RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 TBC1D23Q9NUY8 699 aa4.08□□□□□ -1.76
RFC4-211ENST00000460408 INTS13Q9NVM9 706 aa4.08□□□□□ -1.76
RFC4-211ENST00000460408 SYBUQ9NX95 663 aa4.08□□□□□ -1.76
RFC4-211ENST00000460408 NDRG4Q9ULP0 352 aaKnown RBP4.08□□□□□ -1.76
RFC4-211ENST00000460408 LRCH1Q9Y2L9 728 aa4.08□□□□□ -1.76
RFC4-211ENST00000460408 MRPS17Q9Y2R5 130 aaKnown RBP4.08□□□□□ -1.76
RFC4-211ENST00000460408 FAM234BA2RU67 622 aa4.07□□□□□ -1.76
RFC4-211ENST00000460408 UNC119BA6NIH7 251 aa4.07□□□□□ -1.76
RFC4-211ENST00000460408 F5H697 171 aa4.07□□□□□ -1.76
RFC4-211ENST00000460408 TRIAP1O43715 76 aa4.07□□□□□ -1.76
RFC4-211ENST00000460408 FOSP01100 380 aaPredicted RBP4.07□□□□□ -1.76
RFC4-211ENST00000460408 PPP3CBP16298 524 aa4.07□□□□□ -1.76
RFC4-211ENST00000460408 TYRP1P17643 537 aa4.07□□□□□ -1.76
RFC4-211ENST00000460408 CD6P30203 668 aa4.07□□□□□ -1.76
RFC4-211ENST00000460408 TECP42680 631 aa4.07□□□□□ -1.76
RFC4-211ENST00000460408 HNRNPMP52272 730 aaKnown RBP eCLIP4.07□□□□□ -1.76
RFC4-211ENST00000460408 COPAP53621 1224 aa4.07□□□□□ -1.76
RFC4-211ENST00000460408 KRT17Q04695 432 aa4.07□□□□□ -1.76
RFC4-211ENST00000460408 DHX8Q14562 1220 aaKnown RBP4.07□□□□□ -1.76
RFC4-211ENST00000460408 GORABQ5T7V8 394 aa4.07□□□□□ -1.76
RFC4-211ENST00000460408 ARHGAP40Q5TG30 622 aa4.07□□□□□ -1.76
RFC4-211ENST00000460408 SFRP4Q6FHJ7 346 aaPredicted RBP4.07□□□□□ -1.76
RFC4-211ENST00000460408 MYLK4Q86YV6 388 aaPredicted RBP4.07□□□□□ -1.76
RFC4-211ENST00000460408 SYTL1Q8IYJ3 562 aa4.07□□□□□ -1.76
RFC4-211ENST00000460408 GLIS1Q8NBF1 620 aa4.07□□□□□ -1.76
RFC4-211ENST00000460408 SUPT20HQ8NEM7 779 aa4.07□□□□□ -1.76
RFC4-211ENST00000460408 NELL2Q99435 816 aa4.07□□□□□ -1.76
RFC4-211ENST00000460408 MAGEB5Q9BZ81 275 aa4.07□□□□□ -1.76
RFC4-211ENST00000460408 WDR11Q9BZH6 1224 aa4.07□□□□□ -1.76
RFC4-211ENST00000460408 TRIM5Q9C035 493 aa4.07□□□□□ -1.76
RFC4-211ENST00000460408 AMBRA1Q9C0C7 1298 aa4.07□□□□□ -1.76
RFC4-211ENST00000460408 FAM83DQ9H4H8 585 aa4.07□□□□□ -1.76
RFC4-211ENST00000460408 MYH16Q9H6N6 1097 aa4.07□□□□□ -1.76
RFC4-211ENST00000460408 HEYLQ9NQ87 328 aaPredicted RBP4.07□□□□□ -1.76
RFC4-211ENST00000460408 TM7SF3Q9NS93 570 aa4.07□□□□□ -1.76
RFC4-211ENST00000460408 ZSCAN32Q9NX65 697 aa4.07□□□□□ -1.76
RFC4-211ENST00000460408 RGL1Q9NZL6 768 aa4.07□□□□□ -1.76
RFC4-211ENST00000460408 TRGV11A0A075B6L2 103 aa4.06□□□□□ -1.76
RFC4-211ENST00000460408 AQP7P3A6NL99 342 aa4.06□□□□□ -1.76
RFC4-211ENST00000460408 HNRNPDLO14979 420 aaKnown RBP4.06□□□□□ -1.76
RFC4-211ENST00000460408 PROM1O43490 865 aa4.06□□□□□ -1.76
RFC4-211ENST00000460408 SRGNP10124 158 aa4.06□□□□□ -1.76
RFC4-211ENST00000460408 EGR2P11161 476 aaPredicted RBP4.06□□□□□ -1.76
RFC4-211ENST00000460408 TPH1P17752 444 aa4.06□□□□□ -1.76
RFC4-211ENST00000460408 PDIA3P30101 505 aaKnown RBP4.06□□□□□ -1.76
RFC4-211ENST00000460408 ALDH9A1P49189 494 aa4.06□□□□□ -1.76
RFC4-211ENST00000460408 GUCY1B3Q02153 619 aa4.06□□□□□ -1.76
RFC4-211ENST00000460408 GALNT1Q10472 559 aaPredicted RBP4.06□□□□□ -1.76
RFC4-211ENST00000460408 E2F2Q14209 437 aa4.06□□□□□ -1.76
RFC4-211ENST00000460408 KCNAB1Q14722 419 aa4.06□□□□□ -1.76
RFC4-211ENST00000460408 PTCHD3Q3KNS1 767 aa4.06□□□□□ -1.76
RFC4-211ENST00000460408 PRR16Q569H4 304 aa4.06□□□□□ -1.76
RFC4-211ENST00000460408 ICE2Q659A1 982 aa4.06□□□□□ -1.76
RFC4-211ENST00000460408 RGS7BPQ6MZT1 257 aaPredicted RBP4.06□□□□□ -1.76
RFC4-211ENST00000460408 FBXO42Q6P3S6 717 aa4.06□□□□□ -1.76
RFC4-211ENST00000460408 USP17L6PQ6QN14 398 aa4.06□□□□□ -1.76
RFC4-211ENST00000460408 CRTC1Q6UUV9 634 aa4.06□□□□□ -1.76
RFC4-211ENST00000460408 LNX2Q8N448 690 aa4.06□□□□□ -1.76
RFC4-211ENST00000460408 SLC30A5Q8TAD4 765 aa4.06□□□□□ -1.76
RFC4-211ENST00000460408 SSH3Q8TE77 659 aa4.06□□□□□ -1.76
RFC4-211ENST00000460408 ASB10Q8WXI3 467 aa4.06□□□□□ -1.76
RFC4-211ENST00000460408 LINC00476Q8WZB0 136 aa4.06□□□□□ -1.76
RFC4-211ENST00000460408 LPIN2Q92539 896 aa4.06□□□□□ -1.76
RFC4-211ENST00000460408 PPP2R3CQ969Q6 453 aa4.06□□□□□ -1.76
RFC4-211ENST00000460408 FAM136AQ96C01 138 aa4.06□□□□□ -1.76
RFC4-211ENST00000460408 COQ10AQ96MF6 247 aa4.06□□□□□ -1.76
RFC4-211ENST00000460408 NECTIN3Q9NQS3 549 aa4.06□□□□□ -1.76
RFC4-211ENST00000460408 ANKFY1Q9P2R3 1169 aa4.06□□□□□ -1.76
RFC4-211ENST00000460408 SLC39A10Q9ULF5 831 aa4.06□□□□□ -1.76
RFC4-211ENST00000460408 INSL6Q9Y581 213 aa4.06□□□□□ -1.76
RFC4-211ENST00000460408 EPN1Q9Y6I3 576 aaPredicted RBP4.06□□□□□ -1.76
RFC4-211ENST00000460408 SPATA31A6Q5VVP1 1343 aa4.05□□□□□ -1.76
RFC4-211ENST00000460408 WDR27A2RRH5 827 aa4.05□□□□□ -1.76
RFC4-211ENST00000460408 GOLGA6L3A6NEY3 463 aa4.05□□□□□ -1.76
RFC4-211ENST00000460408 ADM5C9JUS6 153 aa4.05□□□□□ -1.76
RFC4-211ENST00000460408 PODXLO00592 558 aa4.05□□□□□ -1.76
RFC4-211ENST00000460408 CD3EAPO15446 510 aaKnown RBP4.05□□□□□ -1.76
RFC4-211ENST00000460408 FFAR2O15552 330 aa4.05□□□□□ -1.76
RFC4-211ENST00000460408 PIAS2O75928 621 aa4.05□□□□□ -1.76
RFC4-211ENST00000460408 EGR1P18146 543 aa4.05□□□□□ -1.76
RFC4-211ENST00000460408 MST1P26927 711 aa4.05□□□□□ -1.76
RFC4-211ENST00000460408 AVPR1BP47901 424 aa4.05□□□□□ -1.76
RFC4-211ENST00000460408 SATB1Q01826 763 aa4.05□□□□□ -1.76
RFC4-211ENST00000460408 SP2Q02086 613 aa4.05□□□□□ -1.76
RFC4-211ENST00000460408 ICA1Q05084 483 aa4.05□□□□□ -1.76
RFC4-211ENST00000460408 TRIM14Q14142 442 aa4.05□□□□□ -1.76
RFC4-211ENST00000460408 STARD3Q14849 445 aa4.05□□□□□ -1.76
RFC4-211ENST00000460408 PUM3Q15397 648 aaKnown RBP4.05□□□□□ -1.76
RFC4-211ENST00000460408 RAB30Q15771 203 aa4.05□□□□□ -1.76
RFC4-211ENST00000460408 CERCAMQ5T4B2 595 aa4.05□□□□□ -1.76
RFC4-211ENST00000460408 MANEALQ5VSG8 457 aa4.05□□□□□ -1.76
RFC4-211ENST00000460408 CACHD1Q5VU97 1274 aa4.05□□□□□ -1.76
RFC4-211ENST00000460408 VWA1Q6PCB0 445 aa4.05□□□□□ -1.76
RFC4-211ENST00000460408 TSHZ1Q6ZSZ6 1077 aa4.05□□□□□ -1.76
RFC4-211ENST00000460408 USP49Q70CQ1 688 aa4.05□□□□□ -1.76
RFC4-211ENST00000460408 BHLHA9Q7RTU4 235 aa4.05□□□□□ -1.76
RFC4-211ENST00000460408 KRT73Q86Y46 540 aa4.05□□□□□ -1.76
RFC4-211ENST00000460408 CCDC28AQ8IWP9 274 aa4.05□□□□□ -1.76
RFC4-211ENST00000460408 SLC15A3Q8IY34 581 aa4.05□□□□□ -1.76
RFC4-211ENST00000460408 NKAPQ8N5F7 415 aaKnown RBP4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms