RNA–Protein interactions for RNA: ENST00000461187.5

SMPD4-216, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 659 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-216ENST00000461187 PPP3CCP48454 512 aa15.66■□□□□ 0.1
SMPD4-216ENST00000461187 MYL6P60660 151 aa15.66■□□□□ 0.1
SMPD4-216ENST00000461187 TNNC1P63316 161 aa15.66■□□□□ 0.1
SMPD4-216ENST00000461187 PLK5Q496M5 336 aa15.66■□□□□ 0.1
SMPD4-216ENST00000461187 AASDHQ4L235 1098 aaPredicted RBP15.66■□□□□ 0.1
SMPD4-216ENST00000461187 FOXD4L5Q5VV16 416 aaPredicted RBP15.66■□□□□ 0.1
SMPD4-216ENST00000461187 KIAA1958Q8N8K9 716 aa15.66■□□□□ 0.1
SMPD4-216ENST00000461187 C12orf50Q8NA57 414 aaPredicted RBP15.66■□□□□ 0.1
SMPD4-216ENST00000461187 PLEKHO2Q8TD55 490 aa15.66■□□□□ 0.1
SMPD4-216ENST00000461187 FOXD4L4Q8WXT5 416 aaPredicted RBP15.66■□□□□ 0.1
SMPD4-216ENST00000461187 ACDQ96AP0 544 aa15.66■□□□□ 0.1
SMPD4-216ENST00000461187 B3GNT5Q9BYG0 378 aa15.66■□□□□ 0.1
SMPD4-216ENST00000461187 ZNF518BQ9C0D4 1074 aa15.66■□□□□ 0.1
SMPD4-216ENST00000461187 DUSP15Q9H1R2 295 aaPredicted RBP15.66■□□□□ 0.1
SMPD4-216ENST00000461187 SLC39A2Q9NP94 309 aa15.66■□□□□ 0.1
SMPD4-216ENST00000461187 RXFP3Q9NSD7 469 aa15.66■□□□□ 0.1
SMPD4-216ENST00000461187 PCDHGA5Q9Y5G8 931 aa15.66■□□□□ 0.1
SMPD4-216ENST00000461187 PVALEFA0A1B0GWK0 134 aa15.65■□□□□ 0.1
SMPD4-216ENST00000461187 ANTXRLA6NF34 631 aa15.65■□□□□ 0.1
SMPD4-216ENST00000461187 CLDN5O00501 218 aa15.65■□□□□ 0.1
SMPD4-216ENST00000461187 TM4SF5O14894 197 aa15.65■□□□□ 0.1
SMPD4-216ENST00000461187 DCLK1O15075 740 aa15.65■□□□□ 0.1
SMPD4-216ENST00000461187 CYP17A1P05093 508 aa15.65■□□□□ 0.1
SMPD4-216ENST00000461187 ATICP31939 592 aa15.65■□□□□ 0.1
SMPD4-216ENST00000461187 CASP4P49662 377 aa15.65■□□□□ 0.1
SMPD4-216ENST00000461187 TAF10Q12962 218 aa15.65■□□□□ 0.1
SMPD4-216ENST00000461187 TRPC3Q13507 836 aa15.65■□□□□ 0.1
SMPD4-216ENST00000461187 CUL4BQ13620 913 aa15.65■□□□□ 0.1
SMPD4-216ENST00000461187 KNOP1Q1ED39 458 aaKnown RBP15.65■□□□□ 0.1
SMPD4-216ENST00000461187 FILIP1Q7Z7B0 1213 aa15.65■□□□□ 0.1
SMPD4-216ENST00000461187 ADGRG2Q8IZP9 1017 aa15.65■□□□□ 0.1
SMPD4-216ENST00000461187 B3GALNT2Q8NCR0 500 aa15.65■□□□□ 0.1
SMPD4-216ENST00000461187 USP33Q8TEY7 942 aa15.65■□□□□ 0.1
SMPD4-216ENST00000461187 ELOVL4Q9GZR5 314 aa15.65■□□□□ 0.1
SMPD4-216ENST00000461187 SMOC1Q9H4F8 434 aa15.65■□□□□ 0.1
SMPD4-216ENST00000461187 CGNQ9P2M7 1197 aaKnown RBP15.65■□□□□ 0.1
SMPD4-216ENST00000461187 NXF1Q9UBU9 619 aaKnown RBP15.65■□□□□ 0.1
SMPD4-216ENST00000461187 PCDHA7Q9UN72 937 aa15.65■□□□□ 0.1
SMPD4-216ENST00000461187 CPQQ9Y646 472 aa15.65■□□□□ 0.1
SMPD4-216ENST00000461187 A8MXQ7 604 aa15.64■□□□□ 0.09
SMPD4-216ENST00000461187 ABL1P00519 1130 aa15.64■□□□□ 0.09
SMPD4-216ENST00000461187 MPLP40238 635 aa15.64■□□□□ 0.09
SMPD4-216ENST00000461187 AFMP43652 599 aa15.64■□□□□ 0.09
SMPD4-216ENST00000461187 FOXD4L6Q3SYB3 417 aaPredicted RBP15.64■□□□□ 0.09
SMPD4-216ENST00000461187 C2orf27AQ580R0 203 aa15.64■□□□□ 0.09
SMPD4-216ENST00000461187 TDRD10Q5VZ19 366 aaKnown RBP15.64■□□□□ 0.09
SMPD4-216ENST00000461187 RESP18Q5W5W9 173 aa15.64■□□□□ 0.09
SMPD4-216ENST00000461187 IL31Q6EBC2 164 aa15.64■□□□□ 0.09
SMPD4-216ENST00000461187 FOXD4L3Q6VB84 417 aaPredicted RBP15.64■□□□□ 0.09
SMPD4-216ENST00000461187 CCDC26Q8TAB7 109 aa15.64■□□□□ 0.09
SMPD4-216ENST00000461187 DDX1Q92499 740 aaKnown RBP15.64■□□□□ 0.09
SMPD4-216ENST00000461187 SNX21Q969T3 373 aa15.64■□□□□ 0.09
SMPD4-216ENST00000461187 SYAP1Q96A49 352 aaPredicted RBP15.64■□□□□ 0.09
SMPD4-216ENST00000461187 SLITRK1Q96PX8 696 aa15.64■□□□□ 0.09
SMPD4-216ENST00000461187 VRTNQ9H8Y1 702 aa15.64■□□□□ 0.09
SMPD4-216ENST00000461187 SMPD4Q9NXE4 827 aa15.64■□□□□ 0.09
SMPD4-216ENST00000461187 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.63■□□□□ 0.09
SMPD4-216ENST00000461187 EXOC3O60645 756 aa15.63■□□□□ 0.09
SMPD4-216ENST00000461187 F13A1P00488 732 aa15.63■□□□□ 0.09
SMPD4-216ENST00000461187 ZSCAN22P10073 491 aaPredicted RBP15.63■□□□□ 0.09
SMPD4-216ENST00000461187 YWHAQP27348 245 aa15.63■□□□□ 0.09
SMPD4-216ENST00000461187 DGKEP52429 567 aa15.63■□□□□ 0.09
SMPD4-216ENST00000461187 CDH8P55286 799 aa15.63■□□□□ 0.09
SMPD4-216ENST00000461187 SEC13P55735 322 aa15.63■□□□□ 0.09
SMPD4-216ENST00000461187 CLDN10P78369 228 aa15.63■□□□□ 0.09
SMPD4-216ENST00000461187 IFRD2Q12894 506 aaPredicted RBP15.63■□□□□ 0.09
SMPD4-216ENST00000461187 DHCR24Q15392 516 aa15.63■□□□□ 0.09
SMPD4-216ENST00000461187 STPG1Q5TH74 334 aa15.63■□□□□ 0.09
SMPD4-216ENST00000461187 PAQR9Q6ZVX9 377 aa15.63■□□□□ 0.09
SMPD4-216ENST00000461187 GRAMD1CQ8IYS0 662 aa15.63■□□□□ 0.09
SMPD4-216ENST00000461187 NUP93Q8N1F7 819 aa15.63■□□□□ 0.09
SMPD4-216ENST00000461187 PARD3BQ8TEW8 1205 aa15.63■□□□□ 0.09
SMPD4-216ENST00000461187 SMYD3Q9H7B4 428 aa15.63■□□□□ 0.09
SMPD4-216ENST00000461187 VPS45Q9NRW7 570 aa15.63■□□□□ 0.09
SMPD4-216ENST00000461187 FAM13BQ9NYF5 915 aa15.63■□□□□ 0.09
SMPD4-216ENST00000461187 MMP17Q9ULZ9 603 aa15.63■□□□□ 0.09
SMPD4-216ENST00000461187 USP24Q9UPU5 2620 aa15.63■□□□□ 0.09
SMPD4-216ENST00000461187 LRRIQ3A6PVS8 624 aaPredicted RBP15.62■□□□□ 0.09
SMPD4-216ENST00000461187 SLC9A3R1O14745 358 aaPredicted RBP15.62■□□□□ 0.09
SMPD4-216ENST00000461187 SCAMP3O14828 347 aaKnown RBP15.62■□□□□ 0.09
SMPD4-216ENST00000461187 KLRC4O43908 158 aa15.62■□□□□ 0.09
SMPD4-216ENST00000461187 PHACTR2O75167 634 aa15.62■□□□□ 0.09
SMPD4-216ENST00000461187 RHOBTB1O94844 696 aa15.62■□□□□ 0.09
SMPD4-216ENST00000461187 RTN3O95197 1032 aaPredicted RBP15.62■□□□□ 0.09
SMPD4-216ENST00000461187 VNN1O95497 513 aa15.62■□□□□ 0.09
SMPD4-216ENST00000461187 C4BPAP04003 597 aaKnown RBP15.62■□□□□ 0.09
SMPD4-216ENST00000461187 MBL2P11226 248 aaPredicted RBP15.62■□□□□ 0.09
SMPD4-216ENST00000461187 CHRM1P11229 460 aaPredicted RBP15.62■□□□□ 0.09
SMPD4-216ENST00000461187 SLC6A11P48066 632 aa15.62■□□□□ 0.09
SMPD4-216ENST00000461187 ME1P48163 572 aa15.62■□□□□ 0.09
SMPD4-216ENST00000461187 MESP2Q0VG99 397 aa15.62■□□□□ 0.09
SMPD4-216ENST00000461187 ELF2Q15723 593 aa15.62■□□□□ 0.09
SMPD4-216ENST00000461187 RHBDF2Q6PJF5 856 aa15.62■□□□□ 0.09
SMPD4-216ENST00000461187 RASSF3Q86WH2 238 aa15.62■□□□□ 0.09
SMPD4-216ENST00000461187 SFTPA1Q8IWL2 248 aa15.62■□□□□ 0.09
SMPD4-216ENST00000461187 TSTD1Q8NFU3 115 aa15.62■□□□□ 0.09
SMPD4-216ENST00000461187 ELMO3Q96BJ8 720 aa15.62■□□□□ 0.09
SMPD4-216ENST00000461187 KCNK16Q96T55 309 aa15.62■□□□□ 0.09
SMPD4-216ENST00000461187 SDCBP2Q9H190 292 aa15.62■□□□□ 0.09
SMPD4-216ENST00000461187 DMAC2Q9NW81 257 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms