RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 TBC1D14Q9P2M4 693 aa9.41□□□□□ -0.9
LDB1-203ENST00000461873 ARHGAP26Q9UNA1 814 aa9.41□□□□□ -0.9
LDB1-203ENST00000461873 TRAF3IP3Q9Y228 551 aa9.41□□□□□ -0.9
LDB1-203ENST00000461873 WNT6Q9Y6F9 365 aa9.41□□□□□ -0.9
LDB1-203ENST00000461873 F5P12259 2224 aa9.41□□□□□ -0.9
LDB1-203ENST00000461873 ZFHX2Q9C0A1 2572 aaPredicted RBP9.41□□□□□ -0.9
LDB1-203ENST00000461873 ZNF840PA6NDX5 716 aa9.4□□□□□ -0.9
LDB1-203ENST00000461873 PRR5-ARHGAP8B1AHC4 643 aa9.4□□□□□ -0.9
LDB1-203ENST00000461873 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.4□□□□□ -0.9
LDB1-203ENST00000461873 CHURC1-FNTBB4DL54 471 aa9.4□□□□□ -0.9
LDB1-203ENST00000461873 LEFTY2O00292 366 aa9.4□□□□□ -0.9
LDB1-203ENST00000461873 CLDN5O00501 218 aa9.4□□□□□ -0.9
LDB1-203ENST00000461873 TRDMT1O14717 391 aaKnown RBP9.4□□□□□ -0.9
LDB1-203ENST00000461873 RNF40O75150 1001 aa9.4□□□□□ -0.9
LDB1-203ENST00000461873 HLA-DRAP01903 254 aa9.4□□□□□ -0.9
LDB1-203ENST00000461873 ARSAP15289 507 aa9.4□□□□□ -0.9
LDB1-203ENST00000461873 CD58P19256 250 aa9.4□□□□□ -0.9
LDB1-203ENST00000461873 ADORA2BP29275 332 aa9.4□□□□□ -0.9
LDB1-203ENST00000461873 GTF2H1P32780 548 aa9.4□□□□□ -0.9
LDB1-203ENST00000461873 GJA4P35212 333 aa9.4□□□□□ -0.9
LDB1-203ENST00000461873 PPP1R2P41236 205 aa9.4□□□□□ -0.9
LDB1-203ENST00000461873 GCLMP48507 274 aa9.4□□□□□ -0.9
LDB1-203ENST00000461873 FNTBP49356 437 aa9.4□□□□□ -0.9
LDB1-203ENST00000461873 GALK1P51570 392 aa9.4□□□□□ -0.9
LDB1-203ENST00000461873 NDST1P52848 882 aa9.4□□□□□ -0.9
LDB1-203ENST00000461873 ARHGAP8P85298 464 aa9.4□□□□□ -0.9
LDB1-203ENST00000461873 LMNB2Q03252 620 aa9.4□□□□□ -0.9
LDB1-203ENST00000461873 DPYDQ12882 1025 aa9.4□□□□□ -0.9
LDB1-203ENST00000461873 FZD5Q13467 585 aa9.4□□□□□ -0.9
LDB1-203ENST00000461873 ZNF77Q15935 545 aa9.4□□□□□ -0.9
LDB1-203ENST00000461873 LPAL2Q16609 132 aa9.4□□□□□ -0.9
LDB1-203ENST00000461873 ZACNQ401N2 412 aa9.4□□□□□ -0.9
LDB1-203ENST00000461873 DCAF17Q5H9S7 520 aaPredicted RBP9.4□□□□□ -0.9
LDB1-203ENST00000461873 KRT39Q6A163 491 aa9.4□□□□□ -0.9
LDB1-203ENST00000461873 LAIR1Q6GTX8 287 aa9.4□□□□□ -0.9
LDB1-203ENST00000461873 TXNDC11Q6PKC3 985 aa9.4□□□□□ -0.9
LDB1-203ENST00000461873 SV2AQ7L0J3 742 aa9.4□□□□□ -0.9
LDB1-203ENST00000461873 ERMP1Q7Z2K6 904 aa9.4□□□□□ -0.9
LDB1-203ENST00000461873 DGLUCYQ7Z3D6 616 aa9.4□□□□□ -0.9
LDB1-203ENST00000461873 LIMS2Q7Z4I7 341 aa9.4□□□□□ -0.9
LDB1-203ENST00000461873 FAM35AQ86V20 835 aa9.4□□□□□ -0.9
LDB1-203ENST00000461873 TTC30AQ86WT1 665 aa9.4□□□□□ -0.9
LDB1-203ENST00000461873 TMEM174Q8WUU8 243 aa9.4□□□□□ -0.9
LDB1-203ENST00000461873 LRRC3BQ96PB8 259 aa9.4□□□□□ -0.9
LDB1-203ENST00000461873 B3GNT5Q9BYG0 378 aa9.4□□□□□ -0.9
LDB1-203ENST00000461873 CYP3A43Q9HB55 503 aa9.4□□□□□ -0.9
LDB1-203ENST00000461873 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.4□□□□□ -0.91e-24■■■■■ 211.2
LDB1-203ENST00000461873 KRT82Q9NSB4 513 aa9.4□□□□□ -0.9
LDB1-203ENST00000461873 DMAC2Q9NW81 257 aa9.4□□□□□ -0.9
LDB1-203ENST00000461873 LSM7Q9UK45 103 aaKnown RBP9.4□□□□□ -0.9
LDB1-203ENST00000461873 CDV3Q9UKY7 258 aaKnown RBP9.4□□□□□ -0.9
LDB1-203ENST00000461873 CPQQ9Y646 472 aa9.4□□□□□ -0.9
LDB1-203ENST00000461873 VPS13AQ96RL7 3174 aa9.4□□□□□ -0.91
LDB1-203ENST00000461873 FANCMQ8IYD8 2048 aa9.39□□□□□ -0.91
LDB1-203ENST00000461873 COL4A3Q01955 1670 aa9.39□□□□□ -0.91
LDB1-203ENST00000461873 NCANO14594 1321 aa9.39□□□□□ -0.91
LDB1-203ENST00000461873 OBSL1O75147 1896 aa9.39□□□□□ -0.91
LDB1-203ENST00000461873 PSMA7O14818 248 aa9.39□□□□□ -0.91
LDB1-203ENST00000461873 LILRB5O75023 590 aa9.39□□□□□ -0.91
LDB1-203ENST00000461873 ALDH1A2O94788 518 aa9.39□□□□□ -0.91
LDB1-203ENST00000461873 APODP05090 189 aa9.39□□□□□ -0.91
LDB1-203ENST00000461873 RALAP11233 206 aa9.39□□□□□ -0.91
LDB1-203ENST00000461873 SLC5A3P53794 718 aa9.39□□□□□ -0.91
LDB1-203ENST00000461873 MAP3K7CLP57077 242 aa9.39□□□□□ -0.91
LDB1-203ENST00000461873 YWHAEP62258 255 aaKnown RBP9.39□□□□□ -0.91
LDB1-203ENST00000461873 DLG4P78352 724 aa9.39□□□□□ -0.91
LDB1-203ENST00000461873 CLDN10P78369 228 aa9.39□□□□□ -0.91
LDB1-203ENST00000461873 SLC7A9P82251 487 aa9.39□□□□□ -0.91
LDB1-203ENST00000461873 ENPEPQ07075 957 aa9.39□□□□□ -0.91
LDB1-203ENST00000461873 USP4Q13107 963 aa9.39□□□□□ -0.91
LDB1-203ENST00000461873 CCINQ13939 588 aa9.39□□□□□ -0.91
LDB1-203ENST00000461873 PUM1Q14671 1186 aaKnown RBP eCLIP9.39□□□□□ -0.915e-6■□□□□ 10.2
LDB1-203ENST00000461873 NFIL3Q16649 462 aa9.39□□□□□ -0.91
LDB1-203ENST00000461873 CCDC142Q17RM4 750 aa9.39□□□□□ -0.91
LDB1-203ENST00000461873 EDRF1Q3B7T1 1238 aa9.39□□□□□ -0.91
LDB1-203ENST00000461873 TMEM196Q5HYL7 178 aa9.39□□□□□ -0.91
LDB1-203ENST00000461873 SCARA3Q6AZY7 606 aa9.39□□□□□ -0.91
LDB1-203ENST00000461873 Q6ZS52 159 aa9.39□□□□□ -0.91
LDB1-203ENST00000461873 CACNA2D4Q7Z3S7 1137 aa9.39□□□□□ -0.91
LDB1-203ENST00000461873 FILIP1Q7Z7B0 1213 aa9.39□□□□□ -0.91
LDB1-203ENST00000461873 DCLK2Q8N568 766 aa9.39□□□□□ -0.91
LDB1-203ENST00000461873 CAMKK1Q8N5S9 505 aa9.39□□□□□ -0.91
LDB1-203ENST00000461873 C12orf50Q8NA57 414 aaPredicted RBP9.39□□□□□ -0.91
LDB1-203ENST00000461873 SUMF1Q8NBK3 374 aa9.39□□□□□ -0.91
LDB1-203ENST00000461873 RPLP0P6Q8NHW5 317 aa9.39□□□□□ -0.91
LDB1-203ENST00000461873 SLC2A14Q8TDB8 520 aa9.39□□□□□ -0.91
LDB1-203ENST00000461873 JAKMIP2Q96AA8 810 aa9.39□□□□□ -0.91
LDB1-203ENST00000461873 CYFIP2Q96F07 1278 aa9.39□□□□□ -0.91
LDB1-203ENST00000461873 HEXIM2Q96MH2 286 aaKnown RBP9.39□□□□□ -0.91
LDB1-203ENST00000461873 GSDMAQ96QA5 445 aa9.39□□□□□ -0.91
LDB1-203ENST00000461873 TTLL2Q9BWV7 592 aa9.39□□□□□ -0.91
LDB1-203ENST00000461873 NIF3L1Q9GZT8 377 aa9.39□□□□□ -0.91
LDB1-203ENST00000461873 XYLT2Q9H1B5 865 aa9.39□□□□□ -0.91
LDB1-203ENST00000461873 TMEM8AQ9HCN3 771 aa9.39□□□□□ -0.91
LDB1-203ENST00000461873 HPS4Q9NQG7 708 aa9.39□□□□□ -0.91
LDB1-203ENST00000461873 FAM49BQ9NUQ9 324 aa9.39□□□□□ -0.91
LDB1-203ENST00000461873 GCNT4Q9P109 453 aa9.39□□□□□ -0.91
LDB1-203ENST00000461873 CFAP97Q9P2B7 532 aa9.39□□□□□ -0.91
LDB1-203ENST00000461873 CHORDC1Q9UHD1 332 aaPredicted RBP9.39□□□□□ -0.91
LDB1-203ENST00000461873 CIZ1Q9ULV3 898 aaPredicted RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms