RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 TAF10Q12962 218 aa13.89□□□□□ -0.19
HDAC1-203ENST00000463172 CCDC40Q4G0X9 1142 aa13.89□□□□□ -0.19
HDAC1-203ENST00000463172 ARL14EPQ8N8R7 260 aaPredicted RBP13.89□□□□□ -0.19
HDAC1-203ENST00000463172 SLC2A14Q8TDB8 520 aa13.89□□□□□ -0.19
HDAC1-203ENST00000463172 FAM83CQ9BQN1 747 aa13.89□□□□□ -0.19
HDAC1-203ENST00000463172 NACA2Q9H009 215 aa13.89□□□□□ -0.19
HDAC1-203ENST00000463172 SDCBP2Q9H190 292 aa13.89□□□□□ -0.19
HDAC1-203ENST00000463172 GTSE1Q9NYZ3 720 aa13.89□□□□□ -0.19
HDAC1-203ENST00000463172 CCL26Q9Y258 94 aa13.89□□□□□ -0.19
HDAC1-203ENST00000463172 NME7Q9Y5B8 376 aa13.89□□□□□ -0.19
HDAC1-203ENST00000463172 C2orf78A6NCI8 922 aa13.88□□□□□ -0.19
HDAC1-203ENST00000463172 CD58P19256 250 aa13.88□□□□□ -0.19
HDAC1-203ENST00000463172 SLC8A3P57103 927 aa13.88□□□□□ -0.19
HDAC1-203ENST00000463172 USP46P62068 366 aa13.88□□□□□ -0.19
HDAC1-203ENST00000463172 CSTF1Q05048 431 aaKnown RBP13.88□□□□□ -0.19
HDAC1-203ENST00000463172 GRSF1Q12849 480 aaKnown RBP eCLIP13.88□□□□□ -0.19
HDAC1-203ENST00000463172 USP4Q13107 963 aa13.88□□□□□ -0.19
HDAC1-203ENST00000463172 KLHL10Q6JEL2 608 aa13.88□□□□□ -0.19
HDAC1-203ENST00000463172 FOXR2Q6PJQ5 311 aa13.88□□□□□ -0.19
HDAC1-203ENST00000463172 MAMSTRQ6ZN01 415 aa13.88□□□□□ -0.19
HDAC1-203ENST00000463172 FILIP1Q7Z7B0 1213 aa13.88□□□□□ -0.19
HDAC1-203ENST00000463172 ZC3H3Q8IXZ2 948 aaKnown RBP13.88□□□□□ -0.19
HDAC1-203ENST00000463172 TRIML1Q8N9V2 468 aa13.88□□□□□ -0.19
HDAC1-203ENST00000463172 CCDC26Q8TAB7 109 aa13.88□□□□□ -0.19
HDAC1-203ENST00000463172 TTC8Q8TAM2 541 aa13.88□□□□□ -0.19
HDAC1-203ENST00000463172 SH3RF2Q8TEC5 729 aa13.88□□□□□ -0.19
HDAC1-203ENST00000463172 OSCP1Q8WVF1 389 aa13.88□□□□□ -0.19
HDAC1-203ENST00000463172 ATRIPQ8WXE1 791 aa13.88□□□□□ -0.19
HDAC1-203ENST00000463172 ERCC4Q92889 916 aaPredicted RBP13.88□□□□□ -0.19
HDAC1-203ENST00000463172 EEF2KMTQ96G04 330 aa13.88□□□□□ -0.19
HDAC1-203ENST00000463172 LRRC3BQ96PB8 259 aa13.88□□□□□ -0.19
HDAC1-203ENST00000463172 CYP2S1Q96SQ9 504 aa13.88□□□□□ -0.19
HDAC1-203ENST00000463172 PHOX2BQ99453 314 aa13.88□□□□□ -0.19
HDAC1-203ENST00000463172 EBF3Q9H4W6 596 aa13.88□□□□□ -0.19
HDAC1-203ENST00000463172 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.88□□□□□ -0.197e-7■■■■□ 25.7
HDAC1-203ENST00000463172 FAM49BQ9NUQ9 324 aa13.88□□□□□ -0.19
HDAC1-203ENST00000463172 GCNT4Q9P109 453 aa13.88□□□□□ -0.19
HDAC1-203ENST00000463172 MAN1B1Q9UKM7 699 aa13.88□□□□□ -0.19
HDAC1-203ENST00000463172 PCDHGA2Q9Y5H1 932 aa13.88□□□□□ -0.19
HDAC1-203ENST00000463172 PTPRZ1P23471 2315 aaPredicted RBP13.88□□□□□ -0.19
HDAC1-203ENST00000463172 FAM186AA6NE01 2351 aa13.88□□□□□ -0.19
HDAC1-203ENST00000463172 FANCMQ8IYD8 2048 aa13.88□□□□□ -0.19
HDAC1-203ENST00000463172 CILPO75339 1184 aa13.87□□□□□ -0.19
HDAC1-203ENST00000463172 NFATC1O95644 943 aa13.87□□□□□ -0.19
HDAC1-203ENST00000463172 GNA14O95837 355 aa13.87□□□□□ -0.19
HDAC1-203ENST00000463172 MBL2P11226 248 aaPredicted RBP13.87□□□□□ -0.19
HDAC1-203ENST00000463172 CHRNB1P11230 501 aa13.87□□□□□ -0.19
HDAC1-203ENST00000463172 CCDC130P13994 396 aa13.87□□□□□ -0.19
HDAC1-203ENST00000463172 TBXAS1P24557 533 aaPredicted RBP13.87□□□□□ -0.19
HDAC1-203ENST00000463172 ADORA2BP29275 332 aa13.87□□□□□ -0.19
HDAC1-203ENST00000463172 SOX9P48436 509 aa13.87□□□□□ -0.19
HDAC1-203ENST00000463172 TUBP50607 506 aa13.87□□□□□ -0.19
HDAC1-203ENST00000463172 SLC5A3P53794 718 aa13.87□□□□□ -0.19
HDAC1-203ENST00000463172 MAP3K7CLP57077 242 aa13.87□□□□□ -0.19
HDAC1-203ENST00000463172 SLC7A9P82251 487 aa13.87□□□□□ -0.19
HDAC1-203ENST00000463172 TNK2Q07912 1038 aa13.87□□□□□ -0.19
HDAC1-203ENST00000463172 MTAPQ13126 283 aa13.87□□□□□ -0.19
HDAC1-203ENST00000463172 ZNF77Q15935 545 aa13.87□□□□□ -0.19
HDAC1-203ENST00000463172 HECTD3Q5T447 861 aa13.87□□□□□ -0.19
HDAC1-203ENST00000463172 ISM2Q6H9L7 571 aa13.87□□□□□ -0.19
HDAC1-203ENST00000463172 FUKQ8N0W3 1084 aa13.87□□□□□ -0.19
HDAC1-203ENST00000463172 SPEM1Q8N4L4 309 aa13.87□□□□□ -0.19
HDAC1-203ENST00000463172 CYFIP2Q96F07 1278 aa13.87□□□□□ -0.19
HDAC1-203ENST00000463172 KCNK16Q96T55 309 aa13.87□□□□□ -0.19
HDAC1-203ENST00000463172 HNRNPABQ99729 332 aaKnown RBP13.87□□□□□ -0.19
HDAC1-203ENST00000463172 APOBEC3GQ9HC16 384 aaKnown RBP13.87□□□□□ -0.19
HDAC1-203ENST00000463172 CSNK1G1Q9HCP0 422 aa13.87□□□□□ -0.19
HDAC1-203ENST00000463172 PNPLA8Q9NP80 782 aa13.87□□□□□ -0.19
HDAC1-203ENST00000463172 COL4A3Q01955 1670 aa13.86□□□□□ -0.19
HDAC1-203ENST00000463172 TRIM49BA6NDI0 452 aa13.86□□□□□ -0.19
HDAC1-203ENST00000463172 PRR23AA6NEV1 266 aa13.86□□□□□ -0.19
HDAC1-203ENST00000463172 ATG13O75143 517 aa13.86□□□□□ -0.19
HDAC1-203ENST00000463172 GADD45BO75293 160 aaPredicted RBP13.86□□□□□ -0.19
HDAC1-203ENST00000463172 LMNAP02545 664 aaKnown RBP13.86□□□□□ -0.19
HDAC1-203ENST00000463172 CXCL12P48061 93 aa13.86□□□□□ -0.19
HDAC1-203ENST00000463172 CACNA2D1P54289 1103 aa13.86□□□□□ -0.19
HDAC1-203ENST00000463172 GOLGA8FQ08AF8 430 aa13.86□□□□□ -0.19
HDAC1-203ENST00000463172 GOLGA8DPQ0D2H9 430 aa13.86□□□□□ -0.19
HDAC1-203ENST00000463172 PAK1Q13153 545 aa13.86□□□□□ -0.19
HDAC1-203ENST00000463172 ORC1Q13415 861 aa13.86□□□□□ -0.19
HDAC1-203ENST00000463172 MORC3Q14149 939 aa13.86□□□□□ -0.19
HDAC1-203ENST00000463172 PON2Q15165 354 aa13.86□□□□□ -0.19
HDAC1-203ENST00000463172 TADA2BQ86TJ2 420 aa13.86□□□□□ -0.19
HDAC1-203ENST00000463172 NELFBQ8WX92 580 aa13.86□□□□□ -0.19
HDAC1-203ENST00000463172 ELMO3Q96BJ8 720 aa13.86□□□□□ -0.19
HDAC1-203ENST00000463172 HEXIM2Q96MH2 286 aaKnown RBP13.86□□□□□ -0.19
HDAC1-203ENST00000463172 ECT2Q9H8V3 914 aa13.86□□□□□ -0.19
HDAC1-203ENST00000463172 PRMT8Q9NR22 394 aaPredicted RBP13.86□□□□□ -0.19
HDAC1-203ENST00000463172 TLR8Q9NR97 1041 aaKnown RBP13.86□□□□□ -0.19
HDAC1-203ENST00000463172 CISHQ9NSE2 258 aa13.86□□□□□ -0.19
HDAC1-203ENST00000463172 ZSCAN32Q9NX65 697 aa13.86□□□□□ -0.19
HDAC1-203ENST00000463172 TBC1D14Q9P2M4 693 aa13.86□□□□□ -0.19
HDAC1-203ENST00000463172 HMGXB4Q9UGU5 601 aa13.86□□□□□ -0.19
HDAC1-203ENST00000463172 CPQQ9Y646 472 aa13.86□□□□□ -0.19
HDAC1-203ENST00000463172 MYO16Q9Y6X6 1858 aa13.86□□□□□ -0.19
HDAC1-203ENST00000463172 SHISA7A6NL88 538 aa13.85□□□□□ -0.19
HDAC1-203ENST00000463172 LEFTY2O00292 366 aa13.85□□□□□ -0.19
HDAC1-203ENST00000463172 BIN1O00499 593 aa13.85□□□□□ -0.19
HDAC1-203ENST00000463172 TNFRSF10BO14763 440 aa13.85□□□□□ -0.19
HDAC1-203ENST00000463172 P4HA2O15460 535 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms