RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 NCAPH2Q6IBW4 605 aa8.9□□□□□ -0.98
ECHDC1-212ENST00000461239 ANO5Q75V66 913 aa8.9□□□□□ -0.98
ECHDC1-212ENST00000461239 TRMT1LQ7Z2T5 733 aaKnown RBP8.9□□□□□ -0.98
ECHDC1-212ENST00000461239 SPPL2CQ8IUH8 684 aa8.9□□□□□ -0.98
ECHDC1-212ENST00000461239 NLGN4XQ8N0W4 816 aa8.9□□□□□ -0.98
ECHDC1-212ENST00000461239 OXR1Q8N573 874 aa8.9□□□□□ -0.98
ECHDC1-212ENST00000461239 LINC01465Q8N7H1 131 aa8.9□□□□□ -0.98
ECHDC1-212ENST00000461239 ATP6V0A1Q93050 837 aa8.9□□□□□ -0.98
ECHDC1-212ENST00000461239 DYDC2Q96IM9 177 aa8.9□□□□□ -0.98
ECHDC1-212ENST00000461239 EIF2AK1Q9BQI3 630 aaKnown RBP8.9□□□□□ -0.98
ECHDC1-212ENST00000461239 SH2D3AQ9BRG2 576 aa8.9□□□□□ -0.98
ECHDC1-212ENST00000461239 MMTAG2Q9BU76 263 aaKnown RBP8.9□□□□□ -0.98
ECHDC1-212ENST00000461239 SEMA6BQ9H3T3 888 aa8.9□□□□□ -0.98
ECHDC1-212ENST00000461239 MS4A5Q9H3V2 200 aa8.9□□□□□ -0.98
ECHDC1-212ENST00000461239 HIPK3Q9H422 1215 aa8.9□□□□□ -0.98
ECHDC1-212ENST00000461239 ZMAT4Q9H898 229 aa8.9□□□□□ -0.98
ECHDC1-212ENST00000461239 C14orf119Q9NWQ9 140 aa8.9□□□□□ -0.98
ECHDC1-212ENST00000461239 NOL7Q9UMY1 257 aaKnown RBP8.9□□□□□ -0.98
ECHDC1-212ENST00000461239 PP2D1A8MPX8 630 aa8.89□□□□□ -0.99
ECHDC1-212ENST00000461239 HBP1O60381 514 aa8.89□□□□□ -0.99
ECHDC1-212ENST00000461239 PSPNO60542 156 aa8.89□□□□□ -0.99
ECHDC1-212ENST00000461239 MED24O75448 989 aa8.89□□□□□ -0.99
ECHDC1-212ENST00000461239 C22orf31O95567 290 aa8.89□□□□□ -0.99
ECHDC1-212ENST00000461239 ZSCAN22P10073 491 aaPredicted RBP8.89□□□□□ -0.99
ECHDC1-212ENST00000461239 MYBL2P10244 700 aa8.89□□□□□ -0.99
ECHDC1-212ENST00000461239 CKBP12277 381 aa8.89□□□□□ -0.99
ECHDC1-212ENST00000461239 CSF2RAP15509 400 aa8.89□□□□□ -0.99
ECHDC1-212ENST00000461239 ITGB7P26010 798 aa8.89□□□□□ -0.99
ECHDC1-212ENST00000461239 CDC25AP30304 524 aa8.89□□□□□ -0.99
ECHDC1-212ENST00000461239 CD97P48960 835 aa8.89□□□□□ -0.99
ECHDC1-212ENST00000461239 ERVFC1P60507 584 aa8.89□□□□□ -0.99
ECHDC1-212ENST00000461239 PSMC5P62195 406 aa8.89□□□□□ -0.99
ECHDC1-212ENST00000461239 CYP4A11Q02928 519 aa8.89□□□□□ -0.99
ECHDC1-212ENST00000461239 PTPN21Q16825 1174 aa8.89□□□□□ -0.99
ECHDC1-212ENST00000461239 TCTN1Q2MV58 587 aa8.89□□□□□ -0.99
ECHDC1-212ENST00000461239 TIGD5Q53EQ6 642 aa8.89□□□□□ -0.99
ECHDC1-212ENST00000461239 ZNF618Q5T7W0 954 aa8.89□□□□□ -0.99
ECHDC1-212ENST00000461239 MFSD5Q6N075 450 aa8.89□□□□□ -0.99
ECHDC1-212ENST00000461239 ESRP1Q6NXG1 681 aaKnown RBP8.89□□□□□ -0.99
ECHDC1-212ENST00000461239 SLC23A3Q6PIS1 610 aa8.89□□□□□ -0.99
ECHDC1-212ENST00000461239 MTHFD1LQ6UB35 978 aa8.89□□□□□ -0.99
ECHDC1-212ENST00000461239 RASSF3Q86WH2 238 aa8.89□□□□□ -0.99
ECHDC1-212ENST00000461239 ZNF610Q8N9Z0 462 aa8.89□□□□□ -0.99
ECHDC1-212ENST00000461239 FUBP3Q96I24 572 aaKnown RBP eCLIP8.89□□□□□ -0.99
ECHDC1-212ENST00000461239 USP28Q96RU2 1077 aa8.89□□□□□ -0.99
ECHDC1-212ENST00000461239 SLC13A1Q9BZW2 595 aa8.89□□□□□ -0.99
ECHDC1-212ENST00000461239 PCIF1Q9H4Z3 704 aa8.89□□□□□ -0.99
ECHDC1-212ENST00000461239 ATP23Q9Y6H3 246 aa8.89□□□□□ -0.99
ECHDC1-212ENST00000461239 KIAA1324LA8MWY0 1029 aaPredicted RBP8.88□□□□□ -0.99
ECHDC1-212ENST00000461239 NBNO60934 754 aa8.88□□□□□ -0.99
ECHDC1-212ENST00000461239 LYPLA2O95372 231 aa8.88□□□□□ -0.99
ECHDC1-212ENST00000461239 MT-CO1P00395 513 aa8.88□□□□□ -0.99
ECHDC1-212ENST00000461239 CHRNA1P02708 482 aa8.88□□□□□ -0.99
ECHDC1-212ENST00000461239 HPXP02790 462 aa8.88□□□□□ -0.99
ECHDC1-212ENST00000461239 IQCF3P0C7M6 154 aa8.88□□□□□ -0.99
ECHDC1-212ENST00000461239 PTX3P26022 381 aaPredicted RBP8.88□□□□□ -0.99
ECHDC1-212ENST00000461239 KLRC1P26715 233 aa8.88□□□□□ -0.99
ECHDC1-212ENST00000461239 LSP1P33241 339 aa8.88□□□□□ -0.99
ECHDC1-212ENST00000461239 PRPHP41219 470 aa8.88□□□□□ -0.99
ECHDC1-212ENST00000461239 QARSP47897 775 aaKnown RBP8.88□□□□□ -0.99
ECHDC1-212ENST00000461239 NPEPPSP55786 919 aa8.88□□□□□ -0.99
ECHDC1-212ENST00000461239 TBX4P57082 545 aa8.88□□□□□ -0.99
ECHDC1-212ENST00000461239 MGAT3Q09327 533 aa8.88□□□□□ -0.99
ECHDC1-212ENST00000461239 DRP2Q13474 957 aa8.88□□□□□ -0.99
ECHDC1-212ENST00000461239 ZNF484Q5JVG2 852 aa8.88□□□□□ -0.99
ECHDC1-212ENST00000461239 PLA2G4FQ68DD2 849 aa8.88□□□□□ -0.99
ECHDC1-212ENST00000461239 CC2D1AQ6P1N0 951 aaPredicted RBP8.88□□□□□ -0.99
ECHDC1-212ENST00000461239 RPAINQ86UA6 219 aa8.88□□□□□ -0.99
ECHDC1-212ENST00000461239 CATSPER3Q86XQ3 398 aa8.88□□□□□ -0.99
ECHDC1-212ENST00000461239 WDR75Q8IWA0 830 aaKnown RBP8.88□□□□□ -0.99
ECHDC1-212ENST00000461239 RBM12BQ8IXT5 1001 aaKnown RBP8.88□□□□□ -0.99
ECHDC1-212ENST00000461239 CMIPQ8IY22 773 aa8.88□□□□□ -0.99
ECHDC1-212ENST00000461239 C4orf19Q8IY42 314 aa8.88□□□□□ -0.99
ECHDC1-212ENST00000461239 KIAA0319LQ8IZA0 1049 aa8.88□□□□□ -0.99
ECHDC1-212ENST00000461239 FLCNQ8NFG4 579 aa8.88□□□□□ -0.99
ECHDC1-212ENST00000461239 LRRC15Q8TF66 581 aa8.88□□□□□ -0.99
ECHDC1-212ENST00000461239 DNAJB3Q8WWF6 145 aa8.88□□□□□ -0.99
ECHDC1-212ENST00000461239 RELTQ969Z4 430 aa8.88□□□□□ -0.99
ECHDC1-212ENST00000461239 CCDC120Q96HB5 630 aa8.88□□□□□ -0.99
ECHDC1-212ENST00000461239 LXNQ9BS40 222 aa8.88□□□□□ -0.99
ECHDC1-212ENST00000461239 RHOBTB2Q9BYZ6 727 aa8.88□□□□□ -0.99
ECHDC1-212ENST00000461239 SMOC1Q9H4F8 434 aa8.88□□□□□ -0.99
ECHDC1-212ENST00000461239 ACSS2Q9NR19 701 aa8.88□□□□□ -0.99
ECHDC1-212ENST00000461239 TOPORSQ9NS56 1045 aaPredicted RBP8.88□□□□□ -0.99
ECHDC1-212ENST00000461239 GEMIN8Q9NWZ8 242 aaKnown RBP8.88□□□□□ -0.99
ECHDC1-212ENST00000461239 TUBE1Q9UJT0 475 aa8.88□□□□□ -0.99
ECHDC1-212ENST00000461239 CHD9Q3L8U1 2897 aa8.87□□□□□ -0.99
ECHDC1-212ENST00000461239 CDH23Q9H251 3354 aa8.87□□□□□ -0.99
ECHDC1-212ENST00000461239 IGKV6-21A0A0C4DH24 114 aa8.87□□□□□ -0.99
ECHDC1-212ENST00000461239 RRN3P2A6NIE6 340 aa8.87□□□□□ -0.99
ECHDC1-212ENST00000461239 LAD1O00515 517 aa8.87□□□□□ -0.99
ECHDC1-212ENST00000461239 HGSO14964 777 aaPredicted RBP8.87□□□□□ -0.99
ECHDC1-212ENST00000461239 MAFKO60675 156 aa8.87□□□□□ -0.99
ECHDC1-212ENST00000461239 LTFP02788 710 aa8.87□□□□□ -0.99
ECHDC1-212ENST00000461239 HSP90AA1P07900 732 aaKnown RBP8.87□□□□□ -0.99
ECHDC1-212ENST00000461239 THPOP40225 353 aa8.87□□□□□ -0.99
ECHDC1-212ENST00000461239 CYP4F8P98187 520 aa8.87□□□□□ -0.99
ECHDC1-212ENST00000461239 LRRC32Q14392 662 aa8.87□□□□□ -0.99
ECHDC1-212ENST00000461239 PDIA5Q14554 519 aa8.87□□□□□ -0.99
ECHDC1-212ENST00000461239 XKR3Q5GH77 459 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms