RNA–Protein interactions for RNA: ENST00000461219.5

SCAF8-204, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 5

Gene SCAF8, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-204ENST00000461219 USP13Q92995 863 aaPredicted RBP21.69■■□□□ 1.06
SCAF8-204ENST00000461219 ZFYVE19Q96K21 471 aa21.69■■□□□ 1.06
SCAF8-204ENST00000461219 CYP2S1Q96SQ9 504 aa21.69■■□□□ 1.06
SCAF8-204ENST00000461219 SMOQ99835 787 aa21.69■■□□□ 1.06
SCAF8-204ENST00000461219 TMEM30AQ9NV96 361 aa21.69■■□□□ 1.06
SCAF8-204ENST00000461219 COMMD8Q9NX08 183 aa21.69■■□□□ 1.06
SCAF8-204ENST00000461219 CCL26Q9Y258 94 aa21.69■■□□□ 1.06
SCAF8-204ENST00000461219 PCDHB4Q9Y5E5 795 aa21.69■■□□□ 1.06
SCAF8-204ENST00000461219 PIAS3Q9Y6X2 628 aa21.69■■□□□ 1.06
SCAF8-204ENST00000461219 PMM2O15305 246 aa21.68■■□□□ 1.06
SCAF8-204ENST00000461219 PFKLP17858 780 aa21.68■■□□□ 1.06
SCAF8-204ENST00000461219 ZNF268Q14587 947 aaPredicted RBP21.68■■□□□ 1.06
SCAF8-204ENST00000461219 SGO2Q562F6 1265 aa21.68■■□□□ 1.06
SCAF8-204ENST00000461219 PPP1R26Q5T8A7 1209 aaPredicted RBP21.68■■□□□ 1.06
SCAF8-204ENST00000461219 IER5LQ5T953 404 aa21.68■■□□□ 1.06
SCAF8-204ENST00000461219 SASS6Q6UVJ0 657 aa21.68■■□□□ 1.06
SCAF8-204ENST00000461219 PJA1Q8NG27 643 aa21.68■■□□□ 1.06
SCAF8-204ENST00000461219 SCAMP5Q8TAC9 235 aa21.68■■□□□ 1.06
SCAF8-204ENST00000461219 WHAMMQ8TF30 809 aa21.68■■□□□ 1.06
SCAF8-204ENST00000461219 OVCA2Q8WZ82 227 aa21.68■■□□□ 1.06
SCAF8-204ENST00000461219 NELL2Q99435 816 aa21.68■■□□□ 1.06
SCAF8-204ENST00000461219 TRPV5Q9NQA5 729 aa21.68■■□□□ 1.06
SCAF8-204ENST00000461219 GCNT4Q9P109 453 aa21.68■■□□□ 1.06
SCAF8-204ENST00000461219 HESX1Q9UBX0 185 aa21.68■■□□□ 1.06
SCAF8-204ENST00000461219 ARIH1Q9Y4X5 557 aaPredicted RBP21.68■■□□□ 1.06
SCAF8-204ENST00000461219 NCANO14594 1321 aa21.68■■□□□ 1.06
SCAF8-204ENST00000461219 COL4A2P08572 1712 aa21.67■■□□□ 1.06
SCAF8-204ENST00000461219 ZNF840PA6NDX5 716 aa21.67■■□□□ 1.06
SCAF8-204ENST00000461219 FAM170BA6NMN3 283 aa21.67■■□□□ 1.06
SCAF8-204ENST00000461219 PES1O00541 588 aaKnown RBP21.67■■□□□ 1.06
SCAF8-204ENST00000461219 PI15O43692 258 aa21.67■■□□□ 1.06
SCAF8-204ENST00000461219 DCNP07585 359 aaKnown RBP21.67■■□□□ 1.06
SCAF8-204ENST00000461219 MBL2P11226 248 aaPredicted RBP21.67■■□□□ 1.06
SCAF8-204ENST00000461219 CD72P21854 359 aa21.67■■□□□ 1.06
SCAF8-204ENST00000461219 ERCC5P28715 1186 aaPredicted RBP21.67■■□□□ 1.06
SCAF8-204ENST00000461219 RAD23BP54727 409 aa21.67■■□□□ 1.06
SCAF8-204ENST00000461219 PTPN5P54829 565 aa21.67■■□□□ 1.06
SCAF8-204ENST00000461219 CLEC20AQ6ZU45 233 aa21.67■■□□□ 1.06
SCAF8-204ENST00000461219 SLC4A11Q8NBS3 891 aa21.67■■□□□ 1.06
SCAF8-204ENST00000461219 EHBP1Q8NDI1 1231 aa21.67■■□□□ 1.06
SCAF8-204ENST00000461219 TTC8Q8TAM2 541 aa21.67■■□□□ 1.06
SCAF8-204ENST00000461219 FAM122AQ96E09 287 aa21.67■■□□□ 1.06
SCAF8-204ENST00000461219 THAP9Q9H5L6 903 aa21.67■■□□□ 1.06
SCAF8-204ENST00000461219 GKN1Q9NS71 199 aa21.67■■□□□ 1.06
SCAF8-204ENST00000461219 CHORDC1Q9UHD1 332 aaPredicted RBP21.67■■□□□ 1.06
SCAF8-204ENST00000461219 NDRG2Q9UN36 371 aaKnown RBP21.67■■□□□ 1.06
SCAF8-204ENST00000461219 COL4A3Q01955 1670 aa21.66■■□□□ 1.06
SCAF8-204ENST00000461219 GALR2O43603 387 aaPredicted RBP21.66■■□□□ 1.06
SCAF8-204ENST00000461219 BEST1O76090 585 aa21.66■■□□□ 1.06
SCAF8-204ENST00000461219 ACO1P21399 889 aaKnown RBP21.66■■□□□ 1.06
SCAF8-204ENST00000461219 IFNAR2P48551 515 aa21.66■■□□□ 1.06
SCAF8-204ENST00000461219 MTF1Q14872 753 aa21.66■■□□□ 1.06
SCAF8-204ENST00000461219 HECTD3Q5T447 861 aa21.66■■□□□ 1.06
SCAF8-204ENST00000461219 C1orf228Q6PIY5 440 aa21.66■■□□□ 1.06
SCAF8-204ENST00000461219 TMEM270Q6UE05 265 aa21.66■■□□□ 1.06
SCAF8-204ENST00000461219 RRAGAQ7L523 313 aa21.66■■□□□ 1.06
SCAF8-204ENST00000461219 FAM3CQ92520 227 aa21.66■■□□□ 1.06
SCAF8-204ENST00000461219 MSANTD3Q96H12 275 aa21.66■■□□□ 1.06
SCAF8-204ENST00000461219 SLC22A12Q96S37 553 aa21.66■■□□□ 1.06
SCAF8-204ENST00000461219 DUSP16Q9BY84 665 aa21.66■■□□□ 1.06
SCAF8-204ENST00000461219 INTS2Q9H0H0 1204 aaKnown RBP21.66■■□□□ 1.06
SCAF8-204ENST00000461219 IRF2BPLQ9H1B7 796 aa21.66■■□□□ 1.06
SCAF8-204ENST00000461219 C8orf33Q9H7E9 229 aaPredicted RBP21.66■■□□□ 1.06
SCAF8-204ENST00000461219 CSNK1G1Q9HCP0 422 aa21.66■■□□□ 1.06
SCAF8-204ENST00000461219 LTB4R2Q9NPC1 389 aa21.66■■□□□ 1.06
SCAF8-204ENST00000461219 TLR8Q9NR97 1041 aaKnown RBP21.66■■□□□ 1.06
SCAF8-204ENST00000461219 GMIPQ9P107 970 aa21.66■■□□□ 1.06
SCAF8-204ENST00000461219 PRKCSHP14314 528 aaPredicted RBP21.65■■□□□ 1.06
SCAF8-204ENST00000461219 GLULP15104 373 aa21.65■■□□□ 1.06
SCAF8-204ENST00000461219 GOLGA7BQ2TAP0 167 aa21.65■■□□□ 1.06
SCAF8-204ENST00000461219 ITPRIPL2Q3MIP1 535 aa21.65■■□□□ 1.06
SCAF8-204ENST00000461219 HSP90AA4PQ58FG1 418 aa21.65■■□□□ 1.06
SCAF8-204ENST00000461219 CT47A1Q5JQC4 288 aaPredicted RBP21.65■■□□□ 1.06
SCAF8-204ENST00000461219 ZMIZ2Q8NF64 920 aa21.65■■□□□ 1.06
SCAF8-204ENST00000461219 SH3RF2Q8TEC5 729 aa21.65■■□□□ 1.06
SCAF8-204ENST00000461219 LRRC3BQ96PB8 259 aa21.65■■□□□ 1.06
SCAF8-204ENST00000461219 DUS2Q9NX74 493 aaKnown RBP21.65■■□□□ 1.06
SCAF8-204ENST00000461219 GTSE1Q9NYZ3 720 aa21.65■■□□□ 1.06
SCAF8-204ENST00000461219 TNFRSF10BO14763 440 aa21.64■■□□□ 1.05
SCAF8-204ENST00000461219 AMPD2Q01433 879 aa21.64■■□□□ 1.05
SCAF8-204ENST00000461219 PDGFRLQ15198 375 aa21.64■■□□□ 1.05
SCAF8-204ENST00000461219 CCDC183Q5T5S1 534 aa21.64■■□□□ 1.05
SCAF8-204ENST00000461219 GBP6Q6ZN66 633 aa21.64■■□□□ 1.05
SCAF8-204ENST00000461219 DDX42Q86XP3 938 aaKnown RBP eCLIP21.64■■□□□ 1.05
SCAF8-204ENST00000461219 CCDC105Q8IYK2 499 aa21.64■■□□□ 1.05
SCAF8-204ENST00000461219 DTWD2Q8NBA8 298 aa21.64■■□□□ 1.05
SCAF8-204ENST00000461219 CRACR2AQ9BSW2 395 aa21.64■■□□□ 1.05
SCAF8-204ENST00000461219 EBF3Q9H4W6 596 aa21.64■■□□□ 1.05
SCAF8-204ENST00000461219 PNPLA8Q9NP80 782 aa21.64■■□□□ 1.05
SCAF8-204ENST00000461219 SMPD4Q9NXE4 827 aa21.64■■□□□ 1.05
SCAF8-204ENST00000461219 KIAA1257Q9ULG3 409 aa21.64■■□□□ 1.05
SCAF8-204ENST00000461219 ARHGAP26Q9UNA1 814 aa21.64■■□□□ 1.05
SCAF8-204ENST00000461219 TPM2P07951 284 aa21.63■■□□□ 1.05
SCAF8-204ENST00000461219 VDRP11473 427 aa21.63■■□□□ 1.05
SCAF8-204ENST00000461219 KRT5P13647 590 aa21.63■■□□□ 1.05
SCAF8-204ENST00000461219 BCAT1P54687 386 aa21.63■■□□□ 1.05
SCAF8-204ENST00000461219 GCNT1Q02742 428 aa21.63■■□□□ 1.05
SCAF8-204ENST00000461219 TNK2Q07912 1038 aa21.63■■□□□ 1.05
SCAF8-204ENST00000461219 MAN2A1Q16706 1144 aa21.63■■□□□ 1.05
SCAF8-204ENST00000461219 ARHGAP17Q68EM7 881 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms