RNA–Protein interactions for RNA: ENST00000463007.5

HDAC4-208, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-208ENST00000463007 TMPRSS15P98073 1019 aa13□□□□□ -0.33
HDAC4-208ENST00000463007 PTK7Q13308 1070 aa13□□□□□ -0.33
HDAC4-208ENST00000463007 CDO1Q16878 200 aa13□□□□□ -0.33
HDAC4-208ENST00000463007 KBTBD12Q3ZCT8 623 aa13□□□□□ -0.33
HDAC4-208ENST00000463007 NPNTQ6UXI9 565 aa13□□□□□ -0.33
HDAC4-208ENST00000463007 SPOCD1Q6ZMY3 1216 aa13□□□□□ -0.33
HDAC4-208ENST00000463007 ENOSF1Q7L5Y1 443 aa13□□□□□ -0.33
HDAC4-208ENST00000463007 IGDCC3Q8IVU1 814 aa13□□□□□ -0.33
HDAC4-208ENST00000463007 KBTBD2Q8IY47 623 aa13□□□□□ -0.33
HDAC4-208ENST00000463007 CHST13Q8NET6 341 aa13□□□□□ -0.33
HDAC4-208ENST00000463007 INPP5DQ92835 1189 aa13□□□□□ -0.33
HDAC4-208ENST00000463007 ZNF333Q96JL9 665 aa13□□□□□ -0.33
HDAC4-208ENST00000463007 GBP5Q96PP8 586 aa13□□□□□ -0.33
HDAC4-208ENST00000463007 TARS2Q9BW92 718 aaKnown RBP13□□□□□ -0.33
HDAC4-208ENST00000463007 HOXC10Q9NYD6 342 aa13□□□□□ -0.33
HDAC4-208ENST00000463007 XPO7Q9UIA9 1087 aaKnown RBP13□□□□□ -0.33
HDAC4-208ENST00000463007 NUB1Q9Y5A7 615 aa13□□□□□ -0.33
HDAC4-208ENST00000463007 SMAPO00193 183 aa12.99□□□□□ -0.33
HDAC4-208ENST00000463007 OATP04181 439 aa12.99□□□□□ -0.33
HDAC4-208ENST00000463007 INHBAP08476 426 aa12.99□□□□□ -0.33
HDAC4-208ENST00000463007 NOMO3P69849 1222 aa12.99□□□□□ -0.33
HDAC4-208ENST00000463007 TREML2Q5T2D2 321 aa12.99□□□□□ -0.33
HDAC4-208ENST00000463007 UNC45BQ8IWX7 931 aa12.99□□□□□ -0.33
HDAC4-208ENST00000463007 EXD1Q8NHP7 514 aa12.99□□□□□ -0.33
HDAC4-208ENST00000463007 FBXO41Q8TF61 875 aa12.99□□□□□ -0.33
HDAC4-208ENST00000463007 SERAC1Q96JX3 654 aa12.99□□□□□ -0.33
HDAC4-208ENST00000463007 FGD4Q96M96 766 aa12.99□□□□□ -0.33
HDAC4-208ENST00000463007 PIH1D1Q9NWS0 290 aaKnown RBP12.99□□□□□ -0.33
HDAC4-208ENST00000463007 EURLQ9NYK6 297 aa12.99□□□□□ -0.33
HDAC4-208ENST00000463007 RABGEF1Q9UJ41 708 aa12.99□□□□□ -0.33
HDAC4-208ENST00000463007 CEP350Q5VT06 3117 aa12.99□□□□□ -0.33
HDAC4-208ENST00000463007 CNTNAP2Q9UHC6 1331 aa12.99□□□□□ -0.33
HDAC4-208ENST00000463007 MAP3K7O43318 606 aa12.99□□□□□ -0.33
HDAC4-208ENST00000463007 PSMG1O95456 288 aa12.99□□□□□ -0.33
HDAC4-208ENST00000463007 CYP1A1P04798 512 aaPredicted RBP12.99□□□□□ -0.33
HDAC4-208ENST00000463007 ELK3P41970 407 aa12.99□□□□□ -0.33
HDAC4-208ENST00000463007 CNTN2Q02246 1040 aa12.99□□□□□ -0.33
HDAC4-208ENST00000463007 CCDC15Q0P6D6 951 aa12.99□□□□□ -0.33
HDAC4-208ENST00000463007 RASA2Q15283 850 aa12.99□□□□□ -0.33
HDAC4-208ENST00000463007 SLC45A4Q5BKX6 768 aa12.99□□□□□ -0.33
HDAC4-208ENST00000463007 IZUMO2Q6UXV1 221 aa12.99□□□□□ -0.33
HDAC4-208ENST00000463007 RFX6Q8HWS3 928 aa12.99□□□□□ -0.33
HDAC4-208ENST00000463007 ALLCQ8N6M5 410 aa12.99□□□□□ -0.33
HDAC4-208ENST00000463007 UBR7Q8N806 425 aa12.99□□□□□ -0.33
HDAC4-208ENST00000463007 ZNF606Q8WXB4 792 aa12.99□□□□□ -0.33
HDAC4-208ENST00000463007 BTBD7Q9P203 1132 aa12.99□□□□□ -0.33
HDAC4-208ENST00000463007 hCG_2014768A0A024R1R8 64 aa12.98□□□□□ -0.33
HDAC4-208ENST00000463007 H0YCG3 227 aa12.98□□□□□ -0.33
HDAC4-208ENST00000463007 C2CD2LO14523 706 aa12.98□□□□□ -0.33
HDAC4-208ENST00000463007 GRAP2O75791 330 aa12.98□□□□□ -0.33
HDAC4-208ENST00000463007 FARP2O94887 1054 aaPredicted RBP12.98□□□□□ -0.33
HDAC4-208ENST00000463007 NAMPTP43490 491 aa12.98□□□□□ -0.33
HDAC4-208ENST00000463007 PEX6Q13608 980 aa12.98□□□□□ -0.33
HDAC4-208ENST00000463007 USP37Q86T82 979 aa12.98□□□□□ -0.33
HDAC4-208ENST00000463007 RBAKQ9NYW8 714 aaPredicted RBP12.98□□□□□ -0.33
HDAC4-208ENST00000463007 G3BP2Q9UN86 482 aaKnown RBP12.98□□□□□ -0.33
HDAC4-208ENST00000463007 DNAH12Q6ZR08 3092 aa12.98□□□□□ -0.33
HDAC4-208ENST00000463007 TCEA3O75764 348 aa12.98□□□□□ -0.33
HDAC4-208ENST00000463007 TMEM63AO94886 807 aa12.98□□□□□ -0.33
HDAC4-208ENST00000463007 PSMA2P25787 234 aa12.98□□□□□ -0.33
HDAC4-208ENST00000463007 CUL2Q13617 745 aa12.98□□□□□ -0.33
HDAC4-208ENST00000463007 RNASEH2BQ5TBB1 312 aaKnown RBP12.98□□□□□ -0.33
HDAC4-208ENST00000463007 C1orf146Q5VVC0 180 aa12.98□□□□□ -0.33
HDAC4-208ENST00000463007 KATNAL2Q8IYT4 538 aa12.98□□□□□ -0.33
HDAC4-208ENST00000463007 ABRAQ8N0Z2 381 aa12.98□□□□□ -0.33
HDAC4-208ENST00000463007 TEX9Q8N6V9 391 aa12.98□□□□□ -0.33
HDAC4-208ENST00000463007 PYDC1Q8WXC3 89 aa12.98□□□□□ -0.33
HDAC4-208ENST00000463007 AVENQ9NQS1 362 aaPredicted RBP12.98□□□□□ -0.33
HDAC4-208ENST00000463007 PARVAQ9NVD7 372 aa12.98□□□□□ -0.33
HDAC4-208ENST00000463007 A0A0B4J269 797 aa12.97□□□□□ -0.33
HDAC4-208ENST00000463007 PRPF4O43172 522 aaKnown RBP eCLIP12.97□□□□□ -0.338e-7■■□□□ 12.1
HDAC4-208ENST00000463007 PSTPIP1O43586 416 aa12.97□□□□□ -0.33
HDAC4-208ENST00000463007 UGT1A9O60656 530 aa12.97□□□□□ -0.33
HDAC4-208ENST00000463007 OPHN1O60890 802 aa12.97□□□□□ -0.33
HDAC4-208ENST00000463007 SORBS2O94875 1100 aaKnown RBP12.97□□□□□ -0.33
HDAC4-208ENST00000463007 CST3P01034 146 aaPredicted RBP12.97□□□□□ -0.33
HDAC4-208ENST00000463007 KRT19P08727 400 aa12.97□□□□□ -0.33
HDAC4-208ENST00000463007 UBA1P22314 1058 aaKnown RBP12.97□□□□□ -0.33
HDAC4-208ENST00000463007 ATXN3P54252 364 aaPredicted RBP12.97□□□□□ -0.33
HDAC4-208ENST00000463007 VCPP55072 806 aaKnown RBP12.97□□□□□ -0.33
HDAC4-208ENST00000463007 MMRN1Q13201 1228 aa12.97□□□□□ -0.33
HDAC4-208ENST00000463007 VGLL4Q14135 290 aa12.97□□□□□ -0.33
HDAC4-208ENST00000463007 BSPRYQ5W0U4 402 aa12.97□□□□□ -0.33
HDAC4-208ENST00000463007 C1orf228Q6PIY5 440 aa12.97□□□□□ -0.33
HDAC4-208ENST00000463007 CDHR3Q6ZTQ4 885 aa12.97□□□□□ -0.33
HDAC4-208ENST00000463007 RIOX2Q8IUF8 465 aa12.97□□□□□ -0.33
HDAC4-208ENST00000463007 PDIK1LQ8N165 341 aa12.97□□□□□ -0.33
HDAC4-208ENST00000463007 PPP1R14CQ8TAE6 165 aa12.97□□□□□ -0.33
HDAC4-208ENST00000463007 AGR3Q8TD06 166 aa12.97□□□□□ -0.33
HDAC4-208ENST00000463007 TTC25Q96NG3 672 aa12.97□□□□□ -0.33
HDAC4-208ENST00000463007 UGT1A7Q9HAW7 530 aa12.97□□□□□ -0.33
HDAC4-208ENST00000463007 UGT1A10Q9HAW8 530 aa12.97□□□□□ -0.33
HDAC4-208ENST00000463007 UGT1A8Q9HAW9 530 aa12.97□□□□□ -0.33
HDAC4-208ENST00000463007 AGO2Q9UKV8 859 aaKnown RBP12.97□□□□□ -0.33
HDAC4-208ENST00000463007 HEY1Q9Y5J3 304 aa12.97□□□□□ -0.33
HDAC4-208ENST00000463007 MAD1L1Q9Y6D9 718 aa12.97□□□□□ -0.33
HDAC4-208ENST00000463007 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.97□□□□□ -0.33
HDAC4-208ENST00000463007 SOWAHBA6NEL2 793 aa12.97□□□□□ -0.33
HDAC4-208ENST00000463007 KBTBD13C9JR72 458 aa12.97□□□□□ -0.33
HDAC4-208ENST00000463007 PEX10O60683 326 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms