RNA–Protein interactions for RNA: ENST00000461849.1

RBM39-222, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 861 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-222ENST00000461849 TDP1Q9NUW8 608 aa14.7□□□□□ -0.06
RBM39-222ENST00000461849 CFAP54Q96N23 3096 aa14.69□□□□□ -0.06
RBM39-222ENST00000461849 TRAV19A0A0A6YYK7 116 aa14.69□□□□□ -0.06
RBM39-222ENST00000461849 SHISA7A6NL88 538 aa14.69□□□□□ -0.06
RBM39-222ENST00000461849 AFPP02771 609 aaKnown RBP14.69□□□□□ -0.06
RBM39-222ENST00000461849 C4BPAP04003 597 aaKnown RBP14.69□□□□□ -0.06
RBM39-222ENST00000461849 CKMP06732 381 aa14.69□□□□□ -0.06
RBM39-222ENST00000461849 TPM2P07951 284 aa14.69□□□□□ -0.06
RBM39-222ENST00000461849 P4HA1P13674 534 aa14.69□□□□□ -0.06
RBM39-222ENST00000461849 CDK11BP21127 795 aaKnown RBP14.69□□□□□ -0.06
RBM39-222ENST00000461849 SOX9P48436 509 aa14.69□□□□□ -0.06
RBM39-222ENST00000461849 PDE6CP51160 858 aa14.69□□□□□ -0.06
RBM39-222ENST00000461849 CCR3P51677 355 aa14.69□□□□□ -0.06
RBM39-222ENST00000461849 AMPD2Q01433 879 aa14.69□□□□□ -0.06
RBM39-222ENST00000461849 FZD5Q13467 585 aa14.69□□□□□ -0.06
RBM39-222ENST00000461849 NCOA4Q13772 614 aa14.69□□□□□ -0.06
RBM39-222ENST00000461849 ITPRIPL2Q3MIP1 535 aa14.69□□□□□ -0.06
RBM39-222ENST00000461849 HSP90AA4PQ58FG1 418 aa14.69□□□□□ -0.06
RBM39-222ENST00000461849 ZNF667Q5HYK9 610 aa14.69□□□□□ -0.06
RBM39-222ENST00000461849 TCERG1LQ5VWI1 586 aa14.69□□□□□ -0.06
RBM39-222ENST00000461849 TDRD10Q5VZ19 366 aaKnown RBP14.69□□□□□ -0.06
RBM39-222ENST00000461849 KRT39Q6A163 491 aa14.69□□□□□ -0.06
RBM39-222ENST00000461849 SV2AQ7L0J3 742 aa14.69□□□□□ -0.06
RBM39-222ENST00000461849 APTXQ7Z2E3 356 aaKnown RBP14.69□□□□□ -0.06
RBM39-222ENST00000461849 TTC16Q8NEE8 873 aa14.69□□□□□ -0.06
RBM39-222ENST00000461849 USP13Q92995 863 aaPredicted RBP14.69□□□□□ -0.06
RBM39-222ENST00000461849 SPATA17Q96L03 361 aa14.69□□□□□ -0.06
RBM39-222ENST00000461849 CEP295NLQ96MC4 621 aa14.69□□□□□ -0.06
RBM39-222ENST00000461849 CHRDQ9H2X0 955 aa14.69□□□□□ -0.06
RBM39-222ENST00000461849 GTPBP10A4D1E9 387 aaKnown RBP14.68□□□□□ -0.06
RBM39-222ENST00000461849 USP17L7P0C7H9 530 aa14.68□□□□□ -0.06
RBM39-222ENST00000461849 CHRNB1P11230 501 aa14.68□□□□□ -0.06
RBM39-222ENST00000461849 ATP1A3P13637 1013 aa14.68□□□□□ -0.06
RBM39-222ENST00000461849 PTPN1P18031 435 aaKnown RBP14.68□□□□□ -0.06
RBM39-222ENST00000461849 CTHP32929 405 aa14.68□□□□□ -0.06
RBM39-222ENST00000461849 GCLMP48507 274 aa14.68□□□□□ -0.06
RBM39-222ENST00000461849 FMO5P49326 533 aa14.68□□□□□ -0.06
RBM39-222ENST00000461849 MXI1P50539 228 aa14.68□□□□□ -0.06
RBM39-222ENST00000461849 NRLP54845 237 aa14.68□□□□□ -0.06
RBM39-222ENST00000461849 TNK2Q07912 1038 aa14.68□□□□□ -0.06
RBM39-222ENST00000461849 KCNH2Q12809 1159 aa14.68□□□□□ -0.06
RBM39-222ENST00000461849 ZNF268Q14587 947 aaPredicted RBP14.68□□□□□ -0.06
RBM39-222ENST00000461849 VWA3BQ502W6 1294 aa14.68□□□□□ -0.06
RBM39-222ENST00000461849 MIIPQ5JXC2 388 aa14.68□□□□□ -0.06
RBM39-222ENST00000461849 DGKKQ5KSL6 1271 aa14.68□□□□□ -0.06
RBM39-222ENST00000461849 TSSK4Q6SA08 328 aa14.68□□□□□ -0.06
RBM39-222ENST00000461849 RNF214Q8ND24 703 aa14.68□□□□□ -0.06
RBM39-222ENST00000461849 ELOVL4Q9GZR5 314 aa14.68□□□□□ -0.06
RBM39-222ENST00000461849 RBSNQ9H1K0 784 aa14.68□□□□□ -0.06
RBM39-222ENST00000461849 NDST4Q9H3R1 872 aa14.68□□□□□ -0.06
RBM39-222ENST00000461849 VRTNQ9H8Y1 702 aa14.68□□□□□ -0.06
RBM39-222ENST00000461849 GKN1Q9NS71 199 aa14.68□□□□□ -0.06
RBM39-222ENST00000461849 ZSCAN32Q9NX65 697 aa14.68□□□□□ -0.06
RBM39-222ENST00000461849 TRPM5Q9NZQ8 1165 aa14.68□□□□□ -0.06
RBM39-222ENST00000461849 CCL26Q9Y258 94 aa14.68□□□□□ -0.06
RBM39-222ENST00000461849 COQ4Q9Y3A0 265 aa14.68□□□□□ -0.06
RBM39-222ENST00000461849 PCDHGA2Q9Y5H1 932 aa14.68□□□□□ -0.06
RBM39-222ENST00000461849 COL4A2P08572 1712 aa14.68□□□□□ -0.06
RBM39-222ENST00000461849 PATJQ8NI35 1801 aa14.68□□□□□ -0.06
RBM39-222ENST00000461849 TADA3O75528 432 aa14.67□□□□□ -0.06
RBM39-222ENST00000461849 TRIM21P19474 475 aaKnown RBP14.67□□□□□ -0.06
RBM39-222ENST00000461849 COPB1P53618 953 aaKnown RBP14.67□□□□□ -0.06
RBM39-222ENST00000461849 CETN1Q12798 172 aa14.67□□□□□ -0.06
RBM39-222ENST00000461849 RUNX3Q13761 415 aa14.67□□□□□ -0.06
RBM39-222ENST00000461849 PON2Q15165 354 aa14.67□□□□□ -0.06
RBM39-222ENST00000461849 SGSM1Q2NKQ1 1148 aa14.67□□□□□ -0.06
RBM39-222ENST00000461849 SCARA5Q6ZMJ2 495 aa14.67□□□□□ -0.06
RBM39-222ENST00000461849 CREBRFQ8IUR6 639 aa14.67□□□□□ -0.06
RBM39-222ENST00000461849 ZNF687Q8N1G0 1237 aa14.67□□□□□ -0.06
RBM39-222ENST00000461849 B3GALNT2Q8NCR0 500 aa14.67□□□□□ -0.06
RBM39-222ENST00000461849 EXOC4Q96A65 974 aa14.67□□□□□ -0.06
RBM39-222ENST00000461849 TNIP3Q96KP6 325 aa14.67□□□□□ -0.06
RBM39-222ENST00000461849 MED10Q9BTT4 135 aa14.67□□□□□ -0.06
RBM39-222ENST00000461849 FAM126AQ9BYI3 521 aaPredicted RBP14.67□□□□□ -0.06
RBM39-222ENST00000461849 XYLT2Q9H1B5 865 aa14.67□□□□□ -0.06
RBM39-222ENST00000461849 DPEP3Q9H4B8 488 aa14.67□□□□□ -0.06
RBM39-222ENST00000461849 EBF3Q9H4W6 596 aa14.67□□□□□ -0.06
RBM39-222ENST00000461849 PRMT8Q9NR22 394 aaPredicted RBP14.67□□□□□ -0.06
RBM39-222ENST00000461849 TAB2Q9NYJ8 693 aa14.67□□□□□ -0.06
RBM39-222ENST00000461849 CACNA1IQ9P0X4 2223 aa14.67□□□□□ -0.06
RBM39-222ENST00000461849 ZNF638Q14966 1978 aaKnown RBP14.67□□□□□ -0.06
RBM39-222ENST00000461849 ATP8B3O60423 1300 aa14.66□□□□□ -0.06
RBM39-222ENST00000461849 LGALS16A8MUM7 142 aa14.66□□□□□ -0.06
RBM39-222ENST00000461849 F8VP50 259 aa14.66□□□□□ -0.06
RBM39-222ENST00000461849 ABL1P00519 1130 aa14.66□□□□□ -0.06
RBM39-222ENST00000461849 HDCP19113 662 aa14.66□□□□□ -0.06
RBM39-222ENST00000461849 CXCL12P48061 93 aa14.66□□□□□ -0.06
RBM39-222ENST00000461849 PPP3CCP48454 512 aa14.66□□□□□ -0.06
RBM39-222ENST00000461849 CDH8P55286 799 aa14.66□□□□□ -0.06
RBM39-222ENST00000461849 IFRD2Q12894 506 aaPredicted RBP14.66□□□□□ -0.06
RBM39-222ENST00000461849 MTF1Q14872 753 aa14.66□□□□□ -0.06
RBM39-222ENST00000461849 PDGFRLQ15198 375 aa14.66□□□□□ -0.06
RBM39-222ENST00000461849 CBWD6Q4V339 395 aa14.66□□□□□ -0.06
RBM39-222ENST00000461849 CBWD3Q5JTY5 395 aa14.66□□□□□ -0.06
RBM39-222ENST00000461849 CBWD5Q5RIA9 395 aa14.66□□□□□ -0.06
RBM39-222ENST00000461849 TRIM68Q6AZZ1 485 aa14.66□□□□□ -0.06
RBM39-222ENST00000461849 TXNDC11Q6PKC3 985 aa14.66□□□□□ -0.06
RBM39-222ENST00000461849 MAMSTRQ6ZN01 415 aa14.66□□□□□ -0.06
RBM39-222ENST00000461849 ARL14EPQ8N8R7 260 aaPredicted RBP14.66□□□□□ -0.06
RBM39-222ENST00000461849 FBXL13Q8NEE6 735 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms