RNA–Protein interactions for RNA: ENST00000460569.1

UPF2-204, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF2, Length 640 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-204ENST00000460569 SLC35F5Q8WV83 523 aa10.73□□□□□ -0.69
UPF2-204ENST00000460569 CPA5Q8WXQ8 436 aa10.73□□□□□ -0.69
UPF2-204ENST00000460569 PPM1EQ8WY54 764 aa10.73□□□□□ -0.69
UPF2-204ENST00000460569 PABPC5Q96DU9 382 aaKnown RBP10.73□□□□□ -0.69
UPF2-204ENST00000460569 SPATA17Q96L03 361 aa10.73□□□□□ -0.69
UPF2-204ENST00000460569 CCDC42Q96M95 316 aa10.73□□□□□ -0.69
UPF2-204ENST00000460569 CPXM1Q96SM3 734 aa10.73□□□□□ -0.69
UPF2-204ENST00000460569 BAG1Q99933 345 aaPredicted RBP10.73□□□□□ -0.69
UPF2-204ENST00000460569 APOL5Q9BWW9 433 aa10.73□□□□□ -0.69
UPF2-204ENST00000460569 SYNCQ9H7C4 482 aa10.73□□□□□ -0.69
UPF2-204ENST00000460569 NHEJ1Q9H9Q4 299 aaPredicted RBP10.73□□□□□ -0.69
UPF2-204ENST00000460569 ADAMTS1Q9UHI8 967 aa10.73□□□□□ -0.69
UPF2-204ENST00000460569 MAGED2Q9UNF1 606 aaPredicted RBP10.73□□□□□ -0.69
UPF2-204ENST00000460569 A0A087X0T9 212 aa10.72□□□□□ -0.69
UPF2-204ENST00000460569 CCDC195A0A1B0GUA6 201 aa10.72□□□□□ -0.69
UPF2-204ENST00000460569 SOWAHDA6NJG2 315 aa10.72□□□□□ -0.69
UPF2-204ENST00000460569 E5RJQ4 531 aa10.72□□□□□ -0.69
UPF2-204ENST00000460569 TNFRSF10BO14763 440 aa10.72□□□□□ -0.69
UPF2-204ENST00000460569 RTN3O95197 1032 aaPredicted RBP10.72□□□□□ -0.69
UPF2-204ENST00000460569 FAM228BP0C875 321 aa10.72□□□□□ -0.69
UPF2-204ENST00000460569 UNGP13051 313 aaPredicted RBP10.72□□□□□ -0.69
UPF2-204ENST00000460569 LCP1P13796 627 aa10.72□□□□□ -0.69
UPF2-204ENST00000460569 CYLC1P35663 651 aaPredicted RBP10.72□□□□□ -0.69
UPF2-204ENST00000460569 ACADSBP45954 432 aa10.72□□□□□ -0.69
UPF2-204ENST00000460569 TKTL1P51854 596 aa10.72□□□□□ -0.69
UPF2-204ENST00000460569 USP46P62068 366 aa10.72□□□□□ -0.69
UPF2-204ENST00000460569 CENPCQ03188 943 aa10.72□□□□□ -0.69
UPF2-204ENST00000460569 CTC1Q2NKJ3 1217 aa10.72□□□□□ -0.69
UPF2-204ENST00000460569 PTPN20Q4JDL3 420 aa10.72□□□□□ -0.69
UPF2-204ENST00000460569 TMC5Q6UXY8 1006 aa10.72□□□□□ -0.69
UPF2-204ENST00000460569 ERICH1Q86X53 443 aa10.72□□□□□ -0.69
UPF2-204ENST00000460569 TMTC1Q8IUR5 882 aa10.72□□□□□ -0.69
UPF2-204ENST00000460569 WDTC1Q8N5D0 677 aa10.72□□□□□ -0.69
UPF2-204ENST00000460569 CMASQ8NFW8 434 aaPredicted RBP10.72□□□□□ -0.69
UPF2-204ENST00000460569 SCAMP5Q8TAC9 235 aa10.72□□□□□ -0.69
UPF2-204ENST00000460569 STK32AQ8WU08 396 aa10.72□□□□□ -0.69
UPF2-204ENST00000460569 KCTD13Q8WZ19 329 aa10.72□□□□□ -0.69
UPF2-204ENST00000460569 SMG7Q92540 1137 aaKnown RBP10.72□□□□□ -0.69
UPF2-204ENST00000460569 PSMG2Q969U7 264 aa10.72□□□□□ -0.69
UPF2-204ENST00000460569 PPP1R13BQ96KQ4 1090 aa10.72□□□□□ -0.69
UPF2-204ENST00000460569 HSFY1Q96LI6 401 aa10.72□□□□□ -0.69
UPF2-204ENST00000460569 CEP295NLQ96MC4 621 aa10.72□□□□□ -0.69
UPF2-204ENST00000460569 ZNF512Q96ME7 567 aaPredicted RBP10.72□□□□□ -0.69
UPF2-204ENST00000460569 CORO1BQ9BR76 489 aa10.72□□□□□ -0.69
UPF2-204ENST00000460569 C11orf70Q9BRQ4 267 aa10.72□□□□□ -0.69
UPF2-204ENST00000460569 SLC4A5Q9BY07 1137 aa10.72□□□□□ -0.69
UPF2-204ENST00000460569 PRKD2Q9BZL6 878 aa10.72□□□□□ -0.69
UPF2-204ENST00000460569 UBXN6Q9BZV1 441 aa10.72□□□□□ -0.69
UPF2-204ENST00000460569 PIDD1Q9HB75 910 aa10.72□□□□□ -0.69
UPF2-204ENST00000460569 SPTLC3Q9NUV7 552 aa10.72□□□□□ -0.69
UPF2-204ENST00000460569 TAS2R14Q9NYV8 317 aa10.72□□□□□ -0.69
UPF2-204ENST00000460569 TJP2Q9UDY2 1190 aa10.72□□□□□ -0.69
UPF2-204ENST00000460569 ASB3Q9Y575 518 aa10.72□□□□□ -0.69
UPF2-204ENST00000460569 DENND4CQ5VZ89 1909 aa10.72□□□□□ -0.69
UPF2-204ENST00000460569 NRDCO43847 1150 aa10.71□□□□□ -0.69
UPF2-204ENST00000460569 RTN2O75298 545 aa10.71□□□□□ -0.69
UPF2-204ENST00000460569 ERBB2P04626 1255 aa10.71□□□□□ -0.69
UPF2-204ENST00000460569 POU2F2P09086 479 aa10.71□□□□□ -0.69
UPF2-204ENST00000460569 HOXB8P17481 243 aaPredicted RBP10.71□□□□□ -0.69
UPF2-204ENST00000460569 YWHAQP27348 245 aa10.71□□□□□ -0.69
UPF2-204ENST00000460569 SNX16P57768 344 aa10.71□□□□□ -0.69
UPF2-204ENST00000460569 GFPT1Q06210 699 aaPredicted RBP10.71□□□□□ -0.69
UPF2-204ENST00000460569 DLX2Q07687 328 aaPredicted RBP10.71□□□□□ -0.69
UPF2-204ENST00000460569 COL19A1Q14993 1142 aa10.71□□□□□ -0.69
UPF2-204ENST00000460569 SLC18A3Q16572 532 aa10.71□□□□□ -0.69
UPF2-204ENST00000460569 C2CD6Q53TS8 623 aa10.71□□□□□ -0.69
UPF2-204ENST00000460569 RAB41Q5JT25 222 aa10.71□□□□□ -0.69
UPF2-204ENST00000460569 CCDC122Q5T0U0 273 aa10.71□□□□□ -0.69
UPF2-204ENST00000460569 CYP4A22Q5TCH4 519 aa10.71□□□□□ -0.69
UPF2-204ENST00000460569 ACAD10Q6JQN1 1059 aa10.71□□□□□ -0.69
UPF2-204ENST00000460569 PPP1R2P3Q6NXS1 205 aa10.71□□□□□ -0.69
UPF2-204ENST00000460569 SYCE2Q6PIF2 218 aa10.71□□□□□ -0.69
UPF2-204ENST00000460569 MMS22LQ6ZRQ5 1243 aa10.71□□□□□ -0.69
UPF2-204ENST00000460569 MON1BQ7L1V2 547 aa10.71□□□□□ -0.69
UPF2-204ENST00000460569 DENND4AQ7Z401 1863 aa10.71□□□□□ -0.69
UPF2-204ENST00000460569 DNAJB7Q7Z6W7 309 aaPredicted RBP10.71□□□□□ -0.69
UPF2-204ENST00000460569 TMEM139Q8IV31 216 aa10.71□□□□□ -0.69
UPF2-204ENST00000460569 LRRC8AQ8IWT6 810 aa10.71□□□□□ -0.69
UPF2-204ENST00000460569 CCDC112Q8NEF3 446 aa10.71□□□□□ -0.69
UPF2-204ENST00000460569 FEZF2Q8TBJ5 459 aa10.71□□□□□ -0.69
UPF2-204ENST00000460569 FBXO32Q969P5 355 aa10.71□□□□□ -0.69
UPF2-204ENST00000460569 ZNF707Q96C28 371 aaPredicted RBP10.71□□□□□ -0.69
UPF2-204ENST00000460569 TRMT2BQ96GJ1 504 aaKnown RBP10.71□□□□□ -0.69
UPF2-204ENST00000460569 DOCK6Q96HP0 2047 aa10.71□□□□□ -0.69
UPF2-204ENST00000460569 SLITRK1Q96PX8 696 aa10.71□□□□□ -0.69
UPF2-204ENST00000460569 ULBP1Q9BZM6 244 aa10.71□□□□□ -0.69
UPF2-204ENST00000460569 MIS12Q9H081 205 aa10.71□□□□□ -0.69
UPF2-204ENST00000460569 FBXO44Q9H4M3 255 aa10.71□□□□□ -0.69
UPF2-204ENST00000460569 CYLDQ9NQC7 956 aa10.71□□□□□ -0.69
UPF2-204ENST00000460569 ASAH2Q9NR71 780 aa10.71□□□□□ -0.69
UPF2-204ENST00000460569 BRWD1Q9NSI6 2320 aa10.71□□□□□ -0.69
UPF2-204ENST00000460569 HCFC1R1Q9NWW0 138 aa10.71□□□□□ -0.69
UPF2-204ENST00000460569 EHD2Q9NZN4 543 aa10.71□□□□□ -0.69
UPF2-204ENST00000460569 CLEC1BQ9P126 229 aa10.71□□□□□ -0.69
UPF2-204ENST00000460569 UXTQ9UBK9 157 aaPredicted RBP10.71□□□□□ -0.69
UPF2-204ENST00000460569 NAGPAQ9UK23 515 aa10.71□□□□□ -0.69
UPF2-204ENST00000460569 ANAPC1Q9H1A4 1944 aa10.7□□□□□ -0.7
UPF2-204ENST00000460569 GABBR2O75899 941 aa10.7□□□□□ -0.7
UPF2-204ENST00000460569 FBXO21O94952 628 aa10.7□□□□□ -0.7
UPF2-204ENST00000460569 IPO7O95373 1038 aaKnown RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms