RNA–Protein interactions for RNA: ENST00000460235.1

HDAC4-206, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 343 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-206ENST00000460235 DDR2Q16832 855 aa13□□□□□ -0.33
HDAC4-206ENST00000460235 DENND1BQ6P3S1 775 aa13□□□□□ -0.33
HDAC4-206ENST00000460235 H2AFVQ71UI9 128 aa13□□□□□ -0.33
HDAC4-206ENST00000460235 MON1AQ86VX9 555 aa13□□□□□ -0.33
HDAC4-206ENST00000460235 PASD1Q8IV76 773 aa13□□□□□ -0.33
HDAC4-206ENST00000460235 SLC30A5Q8TAD4 765 aa13□□□□□ -0.33
HDAC4-206ENST00000460235 CTNNBL1Q8WYA6 563 aaPredicted RBP13□□□□□ -0.33
HDAC4-206ENST00000460235 PSMG2Q969U7 264 aa13□□□□□ -0.33
HDAC4-206ENST00000460235 TRMT2BQ96GJ1 504 aaKnown RBP13□□□□□ -0.33
HDAC4-206ENST00000460235 EIF3CQ99613 913 aaKnown RBP13□□□□□ -0.33
HDAC4-206ENST00000460235 SMOQ99835 787 aa13□□□□□ -0.33
HDAC4-206ENST00000460235 PRKD2Q9BZL6 878 aa13□□□□□ -0.33
HDAC4-206ENST00000460235 ACP6Q9NPH0 428 aa13□□□□□ -0.33
HDAC4-206ENST00000460235 ASAH2Q9NR71 780 aa13□□□□□ -0.33
HDAC4-206ENST00000460235 TLR8Q9NR97 1041 aaKnown RBP13□□□□□ -0.33
HDAC4-206ENST00000460235 NAGPAQ9UK23 515 aa13□□□□□ -0.33
HDAC4-206ENST00000460235 SCINQ9Y6U3 715 aa13□□□□□ -0.33
HDAC4-206ENST00000460235 MYO9BQ13459 2157 aa13□□□□□ -0.33
HDAC4-206ENST00000460235 CLUHO75153 1309 aa12.99□□□□□ -0.33
HDAC4-206ENST00000460235 SLC38A8A6NNN8 435 aa12.99□□□□□ -0.33
HDAC4-206ENST00000460235 DDX3XO00571 662 aaKnown RBP eCLIP12.99□□□□□ -0.33
HDAC4-206ENST00000460235 NDUFA10O95299 355 aa12.99□□□□□ -0.33
HDAC4-206ENST00000460235 SEC24AO95486 1093 aa12.99□□□□□ -0.33
HDAC4-206ENST00000460235 ZBED1O96006 694 aa12.99□□□□□ -0.33
HDAC4-206ENST00000460235 FTLP02792 175 aaPredicted RBP12.99□□□□□ -0.33
HDAC4-206ENST00000460235 SPATA31D3P0C874 917 aa12.99□□□□□ -0.33
HDAC4-206ENST00000460235 RALAP11233 206 aa12.99□□□□□ -0.33
HDAC4-206ENST00000460235 UNGP13051 313 aaPredicted RBP12.99□□□□□ -0.33
HDAC4-206ENST00000460235 PFKLP17858 780 aa12.99□□□□□ -0.33
HDAC4-206ENST00000460235 MMP8P22894 467 aa12.99□□□□□ -0.33
HDAC4-206ENST00000460235 GABRB2P47870 512 aa12.99□□□□□ -0.33
HDAC4-206ENST00000460235 RPL34P49207 117 aaKnown RBP12.99□□□□□ -0.33
HDAC4-206ENST00000460235 TKTL1P51854 596 aa12.99□□□□□ -0.33
HDAC4-206ENST00000460235 SLC5A3P53794 718 aa12.99□□□□□ -0.33
HDAC4-206ENST00000460235 HYAL1Q12794 435 aa12.99□□□□□ -0.33
HDAC4-206ENST00000460235 ADAM15Q13444 863 aa12.99□□□□□ -0.33
HDAC4-206ENST00000460235 ARHGAP15Q53QZ3 475 aa12.99□□□□□ -0.33
HDAC4-206ENST00000460235 RAB41Q5JT25 222 aa12.99□□□□□ -0.33
HDAC4-206ENST00000460235 ATAT1Q5SQI0 421 aa12.99□□□□□ -0.33
HDAC4-206ENST00000460235 E4F1Q66K89 784 aaPredicted RBP12.99□□□□□ -0.33
HDAC4-206ENST00000460235 LLGL2Q6P1M3 1020 aa12.99□□□□□ -0.33
HDAC4-206ENST00000460235 SPATA31D4Q6ZUB0 917 aa12.99□□□□□ -0.33
HDAC4-206ENST00000460235 DNAJB7Q7Z6W7 309 aaPredicted RBP12.99□□□□□ -0.33
HDAC4-206ENST00000460235 ADGRD2Q7Z7M1 963 aa12.99□□□□□ -0.33
HDAC4-206ENST00000460235 CPA5Q8WXQ8 436 aa12.99□□□□□ -0.33
HDAC4-206ENST00000460235 PABPC5Q96DU9 382 aaKnown RBP12.99□□□□□ -0.33
HDAC4-206ENST00000460235 MYRFLQ96LU7 910 aa12.99□□□□□ -0.33
HDAC4-206ENST00000460235 RIPOR3Q96MK2 946 aa12.99□□□□□ -0.33
HDAC4-206ENST00000460235 FAM161BQ96MY7 647 aa12.99□□□□□ -0.33
HDAC4-206ENST00000460235 KCNK16Q96T55 309 aa12.99□□□□□ -0.33
HDAC4-206ENST00000460235 CHP1Q99653 195 aa12.99□□□□□ -0.33
HDAC4-206ENST00000460235 NCAPGQ9BPX3 1015 aa12.99□□□□□ -0.33
HDAC4-206ENST00000460235 LPIN3Q9BQK8 851 aa12.99□□□□□ -0.33
HDAC4-206ENST00000460235 ZSWIM1Q9BR11 485 aa12.99□□□□□ -0.33
HDAC4-206ENST00000460235 SYT11Q9BT88 431 aa12.99□□□□□ -0.33
HDAC4-206ENST00000460235 ISCUQ9H1K1 167 aa12.99□□□□□ -0.33
HDAC4-206ENST00000460235 PARVAQ9NVD7 372 aa12.99□□□□□ -0.33
HDAC4-206ENST00000460235 ASNSD1Q9NWL6 643 aa12.99□□□□□ -0.33
HDAC4-206ENST00000460235 TRPM5Q9NZQ8 1165 aa12.99□□□□□ -0.33
HDAC4-206ENST00000460235 SCML2Q9UQR0 700 aa12.99□□□□□ -0.33
HDAC4-206ENST00000460235 FAM50BQ9Y247 325 aa12.99□□□□□ -0.33
HDAC4-206ENST00000460235 NCANO14594 1321 aa12.98□□□□□ -0.33
HDAC4-206ENST00000460235 A0A087X0T9 212 aa12.98□□□□□ -0.33
HDAC4-206ENST00000460235 CCDC195A0A1B0GUA6 201 aa12.98□□□□□ -0.33
HDAC4-206ENST00000460235 ZSCAN12O43309 604 aa12.98□□□□□ -0.33
HDAC4-206ENST00000460235 LCA5LO95447 670 aa12.98□□□□□ -0.33
HDAC4-206ENST00000460235 FAM228BP0C875 321 aa12.98□□□□□ -0.33
HDAC4-206ENST00000460235 EPCAMP16422 314 aa12.98□□□□□ -0.33
HDAC4-206ENST00000460235 DDX6P26196 483 aaKnown RBP eCLIP12.98□□□□□ -0.33
HDAC4-206ENST00000460235 MAGEA1P43355 309 aa12.98□□□□□ -0.33
HDAC4-206ENST00000460235 GPC5P78333 572 aa12.98□□□□□ -0.33
HDAC4-206ENST00000460235 GOLGA8FQ08AF8 430 aa12.98□□□□□ -0.33
HDAC4-206ENST00000460235 GOLGA8DPQ0D2H9 430 aa12.98□□□□□ -0.33
HDAC4-206ENST00000460235 IFI16Q16666 785 aaKnown RBP12.98□□□□□ -0.33
HDAC4-206ENST00000460235 HS1BP3Q53T59 392 aa12.98□□□□□ -0.33
HDAC4-206ENST00000460235 OR6B2Q6IFH4 312 aa12.98□□□□□ -0.33
HDAC4-206ENST00000460235 ANKRD54Q6NXT1 300 aa12.98□□□□□ -0.33
HDAC4-206ENST00000460235 PMF1Q6P1K2 205 aa12.98□□□□□ -0.33
HDAC4-206ENST00000460235 EP400NLQ6ZTU2 488 aa12.98□□□□□ -0.33
HDAC4-206ENST00000460235 KIAA1328Q86T90 577 aa12.98□□□□□ -0.33
HDAC4-206ENST00000460235 MICALL1Q8N3F8 863 aa12.98□□□□□ -0.33
HDAC4-206ENST00000460235 VN1R2Q8NFZ6 395 aa12.98□□□□□ -0.33
HDAC4-206ENST00000460235 UBE2Q2Q8WVN8 375 aa12.98□□□□□ -0.33
HDAC4-206ENST00000460235 SMG7Q92540 1137 aaKnown RBP12.98□□□□□ -0.33
HDAC4-206ENST00000460235 MRPS31Q92665 395 aaKnown RBP12.98□□□□□ -0.33
HDAC4-206ENST00000460235 FBXO32Q969P5 355 aa12.98□□□□□ -0.33
HDAC4-206ENST00000460235 NECTIN4Q96NY8 510 aa12.98□□□□□ -0.33
HDAC4-206ENST00000460235 CDX2Q99626 313 aaPredicted RBP12.98□□□□□ -0.33
HDAC4-206ENST00000460235 TTLL2Q9BWV7 592 aa12.98□□□□□ -0.33
HDAC4-206ENST00000460235 TSGA10Q9BZW7 698 aa12.98□□□□□ -0.33
HDAC4-206ENST00000460235 OLA1Q9NTK5 396 aaKnown RBP12.98□□□□□ -0.33
HDAC4-206ENST00000460235 RRN3Q9NYV6 651 aa12.98□□□□□ -0.33
HDAC4-206ENST00000460235 IL37Q9NZH6 218 aa12.98□□□□□ -0.33
HDAC4-206ENST00000460235 MAGED2Q9UNF1 606 aaPredicted RBP12.98□□□□□ -0.33
HDAC4-206ENST00000460235 PCDHGC5Q9Y5F6 944 aa12.98□□□□□ -0.33
HDAC4-206ENST00000460235 CAPN9O14815 690 aa12.97□□□□□ -0.33
HDAC4-206ENST00000460235 HSF2BPO75031 334 aa12.97□□□□□ -0.33
HDAC4-206ENST00000460235 PAPLNO95428 1278 aa12.97□□□□□ -0.33
HDAC4-206ENST00000460235 PLEKP08567 350 aaPredicted RBP12.97□□□□□ -0.33
HDAC4-206ENST00000460235 CCDC175P0C221 793 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms