RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 MUTP22033 750 aa3.36□□□□□ -1.87
SMC4-203ENST00000462668 CCR9P51686 369 aa3.36□□□□□ -1.87
SMC4-203ENST00000462668 JAG1P78504 1218 aa3.36□□□□□ -1.87
SMC4-203ENST00000462668 MTAPQ13126 283 aa3.36□□□□□ -1.87
SMC4-203ENST00000462668 AIMP2Q13155 320 aaKnown RBP3.36□□□□□ -1.87
SMC4-203ENST00000462668 ACOX1Q15067 660 aa3.36□□□□□ -1.87
SMC4-203ENST00000462668 INSCQ1MX18 579 aa3.36□□□□□ -1.87
SMC4-203ENST00000462668 CCDC157Q569K6 752 aa3.36□□□□□ -1.87
SMC4-203ENST00000462668 TREML4Q6UXN2 200 aa3.36□□□□□ -1.87
SMC4-203ENST00000462668 STPG3Q8N7X2 389 aa3.36□□□□□ -1.87
SMC4-203ENST00000462668 FLAD1Q8NFF5 587 aa3.36□□□□□ -1.87
SMC4-203ENST00000462668 LRRC46Q96FV0 321 aa3.36□□□□□ -1.87
SMC4-203ENST00000462668 PERPQ96FX8 193 aa3.36□□□□□ -1.87
SMC4-203ENST00000462668 FEM1CQ96JP0 617 aa3.36□□□□□ -1.87
SMC4-203ENST00000462668 KLHL32Q96NJ5 620 aa3.36□□□□□ -1.87
SMC4-203ENST00000462668 NCAPGQ9BPX3 1015 aa3.36□□□□□ -1.87
SMC4-203ENST00000462668 SDF4Q9BRK5 362 aa3.36□□□□□ -1.87
SMC4-203ENST00000462668 GPATCH1Q9BRR8 931 aaKnown RBP3.36□□□□□ -1.87
SMC4-203ENST00000462668 MRPS18AQ9NVS2 196 aaKnown RBP3.36□□□□□ -1.87
SMC4-203ENST00000462668 CFDP1Q9UEE9 299 aaPredicted RBP3.36□□□□□ -1.87
SMC4-203ENST00000462668 ADAMTS8Q9UP79 889 aa3.36□□□□□ -1.87
SMC4-203ENST00000462668 SLC38A8A6NNN8 435 aa3.36□□□□□ -1.87
SMC4-203ENST00000462668 TRIM13O60858 407 aa3.36□□□□□ -1.87
SMC4-203ENST00000462668 ATICP31939 592 aa3.36□□□□□ -1.87
SMC4-203ENST00000462668 GSK3AP49840 483 aa3.36□□□□□ -1.87
SMC4-203ENST00000462668 DGKEP52429 567 aa3.36□□□□□ -1.87
SMC4-203ENST00000462668 BCAT1P54687 386 aa3.36□□□□□ -1.87
SMC4-203ENST00000462668 NLRP5P59047 1200 aa3.36□□□□□ -1.87
SMC4-203ENST00000462668 CAMK1Q14012 370 aa3.36□□□□□ -1.87
SMC4-203ENST00000462668 PSMD6Q15008 389 aa3.36□□□□□ -1.87
SMC4-203ENST00000462668 SEC23BQ15437 767 aa3.36□□□□□ -1.87
SMC4-203ENST00000462668 C11orf88Q6PI97 169 aa3.36□□□□□ -1.87
SMC4-203ENST00000462668 RTL10Q7L3V2 364 aa3.36□□□□□ -1.87
SMC4-203ENST00000462668 B3GNT8Q7Z7M8 397 aa3.36□□□□□ -1.87
SMC4-203ENST00000462668 ZNF713Q8N859 430 aaPredicted RBP3.36□□□□□ -1.87
SMC4-203ENST00000462668 PTGR2Q8N8N7 351 aaPredicted RBP3.36□□□□□ -1.87
SMC4-203ENST00000462668 CEP70Q8NHQ1 597 aa3.36□□□□□ -1.87
SMC4-203ENST00000462668 SUN3Q8TAQ9 357 aa3.36□□□□□ -1.87
SMC4-203ENST00000462668 RSPH1Q8WYR4 309 aa3.36□□□□□ -1.87
SMC4-203ENST00000462668 CLSTN3Q9BQT9 956 aa3.36□□□□□ -1.87
SMC4-203ENST00000462668 TACO1Q9BSH4 297 aaKnown RBP3.36□□□□□ -1.87
SMC4-203ENST00000462668 HERC2P3Q9BVR0 1158 aa3.36□□□□□ -1.87
SMC4-203ENST00000462668 WSB2Q9NYS7 404 aaPredicted RBP3.36□□□□□ -1.87
SMC4-203ENST00000462668 ERCC6L2Q5T890 1561 aa3.36□□□□□ -1.87
SMC4-203ENST00000462668 ABLIM1O14639 778 aa3.36□□□□□ -1.87
SMC4-203ENST00000462668 ADAM20O43506 726 aa3.36□□□□□ -1.87
SMC4-203ENST00000462668 TULP3O75386 442 aa3.36□□□□□ -1.87
SMC4-203ENST00000462668 QDPRP09417 244 aa3.36□□□□□ -1.87
SMC4-203ENST00000462668 ZNF28P17035 718 aa3.36□□□□□ -1.87
SMC4-203ENST00000462668 CLCN2P51788 898 aa3.36□□□□□ -1.87
SMC4-203ENST00000462668 ZNF41P51814 821 aaPredicted RBP3.36□□□□□ -1.87
SMC4-203ENST00000462668 MXRA7P84157 204 aa3.36□□□□□ -1.87
SMC4-203ENST00000462668 IKZF1Q13422 519 aa3.36□□□□□ -1.87
SMC4-203ENST00000462668 SOWAHCQ53LP3 525 aaPredicted RBP3.36□□□□□ -1.87
SMC4-203ENST00000462668 ZNF766Q5HY98 468 aa3.36□□□□□ -1.87
SMC4-203ENST00000462668 AFMIDQ63HM1 303 aa3.36□□□□□ -1.87
SMC4-203ENST00000462668 FAM90A2PQ658T7 463 aa3.36□□□□□ -1.87
SMC4-203ENST00000462668 SLC15A4Q8N697 577 aa3.36□□□□□ -1.87
SMC4-203ENST00000462668 CCDC150Q8NCX0 1101 aa3.36□□□□□ -1.87
SMC4-203ENST00000462668 TMIEQ8NEW7 156 aa3.36□□□□□ -1.87
SMC4-203ENST00000462668 CSGALNACT1Q8TDX6 532 aa3.36□□□□□ -1.87
SMC4-203ENST00000462668 APOPT1Q96IL0 206 aa3.36□□□□□ -1.87
SMC4-203ENST00000462668 FIZ1Q96SL8 496 aa3.36□□□□□ -1.87
SMC4-203ENST00000462668 NRDE2Q9H7Z3 1164 aa3.36□□□□□ -1.87
SMC4-203ENST00000462668 ING3Q9NXR8 418 aa3.36□□□□□ -1.87
SMC4-203ENST00000462668 TMOD4Q9NZQ9 345 aa3.36□□□□□ -1.87
SMC4-203ENST00000462668 MAGED1Q9Y5V3 778 aaPredicted RBP3.36□□□□□ -1.87
SMC4-203ENST00000462668 MBD3L5A6NJ08 208 aaPredicted RBP3.36□□□□□ -1.87
SMC4-203ENST00000462668 A8MZ25 164 aa3.36□□□□□ -1.87
SMC4-203ENST00000462668 GTPBP1O00178 669 aaKnown RBP3.36□□□□□ -1.87
SMC4-203ENST00000462668 CHL1O00533 1208 aa3.36□□□□□ -1.87
SMC4-203ENST00000462668 FAM200BP0CF97 657 aa3.36□□□□□ -1.87
SMC4-203ENST00000462668 DENND1BQ6P3S1 775 aa3.36□□□□□ -1.87
SMC4-203ENST00000462668 VSIG1Q86XK7 387 aa3.36□□□□□ -1.87
SMC4-203ENST00000462668 CCDC117Q8IWD4 279 aaPredicted RBP3.36□□□□□ -1.87
SMC4-203ENST00000462668 ZDHHC14Q8IZN3 488 aa3.36□□□□□ -1.87
SMC4-203ENST00000462668 AFAP1L1Q8TED9 768 aa3.36□□□□□ -1.87
SMC4-203ENST00000462668 TNPO1Q92973 898 aaKnown RBP3.36□□□□□ -1.87
SMC4-203ENST00000462668 EYA3Q99504 573 aa3.36□□□□□ -1.87
SMC4-203ENST00000462668 LDAHQ9H6V9 325 aa3.36□□□□□ -1.87
SMC4-203ENST00000462668 HSF4Q9ULV5 492 aa3.36□□□□□ -1.87
SMC4-203ENST00000462668 PCDHA5Q9Y5H7 936 aa3.36□□□□□ -1.87
SMC4-203ENST00000462668 ZMYM3Q14202 1370 aa3.36□□□□□ -1.87
SMC4-203ENST00000462668 SLC22A3O75751 556 aa3.35□□□□□ -1.87
SMC4-203ENST00000462668 RPP40O75818 363 aaKnown RBP3.35□□□□□ -1.87
SMC4-203ENST00000462668 ARL4AP40617 200 aa3.35□□□□□ -1.87
SMC4-203ENST00000462668 MAGEA10P43363 369 aaPredicted RBP3.35□□□□□ -1.87
SMC4-203ENST00000462668 DDR1Q08345 913 aa3.35□□□□□ -1.87
SMC4-203ENST00000462668 SLC12A1Q13621 1099 aa3.35□□□□□ -1.87
SMC4-203ENST00000462668 HAUS3Q68CZ6 603 aa3.35□□□□□ -1.87
SMC4-203ENST00000462668 DRICH1Q6PGQ1 229 aaPredicted RBP3.35□□□□□ -1.87
SMC4-203ENST00000462668 LARP4Q71RC2 724 aaKnown RBP eCLIP3.35□□□□□ -1.871e-17■□□□□ 10.1
SMC4-203ENST00000462668 GALNT13Q8IUC8 556 aa3.35□□□□□ -1.87
SMC4-203ENST00000462668 SLC6A15Q9H2J7 730 aa3.35□□□□□ -1.87
SMC4-203ENST00000462668 RXFP1Q9HBX9 757 aa3.35□□□□□ -1.87
SMC4-203ENST00000462668 SEPSECSQ9HD40 501 aaKnown RBP3.35□□□□□ -1.87
SMC4-203ENST00000462668 LYVE1Q9Y5Y7 322 aa3.35□□□□□ -1.87
SMC4-203ENST00000462668 B4DLN1 442 aa3.35□□□□□ -1.87
SMC4-203ENST00000462668 CD3EAPO15446 510 aaKnown RBP3.35□□□□□ -1.87
SMC4-203ENST00000462668 SLC7A4O43246 635 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms