RNA–Protein interactions for RNA: ENST00000462254.1

CSMD3-205, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 2

Gene CSMD3, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-205ENST00000462254 SLC38A10Q9HBR0 1119 aa5.15□□□□□ -1.59
CSMD3-205ENST00000462254 RXFP1Q9HBX9 757 aa5.15□□□□□ -1.59
CSMD3-205ENST00000462254 RAVER2Q9HCJ3 691 aaKnown RBP5.15□□□□□ -1.59
CSMD3-205ENST00000462254 ALG13Q9NP73 1137 aaKnown RBP5.15□□□□□ -1.59
CSMD3-205ENST00000462254 TBC1D22BQ9NU19 505 aa5.15□□□□□ -1.59
CSMD3-205ENST00000462254 BLOC1S4Q9NUP1 217 aa5.15□□□□□ -1.59
CSMD3-205ENST00000462254 DNAJC28Q9NX36 388 aa5.15□□□□□ -1.59
CSMD3-205ENST00000462254 BTBD7Q9P203 1132 aa5.15□□□□□ -1.59
CSMD3-205ENST00000462254 KLHL14Q9P2G3 628 aa5.15□□□□□ -1.59
CSMD3-205ENST00000462254 FBXL7Q9UJT9 491 aa5.15□□□□□ -1.59
CSMD3-205ENST00000462254 CDC23Q9UJX2 597 aa5.15□□□□□ -1.59
CSMD3-205ENST00000462254 CNPY2Q9Y2B0 182 aa5.15□□□□□ -1.59
CSMD3-205ENST00000462254 TMEM98Q9Y2Y6 226 aa5.15□□□□□ -1.59
CSMD3-205ENST00000462254 TTLL3Q9Y4R7 772 aa5.15□□□□□ -1.59
CSMD3-205ENST00000462254 PCDHA1Q9Y5I3 950 aa5.15□□□□□ -1.59
CSMD3-205ENST00000462254 HCFC2Q9Y5Z7 792 aa5.15□□□□□ -1.59
CSMD3-205ENST00000462254 RHPN2P1A8MT19 583 aa5.14□□□□□ -1.59
CSMD3-205ENST00000462254 NFIBO00712 420 aa5.14□□□□□ -1.59
CSMD3-205ENST00000462254 ATP2A1O14983 1001 aa5.14□□□□□ -1.59
CSMD3-205ENST00000462254 EDIL3O43854 480 aa5.14□□□□□ -1.59
CSMD3-205ENST00000462254 KDM1AO60341 852 aa5.14□□□□□ -1.59
CSMD3-205ENST00000462254 NPHS1O60500 1241 aa5.14□□□□□ -1.59
CSMD3-205ENST00000462254 NDUFS2O75306 463 aa5.14□□□□□ -1.59
CSMD3-205ENST00000462254 FUCA1P04066 466 aa5.14□□□□□ -1.59
CSMD3-205ENST00000462254 CYP2C8P10632 490 aa5.14□□□□□ -1.59
CSMD3-205ENST00000462254 CETPP11597 493 aa5.14□□□□□ -1.59
CSMD3-205ENST00000462254 ALAS1P13196 640 aa5.14□□□□□ -1.59
CSMD3-205ENST00000462254 CALML3P27482 149 aa5.14□□□□□ -1.59
CSMD3-205ENST00000462254 TOB1P50616 345 aaPredicted RBP5.14□□□□□ -1.59
CSMD3-205ENST00000462254 FXR1P51114 621 aaKnown RBP eCLIP5.14□□□□□ -1.59
CSMD3-205ENST00000462254 ADCY7P51828 1080 aa5.14□□□□□ -1.59
CSMD3-205ENST00000462254 CORO7P57737 925 aa5.14□□□□□ -1.59
CSMD3-205ENST00000462254 HERVK_113P62684 666 aa5.14□□□□□ -1.59
CSMD3-205ENST00000462254 IRX3P78415 501 aaPredicted RBP5.14□□□□□ -1.59
CSMD3-205ENST00000462254 LACTBP83111 547 aaPredicted RBP5.14□□□□□ -1.59
CSMD3-205ENST00000462254 KCNAB2Q13303 367 aa5.14□□□□□ -1.59
CSMD3-205ENST00000462254 TMEM132BQ14DG7 1078 aa5.14□□□□□ -1.59
CSMD3-205ENST00000462254 POLD3Q15054 466 aaPredicted RBP5.14□□□□□ -1.59
CSMD3-205ENST00000462254 CNN3Q15417 329 aaKnown RBP5.14□□□□□ -1.59
CSMD3-205ENST00000462254 ZNF174Q15697 407 aa5.14□□□□□ -1.59
CSMD3-205ENST00000462254 PGS1Q32NB8 556 aa5.14□□□□□ -1.59
CSMD3-205ENST00000462254 GALNT17Q6IS24 598 aa5.14□□□□□ -1.59
CSMD3-205ENST00000462254 USP17L6PQ6QN14 398 aa5.14□□□□□ -1.59
CSMD3-205ENST00000462254 NPNTQ6UXI9 565 aa5.14□□□□□ -1.59
CSMD3-205ENST00000462254 RPTNQ6XPR3 784 aa5.14□□□□□ -1.59
CSMD3-205ENST00000462254 PIK3AP1Q6ZUJ8 805 aa5.14□□□□□ -1.59
CSMD3-205ENST00000462254 FASTKD5Q7L8L6 764 aaKnown RBP5.14□□□□□ -1.59
CSMD3-205ENST00000462254 TBC1D1Q86TI0 1168 aaPredicted RBP5.14□□□□□ -1.59
CSMD3-205ENST00000462254 TTC30BQ8N4P2 665 aa5.14□□□□□ -1.59
CSMD3-205ENST00000462254 CISD2Q8N5K1 135 aaKnown RBP5.14□□□□□ -1.59
CSMD3-205ENST00000462254 LZTR1Q8N653 840 aa5.14□□□□□ -1.59
CSMD3-205ENST00000462254 POU5F2Q8N7G0 328 aa5.14□□□□□ -1.59
CSMD3-205ENST00000462254 CLEC4DQ8WXI8 215 aa5.14□□□□□ -1.59
CSMD3-205ENST00000462254 HDAC2Q92769 488 aaKnown RBP5.14□□□□□ -1.59
CSMD3-205ENST00000462254 ZC3H10Q96K80 434 aaKnown RBP5.14□□□□□ -1.59
CSMD3-205ENST00000462254 PTPN18Q99952 460 aa5.14□□□□□ -1.59
CSMD3-205ENST00000462254 LRRC27Q9C0I9 530 aa5.14□□□□□ -1.59
CSMD3-205ENST00000462254 MCOLN1Q9GZU1 580 aa5.14□□□□□ -1.59
CSMD3-205ENST00000462254 R3HDMLQ9H3Y0 253 aa5.14□□□□□ -1.59
CSMD3-205ENST00000462254 C6orf50Q9HD87 102 aa5.14□□□□□ -1.59
CSMD3-205ENST00000462254 TXNRD2Q9NNW7 524 aa5.14□□□□□ -1.59
CSMD3-205ENST00000462254 STARD7Q9NQZ5 370 aa5.14□□□□□ -1.59
CSMD3-205ENST00000462254 CCPG1Q9ULG6 757 aa5.14□□□□□ -1.59
CSMD3-205ENST00000462254 ABT1Q9ULW3 272 aaKnown RBP5.14□□□□□ -1.59
CSMD3-205ENST00000462254 PCDHA6Q9UN73 950 aa5.14□□□□□ -1.59
CSMD3-205ENST00000462254 CRYL1Q9Y2S2 319 aa5.14□□□□□ -1.59
CSMD3-205ENST00000462254 RIPK3Q9Y572 518 aa5.14□□□□□ -1.59
CSMD3-205ENST00000462254 ABCB11O95342 1321 aa5.14□□□□□ -1.59
CSMD3-205ENST00000462254 ADGRA2Q96PE1 1338 aa5.14□□□□□ -1.59
CSMD3-205ENST00000462254 KAT6AQ92794 2004 aa5.14□□□□□ -1.59
CSMD3-205ENST00000462254 A0A1W2PQJ5 194 aa5.13□□□□□ -1.59
CSMD3-205ENST00000462254 MANSC4A6NHS7 340 aaPredicted RBP5.13□□□□□ -1.59
CSMD3-205ENST00000462254 RRN3P2A6NIE6 340 aa5.13□□□□□ -1.59
CSMD3-205ENST00000462254 FAM47E-STBD1D6RA91 191 aa5.13□□□□□ -1.59
CSMD3-205ENST00000462254 PDHXO00330 501 aa5.13□□□□□ -1.59
CSMD3-205ENST00000462254 ZBED4O75132 1171 aa5.13□□□□□ -1.59
CSMD3-205ENST00000462254 FARP2O94887 1054 aaPredicted RBP5.13□□□□□ -1.59
CSMD3-205ENST00000462254 CD4P01730 458 aa5.13□□□□□ -1.59
CSMD3-205ENST00000462254 CSTBP04080 98 aaKnown RBP5.13□□□□□ -1.59
CSMD3-205ENST00000462254 MPOP05164 745 aa5.13□□□□□ -1.59
CSMD3-205ENST00000462254 DBHP09172 617 aa5.13□□□□□ -1.59
CSMD3-205ENST00000462254 DHRS4L1P0CG22 281 aa5.13□□□□□ -1.59
CSMD3-205ENST00000462254 GLI4P10075 376 aa5.13□□□□□ -1.59
CSMD3-205ENST00000462254 RPL17P18621 184 aaKnown RBP5.13□□□□□ -1.59
CSMD3-205ENST00000462254 GNA11P29992 359 aa5.13□□□□□ -1.59
CSMD3-205ENST00000462254 HOXA13P31271 388 aaPredicted RBP5.13□□□□□ -1.59
CSMD3-205ENST00000462254 VIPR1P32241 457 aa5.13□□□□□ -1.59
CSMD3-205ENST00000462254 BCL6P41182 706 aa5.13□□□□□ -1.59
CSMD3-205ENST00000462254 TECP42680 631 aa5.13□□□□□ -1.59
CSMD3-205ENST00000462254 HSD17B4P51659 736 aa5.13□□□□□ -1.59
CSMD3-205ENST00000462254 OAZ1P54368 228 aa5.13□□□□□ -1.59
CSMD3-205ENST00000462254 YBX1P67809 324 aaKnown RBP5.13□□□□□ -1.59
CSMD3-205ENST00000462254 APBA1Q02410 837 aa5.13□□□□□ -1.59
CSMD3-205ENST00000462254 GHRHRQ02643 423 aa5.13□□□□□ -1.59
CSMD3-205ENST00000462254 CEBPZQ03701 1054 aaKnown RBP5.13□□□□□ -1.59
CSMD3-205ENST00000462254 PTPAQ15257 358 aa5.13□□□□□ -1.59
CSMD3-205ENST00000462254 CRY1Q16526 586 aa5.13□□□□□ -1.59
CSMD3-205ENST00000462254 FSCN1Q16658 493 aaKnown RBP5.13□□□□□ -1.59
CSMD3-205ENST00000462254 FKBP15Q5T1M5 1219 aa5.13□□□□□ -1.59
CSMD3-205ENST00000462254 SPATA1Q5VX52 437 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms