RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 PLA2G2CQ5R387 149 aa16.37■□□□□ 0.21
SKA3-204ENST00000462482 FOXD4L5Q5VV16 416 aaPredicted RBP16.37■□□□□ 0.21
SKA3-204ENST00000462482 RNF43Q68DV7 783 aa16.37■□□□□ 0.21
SKA3-204ENST00000462482 SHC4Q6S5L8 630 aa16.37■□□□□ 0.21
SKA3-204ENST00000462482 TTC30AQ86WT1 665 aa16.37■□□□□ 0.21
SKA3-204ENST00000462482 CEP57L1Q8IYX8 460 aa16.37■□□□□ 0.21
SKA3-204ENST00000462482 NUP93Q8N1F7 819 aa16.37■□□□□ 0.21
SKA3-204ENST00000462482 USP33Q8TEY7 942 aa16.37■□□□□ 0.21
SKA3-204ENST00000462482 SCFD1Q8WVM8 642 aa16.37■□□□□ 0.21
SKA3-204ENST00000462482 FOXD4L4Q8WXT5 416 aaPredicted RBP16.37■□□□□ 0.21
SKA3-204ENST00000462482 FBXO32Q969P5 355 aa16.37■□□□□ 0.21
SKA3-204ENST00000462482 PNKPQ96T60 521 aa16.37■□□□□ 0.21
SKA3-204ENST00000462482 DUSP15Q9H1R2 295 aaPredicted RBP16.37■□□□□ 0.21
SKA3-204ENST00000462482 CFAP97Q9P2B7 532 aa16.37■□□□□ 0.21
SKA3-204ENST00000462482 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.36■□□□□ 0.21
SKA3-204ENST00000462482 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.36■□□□□ 0.21
SKA3-204ENST00000462482 CAVIN2O95810 425 aa16.36■□□□□ 0.21
SKA3-204ENST00000462482 APODP05090 189 aa16.36■□□□□ 0.21
SKA3-204ENST00000462482 CYP17A1P05093 508 aa16.36■□□□□ 0.21
SKA3-204ENST00000462482 P4HA1P13674 534 aa16.36■□□□□ 0.21
SKA3-204ENST00000462482 OPRD1P41143 372 aa16.36■□□□□ 0.21
SKA3-204ENST00000462482 MYL6P60660 151 aa16.36■□□□□ 0.21
SKA3-204ENST00000462482 MRPS21P82921 87 aaKnown RBP16.36■□□□□ 0.21
SKA3-204ENST00000462482 DHCR24Q15392 516 aa16.36■□□□□ 0.21
SKA3-204ENST00000462482 KNOP1Q1ED39 458 aaKnown RBP16.36■□□□□ 0.21
SKA3-204ENST00000462482 ZNF699Q32M78 642 aa16.36■□□□□ 0.21
SKA3-204ENST00000462482 PREPLQ4J6C6 727 aaPredicted RBP16.36■□□□□ 0.21
SKA3-204ENST00000462482 ZNF667Q5HYK9 610 aa16.36■□□□□ 0.21
SKA3-204ENST00000462482 BTBD8Q5XKL5 378 aa16.36■□□□□ 0.21
SKA3-204ENST00000462482 ANO7Q6IWH7 933 aa16.36■□□□□ 0.21
SKA3-204ENST00000462482 NUDT18Q6ZVK8 323 aa16.36■□□□□ 0.21
SKA3-204ENST00000462482 C12orf56Q8IXR9 622 aa16.36■□□□□ 0.21
SKA3-204ENST00000462482 ADGRG2Q8IZP9 1017 aa16.36■□□□□ 0.21
SKA3-204ENST00000462482 OVCA2Q8WZ82 227 aa16.36■□□□□ 0.21
SKA3-204ENST00000462482 EZH1Q92800 747 aaPredicted RBP16.36■□□□□ 0.21
SKA3-204ENST00000462482 ZNF518BQ9C0D4 1074 aa16.36■□□□□ 0.21
SKA3-204ENST00000462482 NACA2Q9H009 215 aa16.36■□□□□ 0.21
SKA3-204ENST00000462482 BLZF1Q9H2G9 400 aa16.36■□□□□ 0.21
SKA3-204ENST00000462482 DPEP3Q9H4B8 488 aa16.36■□□□□ 0.21
SKA3-204ENST00000462482 SLC39A2Q9NP94 309 aa16.36■□□□□ 0.21
SKA3-204ENST00000462482 ANGPTL2Q9UKU9 493 aa16.36■□□□□ 0.21
SKA3-204ENST00000462482 MMP17Q9ULZ9 603 aa16.36■□□□□ 0.21
SKA3-204ENST00000462482 BCLAF3A2AJT9 711 aaKnown RBP16.35■□□□□ 0.21
SKA3-204ENST00000462482 DCLK1O15075 740 aa16.35■□□□□ 0.21
SKA3-204ENST00000462482 OAS1P00973 400 aaKnown RBP16.35■□□□□ 0.21
SKA3-204ENST00000462482 EIF2DP41214 584 aaKnown RBP16.35■□□□□ 0.21
SKA3-204ENST00000462482 AFMP43652 599 aa16.35■□□□□ 0.21
SKA3-204ENST00000462482 BMT2Q1RMZ1 405 aa16.35■□□□□ 0.21
SKA3-204ENST00000462482 FOXD4L6Q3SYB3 417 aaPredicted RBP16.35■□□□□ 0.21
SKA3-204ENST00000462482 HSF5Q4G112 596 aaPredicted RBP16.35■□□□□ 0.21
SKA3-204ENST00000462482 HECTD3Q5T447 861 aa16.35■□□□□ 0.21
SKA3-204ENST00000462482 FOXD4L3Q6VB84 417 aaPredicted RBP16.35■□□□□ 0.21
SKA3-204ENST00000462482 CCDC33Q8N5R6 958 aa16.35■□□□□ 0.21
SKA3-204ENST00000462482 OTUB2Q96DC9 234 aa16.35■□□□□ 0.21
SKA3-204ENST00000462482 CNOT6LQ96LI5 555 aaKnown RBP16.35■□□□□ 0.21
SKA3-204ENST00000462482 EDEM2Q9BV94 578 aa16.35■□□□□ 0.21
SKA3-204ENST00000462482 B3GNT5Q9BYG0 378 aa16.35■□□□□ 0.21
SKA3-204ENST00000462482 TPSD1Q9BZJ3 242 aa16.35■□□□□ 0.21
SKA3-204ENST00000462482 RNF38Q9H0F5 515 aa16.35■□□□□ 0.21
SKA3-204ENST00000462482 SMOC1Q9H4F8 434 aa16.35■□□□□ 0.21
SKA3-204ENST00000462482 POLMQ9NP87 494 aaPredicted RBP16.35■□□□□ 0.21
SKA3-204ENST00000462482 DMAP1Q9NPF5 467 aaPredicted RBP16.35■□□□□ 0.21
SKA3-204ENST00000462482 CFAP45Q9UL16 551 aa16.35■□□□□ 0.21
SKA3-204ENST00000462482 CIZ1Q9ULV3 898 aaPredicted RBP16.35■□□□□ 0.21
SKA3-204ENST00000462482 INVSQ9Y283 1065 aa16.35■□□□□ 0.21
SKA3-204ENST00000462482 SH3BP1Q9Y3L3 701 aa16.35■□□□□ 0.21
SKA3-204ENST00000462482 ANK1P16157 1881 aa16.34■□□□□ 0.21
SKA3-204ENST00000462482 E2F8A0AVK6 867 aa16.34■□□□□ 0.21
SKA3-204ENST00000462482 K7EQS6 105 aa16.34■□□□□ 0.21
SKA3-204ENST00000462482 CLDN5O00501 218 aa16.34■□□□□ 0.21
SKA3-204ENST00000462482 KHNYNO15037 678 aaKnown RBP16.34■□□□□ 0.21
SKA3-204ENST00000462482 MAP3K13O43283 966 aa16.34■□□□□ 0.21
SKA3-204ENST00000462482 KAT7O95251 611 aa16.34■□□□□ 0.21
SKA3-204ENST00000462482 OLFM2O95897 454 aa16.34■□□□□ 0.21
SKA3-204ENST00000462482 ADH5P11766 374 aa16.34■□□□□ 0.21
SKA3-204ENST00000462482 GRIA2P42262 883 aa16.34■□□□□ 0.21
SKA3-204ENST00000462482 BYSLQ13895 437 aaKnown RBP16.34■□□□□ 0.21
SKA3-204ENST00000462482 ST3GAL2Q16842 350 aa16.34■□□□□ 0.21
SKA3-204ENST00000462482 EOGTQ5NDL2 527 aa16.34■□□□□ 0.21
SKA3-204ENST00000462482 DAB2IPQ5VWQ8 1189 aa16.34■□□□□ 0.21
SKA3-204ENST00000462482 ATL3Q6DD88 541 aa16.34■□□□□ 0.21
SKA3-204ENST00000462482 CYP2U1Q7Z449 544 aa16.34■□□□□ 0.21
SKA3-204ENST00000462482 HSCBQ8IWL3 235 aa16.34■□□□□ 0.21
SKA3-204ENST00000462482 SPACA7Q96KW9 195 aa16.34■□□□□ 0.21
SKA3-204ENST00000462482 ARHGEF4Q9NR80 690 aa16.34■□□□□ 0.21
SKA3-204ENST00000462482 EXOC1Q9NV70 894 aa16.34■□□□□ 0.21
SKA3-204ENST00000462482 BCCIPQ9P287 314 aaKnown RBP eCLIP16.34■□□□□ 0.21
SKA3-204ENST00000462482 DNAH14Q0VDD8 3507 aa16.33■□□□□ 0.21
SKA3-204ENST00000462482 SCAMP3O14828 347 aaKnown RBP16.33■□□□□ 0.2
SKA3-204ENST00000462482 KLF8O95600 359 aaPredicted RBP16.33■□□□□ 0.2
SKA3-204ENST00000462482 ZSCAN22P10073 491 aaPredicted RBP16.33■□□□□ 0.2
SKA3-204ENST00000462482 CASP1P29466 404 aa16.33■□□□□ 0.2
SKA3-204ENST00000462482 TIE1P35590 1138 aa16.33■□□□□ 0.2
SKA3-204ENST00000462482 ZXDBP98169 803 aa16.33■□□□□ 0.2
SKA3-204ENST00000462482 GAD2Q05329 585 aa16.33■□□□□ 0.2
SKA3-204ENST00000462482 EHHADHQ08426 723 aa16.33■□□□□ 0.2
SKA3-204ENST00000462482 NCOA4Q13772 614 aa16.33■□□□□ 0.2
SKA3-204ENST00000462482 CRY1Q16526 586 aa16.33■□□□□ 0.2
SKA3-204ENST00000462482 SCARA5Q6ZMJ2 495 aa16.33■□□□□ 0.2
SKA3-204ENST00000462482 FAM35AQ86V20 835 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms