RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 HHIPL1Q96JK4 782 aa10.13□□□□□ -0.79
UFD1-205ENST00000459854 RMDN3Q96TC7 470 aa10.13□□□□□ -0.79
UFD1-205ENST00000459854 C7orf25Q9BPX7 421 aa10.13□□□□□ -0.79
UFD1-205ENST00000459854 SPATC1LQ9H0A9 340 aa10.13□□□□□ -0.79
UFD1-205ENST00000459854 RNPEPL1Q9HAU8 725 aa10.13□□□□□ -0.79
UFD1-205ENST00000459854 HEY2Q9UBP5 337 aa10.13□□□□□ -0.79
UFD1-205ENST00000459854 KCNH4Q9UQ05 1017 aa10.13□□□□□ -0.79
UFD1-205ENST00000459854 SH3GLB1Q9Y371 365 aa10.13□□□□□ -0.79
UFD1-205ENST00000459854 PI4K2BG5E9Z4 385 aa10.13□□□□□ -0.79
UFD1-205ENST00000459854 VWA5AO00534 786 aa10.13□□□□□ -0.79
UFD1-205ENST00000459854 UBOX5O94941 541 aa10.13□□□□□ -0.79
UFD1-205ENST00000459854 PRR29P0C7W0 189 aa10.13□□□□□ -0.79
UFD1-205ENST00000459854 PEX5P50542 639 aa10.13□□□□□ -0.79
UFD1-205ENST00000459854 SH3D19Q5HYK7 790 aa10.13□□□□□ -0.79
UFD1-205ENST00000459854 TMEM63BQ5T3F8 832 aa10.13□□□□□ -0.79
UFD1-205ENST00000459854 PPP4R4Q6NUP7 873 aa10.13□□□□□ -0.79
UFD1-205ENST00000459854 RASAL3Q86YV0 1011 aa10.13□□□□□ -0.79
UFD1-205ENST00000459854 CEP44Q9C0F1 390 aa10.13□□□□□ -0.79
UFD1-205ENST00000459854 PAIP1Q9H074 479 aaKnown RBP10.13□□□□□ -0.79
UFD1-205ENST00000459854 SMIM22K7EJ46 135 aa10.13□□□□□ -0.79
UFD1-205ENST00000459854 CIITAP33076 1130 aa10.13□□□□□ -0.79
UFD1-205ENST00000459854 SLC29A2Q14542 456 aa10.13□□□□□ -0.79
UFD1-205ENST00000459854 SGSM1Q2NKQ1 1148 aa10.13□□□□□ -0.79
UFD1-205ENST00000459854 RRM2BQ7LG56 351 aa10.13□□□□□ -0.79
UFD1-205ENST00000459854 TAGAPQ8N103 731 aa10.13□□□□□ -0.79
UFD1-205ENST00000459854 MCPH1Q8NEM0 835 aa10.13□□□□□ -0.79
UFD1-205ENST00000459854 LENG1Q96BZ8 264 aaPredicted RBP10.13□□□□□ -0.79
UFD1-205ENST00000459854 AGXT2Q9BYV1 514 aa10.13□□□□□ -0.79
UFD1-205ENST00000459854 UNC45AQ9H3U1 944 aa10.13□□□□□ -0.79
UFD1-205ENST00000459854 HAO1Q9UJM8 370 aa10.13□□□□□ -0.79
UFD1-205ENST00000459854 KLHL20Q9Y2M5 609 aa10.13□□□□□ -0.79
UFD1-205ENST00000459854 FER1L6Q2WGJ9 1857 aa10.13□□□□□ -0.79
UFD1-205ENST00000459854 GLRA3O75311 464 aa10.12□□□□□ -0.79
UFD1-205ENST00000459854 AP1G2O75843 785 aa10.12□□□□□ -0.79
UFD1-205ENST00000459854 SLC10A3P09131 477 aa10.12□□□□□ -0.79
UFD1-205ENST00000459854 VAMP7P51809 220 aa10.12□□□□□ -0.79
UFD1-205ENST00000459854 ACTR2P61160 394 aa10.12□□□□□ -0.79
UFD1-205ENST00000459854 MAPK7Q13164 816 aa10.12□□□□□ -0.79
UFD1-205ENST00000459854 STXBP2Q15833 593 aa10.12□□□□□ -0.79
UFD1-205ENST00000459854 FASTKD1Q53R41 847 aaKnown RBP10.12□□□□□ -0.79
UFD1-205ENST00000459854 C1orf228Q6PIY5 440 aa10.12□□□□□ -0.79
UFD1-205ENST00000459854 ZNF677Q86XU0 584 aa10.12□□□□□ -0.79
UFD1-205ENST00000459854 CCDC60Q8IWA6 550 aaPredicted RBP10.12□□□□□ -0.79
UFD1-205ENST00000459854 RYBPQ8N488 228 aaPredicted RBP10.12□□□□□ -0.79
UFD1-205ENST00000459854 CASKIN2Q8WXE0 1202 aa10.12□□□□□ -0.79
UFD1-205ENST00000459854 TRIM51Q9BSJ1 452 aa10.12□□□□□ -0.79
UFD1-205ENST00000459854 AP5M1Q9H0R1 490 aa10.12□□□□□ -0.79
UFD1-205ENST00000459854 EURLQ9NYK6 297 aa10.12□□□□□ -0.79
UFD1-205ENST00000459854 MROH7Q68CQ1 1323 aa10.12□□□□□ -0.79
UFD1-205ENST00000459854 COL4A1P02462 1669 aa10.12□□□□□ -0.79
UFD1-205ENST00000459854 A0A0A6YYK5 440 aaPredicted RBP10.12□□□□□ -0.79
UFD1-205ENST00000459854 IGKV6D-41A0A0C4DH26 115 aa10.12□□□□□ -0.79
UFD1-205ENST00000459854 AIM2O14862 343 aa10.12□□□□□ -0.79
UFD1-205ENST00000459854 ZNF263O14978 683 aa10.12□□□□□ -0.79
UFD1-205ENST00000459854 NUP62P37198 522 aaPredicted RBP10.12□□□□□ -0.79
UFD1-205ENST00000459854 SKIV2L2P42285 1042 aaKnown RBP10.12□□□□□ -0.79
UFD1-205ENST00000459854 FXR1P51114 621 aaKnown RBP eCLIP10.12□□□□□ -0.79
UFD1-205ENST00000459854 PRKAA2P54646 552 aa10.12□□□□□ -0.79
UFD1-205ENST00000459854 MTTPP55157 894 aa10.12□□□□□ -0.79
UFD1-205ENST00000459854 TOP3AQ13472 1001 aaPredicted RBP10.12□□□□□ -0.79
UFD1-205ENST00000459854 TSC22D1Q15714 1073 aa10.12□□□□□ -0.79
UFD1-205ENST00000459854 ATAD3BQ5T9A4 648 aa10.12□□□□□ -0.79
UFD1-205ENST00000459854 KRT73Q86Y46 540 aa10.12□□□□□ -0.79
UFD1-205ENST00000459854 RTL3Q8N8U3 475 aaKnown RBP10.12□□□□□ -0.79
UFD1-205ENST00000459854 C1orf54Q8WWF1 131 aa10.12□□□□□ -0.79
UFD1-205ENST00000459854 TRIM54Q9BYV2 358 aa10.12□□□□□ -0.79
UFD1-205ENST00000459854 SENP2Q9HC62 589 aa10.12□□□□□ -0.79
UFD1-205ENST00000459854 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.12□□□□□ -0.79
UFD1-205ENST00000459854 ZC3H7BQ9UGR2 993 aaKnown RBP10.12□□□□□ -0.79
UFD1-205ENST00000459854 BTBD19C9JJ37 291 aa10.12□□□□□ -0.79
UFD1-205ENST00000459854 APOL1O14791 398 aa10.12□□□□□ -0.79
UFD1-205ENST00000459854 CYP2C8P10632 490 aa10.12□□□□□ -0.79
UFD1-205ENST00000459854 SDC4P31431 198 aa10.12□□□□□ -0.79
UFD1-205ENST00000459854 COILP38432 576 aaPredicted RBP10.12□□□□□ -0.79
UFD1-205ENST00000459854 RAD23AP54725 363 aa10.12□□□□□ -0.79
UFD1-205ENST00000459854 NR1H2P55055 460 aa10.12□□□□□ -0.79
UFD1-205ENST00000459854 KCNK10P57789 538 aa10.12□□□□□ -0.79
UFD1-205ENST00000459854 EVX2Q03828 476 aa10.12□□□□□ -0.79
UFD1-205ENST00000459854 PIGHQ14442 188 aaPredicted RBP10.12□□□□□ -0.79
UFD1-205ENST00000459854 PKN2Q16513 984 aaKnown RBP10.12□□□□□ -0.79
UFD1-205ENST00000459854 ZNF667Q5HYK9 610 aa10.12□□□□□ -0.79
UFD1-205ENST00000459854 ARMC4Q5T2S8 1044 aa10.12□□□□□ -0.79
UFD1-205ENST00000459854 PPIL6Q8IXY8 311 aa10.12□□□□□ -0.79
UFD1-205ENST00000459854 SLC35G2Q8TBE7 412 aa10.12□□□□□ -0.79
UFD1-205ENST00000459854 ZNF398Q8TD17 642 aa10.12□□□□□ -0.79
UFD1-205ENST00000459854 GLMNQ92990 594 aa10.12□□□□□ -0.79
UFD1-205ENST00000459854 MTERF3Q96E29 417 aa10.12□□□□□ -0.79
UFD1-205ENST00000459854 PGM2Q96G03 612 aa10.12□□□□□ -0.79
UFD1-205ENST00000459854 CHP1Q99653 195 aa10.12□□□□□ -0.79
UFD1-205ENST00000459854 FSD1LQ9BXM9 530 aa10.12□□□□□ -0.79
UFD1-205ENST00000459854 IRX2Q9BZI1 471 aaPredicted RBP10.12□□□□□ -0.79
UFD1-205ENST00000459854 TTC7AQ9ULT0 858 aaPredicted RBP10.12□□□□□ -0.79
UFD1-205ENST00000459854 STAP1Q9ULZ2 295 aa10.12□□□□□ -0.79
UFD1-205ENST00000459854 MAST2Q6P0Q8 1798 aa10.12□□□□□ -0.79
UFD1-205ENST00000459854 CENPXA8MT69 81 aa10.12□□□□□ -0.79
UFD1-205ENST00000459854 ITGBL1O95965 494 aaPredicted RBP10.12□□□□□ -0.79
UFD1-205ENST00000459854 GYPCP04921 128 aa10.12□□□□□ -0.79
UFD1-205ENST00000459854 RPL5P46777 297 aaKnown RBP10.12□□□□□ -0.79
UFD1-205ENST00000459854 TNFAIP2Q03169 654 aa10.12□□□□□ -0.79
UFD1-205ENST00000459854 RIPK1Q13546 671 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms