RNA–Protein interactions for RNA: ENST00000461660.1

ATP13A3-206, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,517 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-206ENST00000461660 FAM26DQ5JW98 314 aa4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 CCSAPQ6IQ19 270 aaPredicted RBP4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 DARS2Q6PI48 645 aaKnown RBP4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 FAM43BQ6ZT52 329 aaPredicted RBP4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 XYLT1Q86Y38 959 aa4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 JAMLQ86YT9 394 aa4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 NPAS4Q8IUM7 802 aa4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 GSPT2Q8IYD1 628 aaKnown RBP4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 TMEM130Q8N3G9 435 aa4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 TMEM199Q8N511 208 aa4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 UBR7Q8N806 425 aa4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 TTC16Q8NEE8 873 aa4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 JOSD2Q8TAC2 188 aa4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 SLC7A14Q8TBB6 771 aa4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 FNIP1Q8TF40 1166 aa4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 RSPH1Q8WYR4 309 aa4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 P3H4Q92791 437 aa4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 PNKPQ96T60 521 aa4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 YME1L1Q96TA2 773 aa4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 FMO2Q99518 471 aa4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 SEPT5Q99719 369 aaPredicted RBP4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 HNRNPABQ99729 332 aaKnown RBP4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 CCDC77Q9BR77 488 aa4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 DUSP16Q9BY84 665 aa4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 ULBP1Q9BZM6 244 aa4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 C11orf49Q9H6J7 331 aa4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 AAASQ9NRG9 546 aa4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 RGS18Q9NS28 235 aa4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 TBC1D13Q9NVG8 400 aa4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 USP18Q9UMW8 372 aa4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 NENFQ9UMX5 172 aa4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 PCDHB5Q9Y5E4 795 aa4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 ZNF236Q9UL36 1845 aa4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 C9IYK1 514 aa4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 M0QYT0 321 aa4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 DDX3YO15523 660 aaKnown RBP4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 MGEA5O60502 916 aa4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 CST8O60676 142 aa4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 EFCAB14O75071 495 aa4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 ATP2C2O75185 946 aa4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 ZBED1O96006 694 aa4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 CLTBP09497 229 aa4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 ZFXP17010 805 aaPredicted RBP4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 TYMPP19971 482 aa4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 MIPP30301 263 aa4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 MCCD1P59942 119 aaPredicted RBP4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 VEPH1Q14D04 833 aa4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 TRIP13Q15645 432 aaPredicted RBP4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 GLIPR1L2Q4G1C9 344 aa4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 TFDP3Q5H9I0 405 aa4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 INTS6LQ5JSJ4 861 aaKnown RBP4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 KCNT1Q5JUK3 1230 aa4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 PMF1Q6P1K2 205 aa4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 WDR93Q6P2C0 686 aa4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 SPOCD1Q6ZMY3 1216 aa4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 SYDE1Q6ZW31 735 aaPredicted RBP4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 BZW1Q7L1Q6 419 aaKnown RBP4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 OSTM1Q86WC4 334 aa4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 FAM126BQ8IXS8 530 aa4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 ATL2Q8NHH9 583 aa4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 MYCBPAPQ8TBZ2 947 aa4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 SPATA18Q8TC71 538 aa4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 ZBTB9Q96C00 473 aa4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 TBCBQ99426 244 aa4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 LBHD1Q9BQE6 289 aaPredicted RBP4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 TRIM51Q9BSJ1 452 aa4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 CYLDQ9NQC7 956 aa4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 DDIT4Q9NX09 232 aa4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 BCCIPQ9P287 314 aaKnown RBP eCLIP4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 SLC12A6Q9UHW9 1150 aa4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 DMGDHQ9UI17 866 aaKnown RBP4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 PCDHB8Q9UN66 801 aa4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 HEY1Q9Y5J3 304 aa4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 PLXNA1Q9UIW2 1896 aa4.31□□□□□ -1.72
ATP13A3-206ENST00000461660 UTRNP46939 3433 aa4.3□□□□□ -1.72
ATP13A3-206ENST00000461660 MYBPHLA2RUH7 354 aa4.3□□□□□ -1.72
ATP13A3-206ENST00000461660 CARNS1A5YM72 827 aa4.3□□□□□ -1.72
ATP13A3-206ENST00000461660 OR6C75A6NL08 312 aa4.3□□□□□ -1.72
ATP13A3-206ENST00000461660 APOL1O14791 398 aa4.3□□□□□ -1.72
ATP13A3-206ENST00000461660 URODP06132 367 aa4.3□□□□□ -1.72
ATP13A3-206ENST00000461660 MYZAPP0CAP1 466 aa4.3□□□□□ -1.72
ATP13A3-206ENST00000461660 KRT10P13645 584 aa4.3□□□□□ -1.72
ATP13A3-206ENST00000461660 H2AFXP16104 143 aaPredicted RBP4.3□□□□□ -1.72
ATP13A3-206ENST00000461660 COILP38432 576 aaPredicted RBP4.3□□□□□ -1.72
ATP13A3-206ENST00000461660 KCNJ1P48048 391 aa4.3□□□□□ -1.72
ATP13A3-206ENST00000461660 TAS2R40P59535 323 aa4.3□□□□□ -1.72
ATP13A3-206ENST00000461660 RPL10AP62906 217 aaKnown RBP4.3□□□□□ -1.72
ATP13A3-206ENST00000461660 KRT17Q04695 432 aa4.3□□□□□ -1.72
ATP13A3-206ENST00000461660 DSC3Q14574 896 aa4.3□□□□□ -1.72
ATP13A3-206ENST00000461660 CASP8Q14790 479 aa4.3□□□□□ -1.72
ATP13A3-206ENST00000461660 SLC39A12Q504Y0 691 aa4.3□□□□□ -1.72
ATP13A3-206ENST00000461660 XKR4Q5GH76 650 aa4.3□□□□□ -1.72
ATP13A3-206ENST00000461660 DENND2CQ68D51 928 aa4.3□□□□□ -1.72
ATP13A3-206ENST00000461660 MFSD7Q6UXD7 560 aa4.3□□□□□ -1.72
ATP13A3-206ENST00000461660 ALKAL1Q6UXT8 129 aa4.3□□□□□ -1.72
ATP13A3-206ENST00000461660 CCNI2Q6ZMN8 369 aaPredicted RBP4.3□□□□□ -1.72
ATP13A3-206ENST00000461660 SLC26A9Q7LBE3 791 aa4.3□□□□□ -1.72
ATP13A3-206ENST00000461660 POLNQ7Z5Q5 900 aa4.3□□□□□ -1.72
ATP13A3-206ENST00000461660 TTC30AQ86WT1 665 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms