RNA–Protein interactions for RNA: ENST00000462335.1

PKP4-208, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-208ENST00000462335 PBXIP1Q96AQ6 731 aa10.11□□□□□ -0.79
PKP4-208ENST00000462335 MYRFLQ96LU7 910 aa10.11□□□□□ -0.79
PKP4-208ENST00000462335 ZSWIM3Q96MP5 696 aa10.11□□□□□ -0.79
PKP4-208ENST00000462335 ASB16Q96NS5 453 aa10.11□□□□□ -0.79
PKP4-208ENST00000462335 NOX5Q96PH1 765 aa10.11□□□□□ -0.79
PKP4-208ENST00000462335 SPAG5Q96R06 1193 aa10.11□□□□□ -0.79
PKP4-208ENST00000462335 MED15Q96RN5 788 aa10.11□□□□□ -0.79
PKP4-208ENST00000462335 EPHX3Q9H6B9 360 aa10.11□□□□□ -0.79
PKP4-208ENST00000462335 TDP1Q9NUW8 608 aa10.11□□□□□ -0.79
PKP4-208ENST00000462335 NME7Q9Y5B8 376 aa10.11□□□□□ -0.79
PKP4-208ENST00000462335 ZNF638Q14966 1978 aaKnown RBP10.11□□□□□ -0.79
PKP4-208ENST00000462335 TMEM221A6NGB7 291 aa10.1□□□□□ -0.79
PKP4-208ENST00000462335 HEPACAM2A8MVW5 462 aa10.1□□□□□ -0.79
PKP4-208ENST00000462335 ANHXE9PGG2 379 aa10.1□□□□□ -0.79
PKP4-208ENST00000462335 M0QYV0 167 aa10.1□□□□□ -0.79
PKP4-208ENST00000462335 M0R296 226 aa10.1□□□□□ -0.79
PKP4-208ENST00000462335 F11P03951 625 aa10.1□□□□□ -0.79
PKP4-208ENST00000462335 SETSIPP0DME0 302 aa10.1□□□□□ -0.79
PKP4-208ENST00000462335 MBL2P11226 248 aaPredicted RBP10.1□□□□□ -0.79
PKP4-208ENST00000462335 PFKLP17858 780 aa10.1□□□□□ -0.79
PKP4-208ENST00000462335 GNA15P30679 374 aa10.1□□□□□ -0.79
PKP4-208ENST00000462335 VIPR2P41587 438 aa10.1□□□□□ -0.79
PKP4-208ENST00000462335 KPNA1P52294 538 aaPredicted RBP10.1□□□□□ -0.79
PKP4-208ENST00000462335 SLC5A3P53794 718 aa10.1□□□□□ -0.79
PKP4-208ENST00000462335 AMPD2Q01433 879 aa10.1□□□□□ -0.79
PKP4-208ENST00000462335 BST2Q10589 180 aaKnown RBP10.1□□□□□ -0.79
PKP4-208ENST00000462335 GRM2Q14416 872 aa10.1□□□□□ -0.79
PKP4-208ENST00000462335 NFKBIBQ15653 356 aa10.1□□□□□ -0.79
PKP4-208ENST00000462335 CNGA2Q16280 664 aa10.1□□□□□ -0.79
PKP4-208ENST00000462335 CDKAL1Q5VV42 579 aa10.1□□□□□ -0.79
PKP4-208ENST00000462335 ARHGAP17Q68EM7 881 aa10.1□□□□□ -0.79
PKP4-208ENST00000462335 TRIM67Q6ZTA4 783 aa10.1□□□□□ -0.79
PKP4-208ENST00000462335 MFSD6LQ8IWD5 586 aa10.1□□□□□ -0.79
PKP4-208ENST00000462335 FLCNQ8NFG4 579 aa10.1□□□□□ -0.79
PKP4-208ENST00000462335 SCAMP5Q8TAC9 235 aa10.1□□□□□ -0.79
PKP4-208ENST00000462335 LMO3Q8TAP4 145 aa10.1□□□□□ -0.79
PKP4-208ENST00000462335 BPIFB1Q8TDL5 484 aa10.1□□□□□ -0.79
PKP4-208ENST00000462335 WHAMMQ8TF30 809 aa10.1□□□□□ -0.79
PKP4-208ENST00000462335 RNF139Q8WU17 664 aa10.1□□□□□ -0.79
PKP4-208ENST00000462335 OVCA2Q8WZ82 227 aa10.1□□□□□ -0.79
PKP4-208ENST00000462335 FGF14Q92915 247 aa10.1□□□□□ -0.79
PKP4-208ENST00000462335 EXOC4Q96A65 974 aa10.1□□□□□ -0.79
PKP4-208ENST00000462335 CDK5RAP1Q96SZ6 601 aaKnown RBP10.1□□□□□ -0.79
PKP4-208ENST00000462335 SMOQ99835 787 aa10.1□□□□□ -0.79
PKP4-208ENST00000462335 SLC46A2Q9BY10 475 aa10.1□□□□□ -0.79
PKP4-208ENST00000462335 LRRC3Q9BY71 257 aa10.1□□□□□ -0.79
PKP4-208ENST00000462335 TSPY26PQ9H489 355 aa10.1□□□□□ -0.79
PKP4-208ENST00000462335 SYNCQ9H7C4 482 aa10.1□□□□□ -0.79
PKP4-208ENST00000462335 KIF9Q9HAQ2 790 aa10.1□□□□□ -0.79
PKP4-208ENST00000462335 ST7Q9NRC1 585 aa10.1□□□□□ -0.79
PKP4-208ENST00000462335 FAM207AQ9NSI2 230 aaPredicted RBP10.1□□□□□ -0.79
PKP4-208ENST00000462335 LIMA1Q9UHB6 759 aaKnown RBP10.1□□□□□ -0.79
PKP4-208ENST00000462335 NAGPAQ9UK23 515 aa10.1□□□□□ -0.79
PKP4-208ENST00000462335 TSPAN16Q9UKR8 245 aa10.1□□□□□ -0.79
PKP4-208ENST00000462335 CA14Q9ULX7 337 aa10.1□□□□□ -0.79
PKP4-208ENST00000462335 DUSP12Q9UNI6 340 aa10.1□□□□□ -0.79
PKP4-208ENST00000462335 C5orf42Q9H799 3197 aa10.09□□□□□ -0.79
PKP4-208ENST00000462335 ZNF840PA6NDX5 716 aa10.09□□□□□ -0.79
PKP4-208ENST00000462335 XPO1O14980 1071 aaKnown RBP10.09□□□□□ -0.79
PKP4-208ENST00000462335 CCDC172P0C7W6 258 aa10.09□□□□□ -0.79
PKP4-208ENST00000462335 LCP1P13796 627 aa10.09□□□□□ -0.79
PKP4-208ENST00000462335 BRD2P25440 801 aaKnown RBP10.09□□□□□ -0.79
PKP4-208ENST00000462335 ATP5C1P36542 298 aaKnown RBP10.09□□□□□ -0.79
PKP4-208ENST00000462335 IFNAR2P48551 515 aa10.09□□□□□ -0.79
PKP4-208ENST00000462335 PSEN1P49768 467 aa10.09□□□□□ -0.79
PKP4-208ENST00000462335 CACNA2D1P54289 1103 aa10.09□□□□□ -0.79
PKP4-208ENST00000462335 GPC5P78333 572 aa10.09□□□□□ -0.79
PKP4-208ENST00000462335 PLCB2Q00722 1185 aa10.09□□□□□ -0.79
PKP4-208ENST00000462335 NR1H3Q13133 447 aa10.09□□□□□ -0.79
PKP4-208ENST00000462335 ARHGAP29Q52LW3 1261 aa10.09□□□□□ -0.79
PKP4-208ENST00000462335 MIIPQ5JXC2 388 aa10.09□□□□□ -0.79
PKP4-208ENST00000462335 STXBP5Q5T5C0 1151 aa10.09□□□□□ -0.79
PKP4-208ENST00000462335 GJB7Q6PEY0 223 aa10.09□□□□□ -0.79
PKP4-208ENST00000462335 LCLAT1Q6UWP7 414 aa10.09□□□□□ -0.79
PKP4-208ENST00000462335 CLEC20AQ6ZU45 233 aa10.09□□□□□ -0.79
PKP4-208ENST00000462335 PAQR9Q6ZVX9 377 aa10.09□□□□□ -0.79
PKP4-208ENST00000462335 DDX42Q86XP3 938 aaKnown RBP eCLIP10.09□□□□□ -0.79
PKP4-208ENST00000462335 FMNL3Q8IVF7 1028 aa10.09□□□□□ -0.79
PKP4-208ENST00000462335 SIX5Q8N196 739 aa10.09□□□□□ -0.79
PKP4-208ENST00000462335 ARL14EPQ8N8R7 260 aaPredicted RBP10.09□□□□□ -0.79
PKP4-208ENST00000462335 KAT5Q92993 513 aa10.09□□□□□ -0.79
PKP4-208ENST00000462335 KREMEN1Q96MU8 473 aa10.09□□□□□ -0.79
PKP4-208ENST00000462335 CYP2S1Q96SQ9 504 aa10.09□□□□□ -0.79
PKP4-208ENST00000462335 TTLL2Q9BWV7 592 aa10.09□□□□□ -0.79
PKP4-208ENST00000462335 UBXN6Q9BZV1 441 aa10.09□□□□□ -0.79
PKP4-208ENST00000462335 IL21Q9HBE4 155 aa10.09□□□□□ -0.79
PKP4-208ENST00000462335 CSNK1G1Q9HCP0 422 aa10.09□□□□□ -0.79
PKP4-208ENST00000462335 PNPLA8Q9NP80 782 aa10.09□□□□□ -0.79
PKP4-208ENST00000462335 GMIPQ9P107 970 aa10.09□□□□□ -0.79
PKP4-208ENST00000462335 WNT16Q9UBV4 365 aa10.09□□□□□ -0.79
PKP4-208ENST00000462335 STRIP2Q9ULQ0 834 aa10.09□□□□□ -0.79
PKP4-208ENST00000462335 SCML2Q9UQR0 700 aa10.09□□□□□ -0.79
PKP4-208ENST00000462335 MRPS17Q9Y2R5 130 aaKnown RBP10.09□□□□□ -0.79
PKP4-208ENST00000462335 SH3BP1Q9Y3L3 701 aa10.09□□□□□ -0.79
PKP4-208ENST00000462335 FAM86C2PA6NEL3 165 aa10.08□□□□□ -0.8
PKP4-208ENST00000462335 LGALS16A8MUM7 142 aa10.08□□□□□ -0.8
PKP4-208ENST00000462335 SLC9A3R1O14745 358 aaPredicted RBP10.08□□□□□ -0.8
PKP4-208ENST00000462335 CYP26A1O43174 497 aa10.08□□□□□ -0.8
PKP4-208ENST00000462335 NARSO43776 548 aaKnown RBP10.08□□□□□ -0.8
PKP4-208ENST00000462335 MOSPD3O75425 235 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms