RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 FAM20BO75063 409 aa3.66□□□□□ -1.82
VCL-203ENST00000461383 NCR1O76036 304 aa3.66□□□□□ -1.82
VCL-203ENST00000461383 ACTL6BO94805 426 aa3.66□□□□□ -1.82
VCL-203ENST00000461383 AGR2O95994 175 aa3.66□□□□□ -1.82
VCL-203ENST00000461383 CFIP05156 583 aa3.66□□□□□ -1.82
VCL-203ENST00000461383 GYS1P13807 737 aa3.66□□□□□ -1.82
VCL-203ENST00000461383 VEGFAP15692 232 aaPredicted RBP3.66□□□□□ -1.82
VCL-203ENST00000461383 MST1P26927 711 aa3.66□□□□□ -1.82
VCL-203ENST00000461383 EPHA3P29320 983 aa3.66□□□□□ -1.82
VCL-203ENST00000461383 SLC5A2P31639 672 aa3.66□□□□□ -1.82
VCL-203ENST00000461383 PAPOLAP51003 745 aaKnown RBP3.66□□□□□ -1.82
VCL-203ENST00000461383 BCAT1P54687 386 aa3.66□□□□□ -1.82
VCL-203ENST00000461383 AP2B1P63010 937 aa3.66□□□□□ -1.82
VCL-203ENST00000461383 RESTQ13127 1097 aa3.66□□□□□ -1.82
VCL-203ENST00000461383 RPS6KA2Q15349 733 aa3.66□□□□□ -1.82
VCL-203ENST00000461383 GEN1Q17RS7 908 aa3.66□□□□□ -1.82
VCL-203ENST00000461383 ZIK1Q3SY52 487 aaPredicted RBP3.66□□□□□ -1.82
VCL-203ENST00000461383 RABL3Q5HYI8 236 aa3.66□□□□□ -1.82
VCL-203ENST00000461383 DEPDC1Q5TB30 811 aa3.66□□□□□ -1.82
VCL-203ENST00000461383 MANEALQ5VSG8 457 aa3.66□□□□□ -1.82
VCL-203ENST00000461383 JAKMIP3Q5VZ66 844 aa3.66□□□□□ -1.82
VCL-203ENST00000461383 METRNLQ641Q3 311 aa3.66□□□□□ -1.82
VCL-203ENST00000461383 RINT1Q6NUQ1 792 aa3.66□□□□□ -1.82
VCL-203ENST00000461383 C2CD5Q86YS7 1000 aa3.66□□□□□ -1.82
VCL-203ENST00000461383 CLASRPQ8N2M8 674 aaKnown RBP3.66□□□□□ -1.82
VCL-203ENST00000461383 TMEM132CQ8N3T6 1108 aa3.66□□□□□ -1.82
VCL-203ENST00000461383 FSTL5Q8N475 847 aaPredicted RBP3.66□□□□□ -1.82
VCL-203ENST00000461383 B3GALNT2Q8NCR0 500 aa3.66□□□□□ -1.82
VCL-203ENST00000461383 OSCP1Q8WVF1 389 aa3.66□□□□□ -1.82
VCL-203ENST00000461383 FAM136AQ96C01 138 aa3.66□□□□□ -1.82
VCL-203ENST00000461383 EID2BQ96D98 161 aa3.66□□□□□ -1.82
VCL-203ENST00000461383 FAM227BQ96M60 508 aa3.66□□□□□ -1.82
VCL-203ENST00000461383 RBM15Q96T37 977 aaKnown RBP eCLIP3.66□□□□□ -1.82
VCL-203ENST00000461383 EIF2AK1Q9BQI3 630 aaKnown RBP3.66□□□□□ -1.82
VCL-203ENST00000461383 RTKNQ9BST9 563 aa3.66□□□□□ -1.82
VCL-203ENST00000461383 BDH2Q9BUT1 245 aa3.66□□□□□ -1.82
VCL-203ENST00000461383 TEX101Q9BY14 249 aa3.66□□□□□ -1.82
VCL-203ENST00000461383 MAF1Q9H063 256 aa3.66□□□□□ -1.82
VCL-203ENST00000461383 TAF1DQ9H5J8 278 aaPredicted RBP3.66□□□□□ -1.82
VCL-203ENST00000461383 SAGE1Q9NXZ1 904 aa3.66□□□□□ -1.82
VCL-203ENST00000461383 VSX1Q9NZR4 365 aaPredicted RBP3.66□□□□□ -1.82
VCL-203ENST00000461383 SCAF8Q9UPN6 1271 aaKnown RBP3.66□□□□□ -1.82
VCL-203ENST00000461383 USP22Q9UPT9 525 aa3.66□□□□□ -1.82
VCL-203ENST00000461383 MYRFQ9Y2G1 1151 aa3.66□□□□□ -1.82
VCL-203ENST00000461383 MAP3K2Q9Y2U5 619 aa3.66□□□□□ -1.82
VCL-203ENST00000461383 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.66□□□□□ -1.82
VCL-203ENST00000461383 SPATA31A3Q5VYP0 1347 aa3.66□□□□□ -1.82
VCL-203ENST00000461383 PNMA6EA0A0J9YXQ4 647 aa3.65□□□□□ -1.83
VCL-203ENST00000461383 GAGE12BA1L429 117 aa3.65□□□□□ -1.83
VCL-203ENST00000461383 GAGE12HA6NDE8 117 aa3.65□□□□□ -1.83
VCL-203ENST00000461383 RRN3P2A6NIE6 340 aa3.65□□□□□ -1.83
VCL-203ENST00000461383 J3KTA2 159 aa3.65□□□□□ -1.83
VCL-203ENST00000461383 NCAM2O15394 837 aa3.65□□□□□ -1.83
VCL-203ENST00000461383 CDKL5O76039 1030 aa3.65□□□□□ -1.83
VCL-203ENST00000461383 NDUFA10O95299 355 aa3.65□□□□□ -1.83
VCL-203ENST00000461383 PYGLP06737 847 aa3.65□□□□□ -1.83
VCL-203ENST00000461383 ELANEP08246 267 aa3.65□□□□□ -1.83
VCL-203ENST00000461383 ADORA2AP29274 412 aa3.65□□□□□ -1.83
VCL-203ENST00000461383 AARSP49588 968 aaKnown RBP eCLIP3.65□□□□□ -1.833e-12■■■■■ 123.6
VCL-203ENST00000461383 GATMP50440 423 aa3.65□□□□□ -1.83
VCL-203ENST00000461383 PLP2Q04941 152 aa3.65□□□□□ -1.83
VCL-203ENST00000461383 LMOD3Q0VAK6 560 aa3.65□□□□□ -1.83
VCL-203ENST00000461383 ATP1A4Q13733 1029 aa3.65□□□□□ -1.83
VCL-203ENST00000461383 PRKD1Q15139 912 aaPredicted RBP3.65□□□□□ -1.83
VCL-203ENST00000461383 CYP2A13Q16696 494 aa3.65□□□□□ -1.83
VCL-203ENST00000461383 TRIM71Q2Q1W2 868 aaKnown RBP3.65□□□□□ -1.83
VCL-203ENST00000461383 ZXDCQ2QGD7 858 aaPredicted RBP3.65□□□□□ -1.83
VCL-203ENST00000461383 VPS53Q5VIR6 699 aa3.65□□□□□ -1.83
VCL-203ENST00000461383 LIN54Q6MZP7 749 aa3.65□□□□□ -1.83
VCL-203ENST00000461383 ARMC6Q6NXE6 501 aa3.65□□□□□ -1.83
VCL-203ENST00000461383 ZNF585AQ6P3V2 769 aa3.65□□□□□ -1.83
VCL-203ENST00000461383 CYP26C1Q6V0L0 522 aa3.65□□□□□ -1.83
VCL-203ENST00000461383 Q6ZSN1 163 aa3.65□□□□□ -1.83
VCL-203ENST00000461383 SUGP1Q8IWZ8 645 aaKnown RBP3.65□□□□□ -1.83
VCL-203ENST00000461383 FTSJ3Q8IY81 847 aaKnown RBP3.65□□□□□ -1.83
VCL-203ENST00000461383 SYNE4Q8N205 404 aa3.65□□□□□ -1.83
VCL-203ENST00000461383 AFG1LQ8WV93 481 aa3.65□□□□□ -1.83
VCL-203ENST00000461383 WDR60Q8WVS4 1066 aa3.65□□□□□ -1.83
VCL-203ENST00000461383 EDAQ92838 391 aa3.65□□□□□ -1.83
VCL-203ENST00000461383 USP13Q92995 863 aaPredicted RBP3.65□□□□□ -1.83
VCL-203ENST00000461383 C3orf49Q96BT1 292 aa3.65□□□□□ -1.83
VCL-203ENST00000461383 ZBTB45Q96K62 511 aaPredicted RBP3.65□□□□□ -1.83
VCL-203ENST00000461383 UBXN10Q96LJ8 280 aa3.65□□□□□ -1.83
VCL-203ENST00000461383 OSBPL9Q96SU4 736 aa3.65□□□□□ -1.83
VCL-203ENST00000461383 EIF3CQ99613 913 aaKnown RBP3.65□□□□□ -1.83
VCL-203ENST00000461383 PYM1Q9BRP8 204 aaKnown RBP3.65□□□□□ -1.83
VCL-203ENST00000461383 ACTRT3Q9BYD9 372 aa3.65□□□□□ -1.83
VCL-203ENST00000461383 TRIM5Q9C035 493 aa3.65□□□□□ -1.83
VCL-203ENST00000461383 INO80BQ9C086 356 aaPredicted RBP3.65□□□□□ -1.83
VCL-203ENST00000461383 ZHX3Q9H4I2 956 aa3.65□□□□□ -1.83
VCL-203ENST00000461383 GALNT9Q9HCQ5 603 aa3.65□□□□□ -1.83
VCL-203ENST00000461383 AKIP1Q9NQ31 210 aa3.65□□□□□ -1.83
VCL-203ENST00000461383 INTS13Q9NVM9 706 aa3.65□□□□□ -1.83
VCL-203ENST00000461383 AURKAIP1Q9NWT8 199 aaPredicted RBP3.65□□□□□ -1.83
VCL-203ENST00000461383 CHST2Q9Y4C5 530 aa3.65□□□□□ -1.83
VCL-203ENST00000461383 DTNAQ9Y4J8 743 aa3.65□□□□□ -1.83
VCL-203ENST00000461383 KAT6BQ8WYB5 2073 aa3.65□□□□□ -1.83
VCL-203ENST00000461383 KRTAP23-1A1A580 65 aa3.64□□□□□ -1.83
VCL-203ENST00000461383 PSMD9O00233 223 aa3.64□□□□□ -1.83
VCL-203ENST00000461383 PCDH17O14917 1159 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms