ -0.26
VAPB-203ENST00000463370 CAND2O75155 1236 aa13.42□□□□□ -0.26
VAPB-203ENST00000463370 CST5P28325 142 aaPredicted RBP13.42□□□□□ -0.26
VAPB-203ENST00000463370 HPDP32754 393 aaPredicted RBP13.42□□□□□ -0.26
VAPB-203ENST00000463370 ARSEP51690 589 aa13.42□□□□□ -0.26
VAPB-203ENST00000463370 CDH6P55285 790 aa13.42□□□□□ -0.26
VAPB-203ENST00000463370 HDAC4P56524 1084 aa13.42□□□□□ -0.26
VAPB-203ENST00000463370 IFFO1Q0D2I5 559 aa13.42□□□□□ -0.26
VAPB-203ENST00000463370 ITGA7Q13683 1181 aa13.42□□□□□ -0.26
VAPB-203ENST00000463370 PDCD11Q14690 1871 aaKnown RBP13.42□□□□□ -0.26
VAPB-203ENST00000463370 TRIM71Q2Q1W2 868 aaKnown RBP13.42□□□□□ -0.26
VAPB-203ENST00000463370 PAN2Q504Q3 1202 aaKnown RBP13.42□□□□□ -0.26
VAPB-203ENST00000463370 MAP3K21Q5TCX8 1036 aa13.42□□□□□ -0.26
VAPB-203ENST00000463370 TRAIPQ9BWF2 469 aa13.42□□□□□ -0.26
VAPB-203ENST00000463370 GOLGA6L10A6NI86 522 aa13.41□□□□□ -0.26
VAPB-203ENST00000463370 SMIM23A6NLE4 172 aa13.41□□□□□ -0.26
VAPB-203ENST00000463370 HMGB1P1B2RPK0 211 aaPredicted RBP13.41□□□□□ -0.26
VAPB-203ENST00000463370 DPYSL4O14531 572 aa13.41□□□□□ -0.26
VAPB-203ENST00000463370 PRPSAP2O60256 369 aa13.41□□□□□ -0.26
VAPB-203ENST00000463370 ENDOD1O94919 500 aa13.41□□□□□ -0.26
VAPB-203ENST00000463370 ACSL3O95573 720 aa13.41□□□□□ -0.26
VAPB-203ENST00000463370 POMCP01189 267 aa13.41□□□□□ -0.26
VAPB-203ENST00000463370 IFNB1P01574 187 aa13.41□□□□□ -0.26
VAPB-203ENST00000463370 PTPN1P18031 435 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms