RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 LUC7L2Q9Y383 392 aaKnown RBP11.91□□□□□ -0.5
SSBP1-202ENST00000461433 FAM92AA1XBS5 289 aa11.91□□□□□ -0.5
SSBP1-202ENST00000461433 MOSPD3O75425 235 aa11.91□□□□□ -0.5
SSBP1-202ENST00000461433 F11P03951 625 aa11.91□□□□□ -0.5
SSBP1-202ENST00000461433 SETSIPP0DME0 302 aa11.91□□□□□ -0.5
SSBP1-202ENST00000461433 PRKCIP41743 596 aa11.91□□□□□ -0.5
SSBP1-202ENST00000461433 PDE6CP51160 858 aa11.91□□□□□ -0.5
SSBP1-202ENST00000461433 SLC5A3P53794 718 aa11.91□□□□□ -0.5
SSBP1-202ENST00000461433 FMO1Q01740 532 aa11.91□□□□□ -0.5
SSBP1-202ENST00000461433 CDR2Q01850 454 aa11.91□□□□□ -0.5
SSBP1-202ENST00000461433 GOLGA8FQ08AF8 430 aa11.91□□□□□ -0.5
SSBP1-202ENST00000461433 GOLGA8DPQ0D2H9 430 aa11.91□□□□□ -0.5
SSBP1-202ENST00000461433 TRIM14Q14142 442 aa11.91□□□□□ -0.5
SSBP1-202ENST00000461433 CBX2Q14781 532 aaPredicted RBP11.91□□□□□ -0.5
SSBP1-202ENST00000461433 VEPH1Q14D04 833 aa11.91□□□□□ -0.5
SSBP1-202ENST00000461433 TAF3Q5VWG9 929 aa11.91□□□□□ -0.5
SSBP1-202ENST00000461433 HGSNATQ68CP4 663 aa11.91□□□□□ -0.5
SSBP1-202ENST00000461433 GAREM2Q75VX8 874 aa11.91□□□□□ -0.5
SSBP1-202ENST00000461433 ZNF677Q86XU0 584 aa11.91□□□□□ -0.5
SSBP1-202ENST00000461433 ELMOD1Q8N336 334 aa11.91□□□□□ -0.5
SSBP1-202ENST00000461433 KCTD13Q8WZ19 329 aa11.91□□□□□ -0.5
SSBP1-202ENST00000461433 TCEAL4Q96EI5 215 aa11.91□□□□□ -0.5
SSBP1-202ENST00000461433 POMKQ9H5K3 350 aa11.91□□□□□ -0.5
SSBP1-202ENST00000461433 USP3Q9Y6I4 520 aa11.91□□□□□ -0.5
SSBP1-202ENST00000461433 MYO16Q9Y6X6 1858 aa11.9□□□□□ -0.5
SSBP1-202ENST00000461433 GOLGA6L3A6NEY3 463 aa11.9□□□□□ -0.5
SSBP1-202ENST00000461433 TADA3O75528 432 aa11.9□□□□□ -0.5
SSBP1-202ENST00000461433 HNRNPH3P31942 346 aaKnown RBP11.9□□□□□ -0.5
SSBP1-202ENST00000461433 CDH5P33151 784 aaPredicted RBP11.9□□□□□ -0.5
SSBP1-202ENST00000461433 KRT9P35527 623 aa11.9□□□□□ -0.5
SSBP1-202ENST00000461433 MTHFRP42898 656 aa11.9□□□□□ -0.5
SSBP1-202ENST00000461433 KIF11P52732 1056 aa11.9□□□□□ -0.5
SSBP1-202ENST00000461433 PABPC1LQ4VXU2 614 aaKnown RBP11.9□□□□□ -0.5
SSBP1-202ENST00000461433 PASD1Q8IV76 773 aa11.9□□□□□ -0.5
SSBP1-202ENST00000461433 ZNF397Q8NF99 534 aaPredicted RBP11.9□□□□□ -0.5
SSBP1-202ENST00000461433 ITFG1Q8TB96 612 aa11.9□□□□□ -0.5
SSBP1-202ENST00000461433 RIPOR3Q96MK2 946 aa11.9□□□□□ -0.5
SSBP1-202ENST00000461433 PCDHB18PQ96TA0 734 aa11.9□□□□□ -0.5
SSBP1-202ENST00000461433 DNAJC7Q99615 494 aa11.9□□□□□ -0.5
SSBP1-202ENST00000461433 SLC4A5Q9BY07 1137 aa11.9□□□□□ -0.5
SSBP1-202ENST00000461433 NUCKS1Q9H1E3 243 aaKnown RBP11.9□□□□□ -0.5
SSBP1-202ENST00000461433 ASAH2Q9NR71 780 aa11.9□□□□□ -0.5
SSBP1-202ENST00000461433 THEGQ9P2T0 379 aa11.9□□□□□ -0.5
SSBP1-202ENST00000461433 MAGED2Q9UNF1 606 aaPredicted RBP11.9□□□□□ -0.5
SSBP1-202ENST00000461433 RTN3O95197 1032 aaPredicted RBP11.89□□□□□ -0.51
SSBP1-202ENST00000461433 CYP1A1P04798 512 aaPredicted RBP11.89□□□□□ -0.51
SSBP1-202ENST00000461433 SKILP12757 684 aa11.89□□□□□ -0.51
SSBP1-202ENST00000461433 MYL4P12829 197 aa11.89□□□□□ -0.51
SSBP1-202ENST00000461433 CDC25BP30305 580 aa11.89□□□□□ -0.51
SSBP1-202ENST00000461433 PGFP49763 221 aa11.89□□□□□ -0.51
SSBP1-202ENST00000461433 RGS7P49802 495 aa11.89□□□□□ -0.51
SSBP1-202ENST00000461433 KCNQ1P51787 676 aa11.89□□□□□ -0.51
SSBP1-202ENST00000461433 ADKP55263 362 aaKnown RBP11.89□□□□□ -0.51
SSBP1-202ENST00000461433 SMAD2Q15796 467 aaKnown RBP11.89□□□□□ -0.51
SSBP1-202ENST00000461433 ASIC2Q16515 512 aa11.89□□□□□ -0.51
SSBP1-202ENST00000461433 PTCRAQ6ISU1 281 aaPredicted RBP11.89□□□□□ -0.51
SSBP1-202ENST00000461433 WDR59Q6PJI9 974 aa11.89□□□□□ -0.51
SSBP1-202ENST00000461433 PDZD4Q76G19 769 aaPredicted RBP11.89□□□□□ -0.51
SSBP1-202ENST00000461433 ZNF571Q7Z3V5 609 aaPredicted RBP11.89□□□□□ -0.51
SSBP1-202ENST00000461433 FMNL3Q8IVF7 1028 aa11.89□□□□□ -0.51
SSBP1-202ENST00000461433 SHKBP1Q8TBC3 707 aa11.89□□□□□ -0.51
SSBP1-202ENST00000461433 STK32AQ8WU08 396 aa11.89□□□□□ -0.51
SSBP1-202ENST00000461433 NECTIN4Q96NY8 510 aa11.89□□□□□ -0.51
SSBP1-202ENST00000461433 AGPAT1Q99943 283 aa11.89□□□□□ -0.51
SSBP1-202ENST00000461433 HAUS4Q9H6D7 363 aa11.89□□□□□ -0.51
SSBP1-202ENST00000461433 COMMD8Q9NX08 183 aa11.89□□□□□ -0.51
SSBP1-202ENST00000461433 DOCK8Q8NF50 2099 aa11.89□□□□□ -0.51
SSBP1-202ENST00000461433 CLUHO75153 1309 aa11.89□□□□□ -0.51
SSBP1-202ENST00000461433 A0A1W2PRU2 124 aa11.88□□□□□ -0.51
SSBP1-202ENST00000461433 MFAP3LO75121 409 aa11.88□□□□□ -0.51
SSBP1-202ENST00000461433 CCDC172P0C7W6 258 aa11.88□□□□□ -0.51
SSBP1-202ENST00000461433 IL9P15248 144 aa11.88□□□□□ -0.51
SSBP1-202ENST00000461433 GJA1P17302 382 aa11.88□□□□□ -0.51
SSBP1-202ENST00000461433 YWHAQP27348 245 aa11.88□□□□□ -0.51
SSBP1-202ENST00000461433 GABRR2P28476 465 aa11.88□□□□□ -0.51
SSBP1-202ENST00000461433 TKTL1P51854 596 aa11.88□□□□□ -0.51
SSBP1-202ENST00000461433 SLC8A3P57103 927 aa11.88□□□□□ -0.51
SSBP1-202ENST00000461433 NOMO3P69849 1222 aa11.88□□□□□ -0.51
SSBP1-202ENST00000461433 IFRD2Q12894 506 aaPredicted RBP11.88□□□□□ -0.51
SSBP1-202ENST00000461433 TAF10Q12962 218 aa11.88□□□□□ -0.51
SSBP1-202ENST00000461433 PDCLQ13371 301 aa11.88□□□□□ -0.51
SSBP1-202ENST00000461433 TAF12Q16514 161 aa11.88□□□□□ -0.51
SSBP1-202ENST00000461433 CYP4A22Q5TCH4 519 aa11.88□□□□□ -0.51
SSBP1-202ENST00000461433 PM20D1Q6GTS8 502 aa11.88□□□□□ -0.51
SSBP1-202ENST00000461433 BHLHA9Q7RTU4 235 aa11.88□□□□□ -0.51
SSBP1-202ENST00000461433 TMEM110Q86TL2 294 aa11.88□□□□□ -0.51
SSBP1-202ENST00000461433 TC2NQ8N9U0 490 aa11.88□□□□□ -0.51
SSBP1-202ENST00000461433 LEMD2Q8NC56 503 aa11.88□□□□□ -0.51
SSBP1-202ENST00000461433 C1orf131Q8NDD1 294 aaKnown RBP11.88□□□□□ -0.51
SSBP1-202ENST00000461433 OR8K1Q8NGG5 319 aa11.88□□□□□ -0.51
SSBP1-202ENST00000461433 HSFY1Q96LI6 401 aa11.88□□□□□ -0.51
SSBP1-202ENST00000461433 TJP2Q9UDY2 1190 aa11.88□□□□□ -0.51
SSBP1-202ENST00000461433 AKR1B15C9JRZ8 316 aaPredicted RBP11.87□□□□□ -0.51
SSBP1-202ENST00000461433 PIK3R2O00459 728 aa11.87□□□□□ -0.51
SSBP1-202ENST00000461433 PLEKP08567 350 aaPredicted RBP11.87□□□□□ -0.51
SSBP1-202ENST00000461433 ZDHHC11BP0C7U3 371 aa11.87□□□□□ -0.51
SSBP1-202ENST00000461433 UNGP13051 313 aaPredicted RBP11.87□□□□□ -0.51
SSBP1-202ENST00000461433 CEBPBP17676 345 aa11.87□□□□□ -0.51
SSBP1-202ENST00000461433 FSHRP23945 695 aa11.87□□□□□ -0.51
SSBP1-202ENST00000461433 KLHL30Q0D2K2 578 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms