RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 SH3RF2Q8TEC5 729 aa9.47□□□□□ -0.89
DDX39B-216ENST00000462421 TMEM176AQ96HP8 235 aa9.47□□□□□ -0.89
DDX39B-216ENST00000462421 SLC46A2Q9BY10 475 aa9.47□□□□□ -0.89
DDX39B-216ENST00000462421 LRRC3Q9BY71 257 aa9.47□□□□□ -0.89
DDX39B-216ENST00000462421 B3GNT5Q9BYG0 378 aa9.47□□□□□ -0.89
DDX39B-216ENST00000462421 PLA2G2FQ9BZM2 168 aa9.47□□□□□ -0.89
DDX39B-216ENST00000462421 SMG9Q9H0W8 520 aaKnown RBP9.47□□□□□ -0.89
DDX39B-216ENST00000462421 LRRC4Q9HBW1 653 aa9.47□□□□□ -0.89
DDX39B-216ENST00000462421 GKN1Q9NS71 199 aa9.47□□□□□ -0.89
DDX39B-216ENST00000462421 KIAA1468Q9P260 1216 aa9.47□□□□□ -0.89
DDX39B-216ENST00000462421 KIAA1257Q9ULG3 409 aa9.47□□□□□ -0.89
DDX39B-216ENST00000462421 ARHGAP26Q9UNA1 814 aa9.47□□□□□ -0.89
DDX39B-216ENST00000462421 C2orf16Q68DN1 1984 aa9.46□□□□□ -0.89
DDX39B-216ENST00000462421 TRIM49BA6NDI0 452 aa9.46□□□□□ -0.9
DDX39B-216ENST00000462421 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.46□□□□□ -0.9
DDX39B-216ENST00000462421 MED7O43513 233 aa9.46□□□□□ -0.9
DDX39B-216ENST00000462421 HCRTO43612 131 aa9.46□□□□□ -0.9
DDX39B-216ENST00000462421 GADD45BO75293 160 aaPredicted RBP9.46□□□□□ -0.9
DDX39B-216ENST00000462421 CILPO75339 1184 aa9.46□□□□□ -0.9
DDX39B-216ENST00000462421 MOSPD3O75425 235 aa9.46□□□□□ -0.9
DDX39B-216ENST00000462421 PRAMEF12O95522 483 aa9.46□□□□□ -0.9
DDX39B-216ENST00000462421 KRT5P13647 590 aa9.46□□□□□ -0.9
DDX39B-216ENST00000462421 HMGA1P17096 107 aaKnown RBP9.46□□□□□ -0.9
DDX39B-216ENST00000462421 NPR3P17342 541 aa9.46□□□□□ -0.9
DDX39B-216ENST00000462421 ACO1P21399 889 aaKnown RBP9.46□□□□□ -0.9
DDX39B-216ENST00000462421 CD72P21854 359 aa9.46□□□□□ -0.9
DDX39B-216ENST00000462421 TUBP50607 506 aa9.46□□□□□ -0.9
DDX39B-216ENST00000462421 BCAT1P54687 386 aa9.46□□□□□ -0.9
DDX39B-216ENST00000462421 STX17P56962 302 aa9.46□□□□□ -0.9
DDX39B-216ENST00000462421 SNX16P57768 344 aa9.46□□□□□ -0.9
DDX39B-216ENST00000462421 CSTF1Q05048 431 aaKnown RBP9.46□□□□□ -0.9
DDX39B-216ENST00000462421 PPP3CAQ08209 521 aa9.46□□□□□ -0.9
DDX39B-216ENST00000462421 INCA1Q0VD86 236 aa9.46□□□□□ -0.9
DDX39B-216ENST00000462421 LRMPQ12912 555 aa9.46□□□□□ -0.9
DDX39B-216ENST00000462421 ORC1Q13415 861 aa9.46□□□□□ -0.9
DDX39B-216ENST00000462421 CUL2Q13617 745 aa9.46□□□□□ -0.9
DDX39B-216ENST00000462421 MORC3Q14149 939 aa9.46□□□□□ -0.9
DDX39B-216ENST00000462421 FBXO43Q4G163 708 aa9.46□□□□□ -0.9
DDX39B-216ENST00000462421 FOXR2Q6PJQ5 311 aa9.46□□□□□ -0.9
DDX39B-216ENST00000462421 SASS6Q6UVJ0 657 aa9.46□□□□□ -0.9
DDX39B-216ENST00000462421 LIMS2Q7Z4I7 341 aa9.46□□□□□ -0.9
DDX39B-216ENST00000462421 CRYBG2Q8N1P7 616 aa9.46□□□□□ -0.9
DDX39B-216ENST00000462421 SYNPOQ8N3V7 929 aa9.46□□□□□ -0.9
DDX39B-216ENST00000462421 SPATA20Q8TB22 786 aa9.46□□□□□ -0.9
DDX39B-216ENST00000462421 PLEKHO2Q8TD55 490 aa9.46□□□□□ -0.9
DDX39B-216ENST00000462421 OSCP1Q8WVF1 389 aa9.46□□□□□ -0.9
DDX39B-216ENST00000462421 PKMYT1Q99640 499 aa9.46□□□□□ -0.9
DDX39B-216ENST00000462421 HNRNPABQ99729 332 aaKnown RBP9.46□□□□□ -0.9
DDX39B-216ENST00000462421 TTLL2Q9BWV7 592 aa9.46□□□□□ -0.9
DDX39B-216ENST00000462421 SRRTQ9BXP5 876 aaKnown RBP9.46□□□□□ -0.9
DDX39B-216ENST00000462421 FAM126AQ9BYI3 521 aaPredicted RBP9.46□□□□□ -0.9
DDX39B-216ENST00000462421 EBF3Q9H4W6 596 aa9.46□□□□□ -0.9
DDX39B-216ENST00000462421 LMAN1LQ9HAT1 526 aa9.46□□□□□ -0.9
DDX39B-216ENST00000462421 IL21Q9HBE4 155 aa9.46□□□□□ -0.9
DDX39B-216ENST00000462421 PNPLA8Q9NP80 782 aa9.46□□□□□ -0.9
DDX39B-216ENST00000462421 CISHQ9NSE2 258 aa9.46□□□□□ -0.9
DDX39B-216ENST00000462421 SMPD4Q9NXE4 827 aa9.46□□□□□ -0.9
DDX39B-216ENST00000462421 RWDD2AQ9UIY3 292 aa9.46□□□□□ -0.9
DDX39B-216ENST00000462421 FBXO4Q9UKT5 387 aa9.46□□□□□ -0.9
DDX39B-216ENST00000462421 SLC8A2Q9UPR5 921 aa9.46□□□□□ -0.9
DDX39B-216ENST00000462421 PCDHB4Q9Y5E5 795 aa9.46□□□□□ -0.9
DDX39B-216ENST00000462421 CPQQ9Y646 472 aa9.46□□□□□ -0.9
DDX39B-216ENST00000462421 ZNF840PA6NDX5 716 aa9.45□□□□□ -0.9
DDX39B-216ENST00000462421 PI15O43692 258 aa9.45□□□□□ -0.9
DDX39B-216ENST00000462421 GFRA3O60609 400 aa9.45□□□□□ -0.9
DDX39B-216ENST00000462421 MBD3O95983 291 aa9.45□□□□□ -0.9
DDX39B-216ENST00000462421 VDRP11473 427 aa9.45□□□□□ -0.9
DDX39B-216ENST00000462421 DRD1P21728 446 aa9.45□□□□□ -0.9
DDX39B-216ENST00000462421 TARSP26639 723 aaKnown RBP9.45□□□□□ -0.9
DDX39B-216ENST00000462421 CTHP32929 405 aa9.45□□□□□ -0.9
DDX39B-216ENST00000462421 ATP5C1P36542 298 aaKnown RBP9.45□□□□□ -0.9
DDX39B-216ENST00000462421 CXCL12P48061 93 aa9.45□□□□□ -0.9
DDX39B-216ENST00000462421 FMO5P49326 533 aa9.45□□□□□ -0.9
DDX39B-216ENST00000462421 MRE11P49959 708 aa9.45□□□□□ -0.9
DDX39B-216ENST00000462421 MFAP3P55082 362 aa9.45□□□□□ -0.9
DDX39B-216ENST00000462421 PON2Q15165 354 aa9.45□□□□□ -0.9
DDX39B-216ENST00000462421 E2F5Q15329 346 aa9.45□□□□□ -0.9
DDX39B-216ENST00000462421 ENOSF1Q7L5Y1 443 aa9.45□□□□□ -0.9
DDX39B-216ENST00000462421 ALYREFQ86V81 257 aaKnown RBP9.45□□□□□ -0.9
DDX39B-216ENST00000462421 KIAA1958Q8N8K9 716 aa9.45□□□□□ -0.9
DDX39B-216ENST00000462421 RNF139Q8WU17 664 aa9.45□□□□□ -0.9
DDX39B-216ENST00000462421 USP13Q92995 863 aaPredicted RBP9.45□□□□□ -0.9
DDX39B-216ENST00000462421 ACDQ96AP0 544 aa9.45□□□□□ -0.9
DDX39B-216ENST00000462421 OTUB2Q96DC9 234 aa9.45□□□□□ -0.9
DDX39B-216ENST00000462421 ZFYVE19Q96K21 471 aa9.45□□□□□ -0.9
DDX39B-216ENST00000462421 P2RY13Q9BPV8 354 aa9.45□□□□□ -0.9
DDX39B-216ENST00000462421 TRIM62Q9BVG3 475 aa9.45□□□□□ -0.9
DDX39B-216ENST00000462421 PDCL3Q9H2J4 239 aa9.45□□□□□ -0.9
DDX39B-216ENST00000462421 CLSTN2Q9H4D0 955 aa9.45□□□□□ -0.9
DDX39B-216ENST00000462421 FAM86C1Q9NVL1 165 aa9.45□□□□□ -0.9
DDX39B-216ENST00000462421 GTSE1Q9NYZ3 720 aa9.45□□□□□ -0.9
DDX39B-216ENST00000462421 GCNT4Q9P109 453 aa9.45□□□□□ -0.9
DDX39B-216ENST00000462421 CFAP97Q9P2B7 532 aa9.45□□□□□ -0.9
DDX39B-216ENST00000462421 DNMT3LQ9UJW3 386 aa9.45□□□□□ -0.9
DDX39B-216ENST00000462421 NAGPAQ9UK23 515 aa9.45□□□□□ -0.9
DDX39B-216ENST00000462421 GMEB2Q9UKD1 530 aa9.45□□□□□ -0.9
DDX39B-216ENST00000462421 CEP83Q9Y592 693 aa9.45□□□□□ -0.9
DDX39B-216ENST00000462421 MUC3AQ02505 3323 aa9.44□□□□□ -0.9
DDX39B-216ENST00000462421 C2orf78A6NCI8 922 aa9.44□□□□□ -0.9
DDX39B-216ENST00000462421 LEFTY2O00292 366 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms