RNA–Protein interactions for RNA: ENST00000459625.5

HDAC7-217, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 6,414 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-217ENST00000459625 CHN1P15882 459 aa16.59■□□□□ 0.25
HDAC7-217ENST00000459625 KCNJ1P48048 391 aa16.59■□□□□ 0.25
HDAC7-217ENST00000459625 STAT4Q14765 748 aa16.59■□□□□ 0.25
HDAC7-217ENST00000459625 SPATA21Q7Z572 469 aa16.59■□□□□ 0.25
HDAC7-217ENST00000459625 CALR3Q96L12 384 aaKnown RBP16.59■□□□□ 0.25
HDAC7-217ENST00000459625 KLHL1Q9NR64 748 aa16.59■□□□□ 0.25
HDAC7-217ENST00000459625 TK2O00142 265 aa16.59■□□□□ 0.25
HDAC7-217ENST00000459625 GMFGO60234 142 aa16.59■□□□□ 0.25
HDAC7-217ENST00000459625 IGKV5-2P06315 115 aa16.59■□□□□ 0.25
HDAC7-217ENST00000459625 AMPD2Q01433 879 aa16.59■□□□□ 0.25
HDAC7-217ENST00000459625 AKIRIN2Q53H80 203 aa16.59■□□□□ 0.25
HDAC7-217ENST00000459625 CEP68Q76N32 757 aa16.59■□□□□ 0.25
HDAC7-217ENST00000459625 KRT35Q92764 455 aa16.59■□□□□ 0.25
HDAC7-217ENST00000459625 MXRA8Q9BRK3 442 aa16.59■□□□□ 0.25
HDAC7-217ENST00000459625 HPS5Q9UPZ3 1129 aa16.59■□□□□ 0.25
HDAC7-217ENST00000459625 SIK3Q9Y2K2 1263 aa16.59■□□□□ 0.25
HDAC7-217ENST00000459625 PPM1LQ5SGD2 360 aa16.59■□□□□ 0.25
HDAC7-217ENST00000459625 C12orf60Q5U649 245 aa16.59■□□□□ 0.25
HDAC7-217ENST00000459625 MAP1SQ66K74 1059 aaPredicted RBP16.59■□□□□ 0.25
HDAC7-217ENST00000459625 TNIP2Q8NFZ5 429 aa16.59■□□□□ 0.25
HDAC7-217ENST00000459625 RDM1Q8NG50 284 aa16.59■□□□□ 0.25
HDAC7-217ENST00000459625 FBXO28Q9NVF7 368 aa16.59■□□□□ 0.25
HDAC7-217ENST00000459625 SPATA31A3Q5VYP0 1347 aa16.58■□□□□ 0.25
HDAC7-217ENST00000459625 SRSF11Q05519 484 aaKnown RBP16.58■□□□□ 0.25
HDAC7-217ENST00000459625 MTF1Q14872 753 aa16.58■□□□□ 0.25
HDAC7-217ENST00000459625 NECAB2Q7Z6G3 386 aa16.58■□□□□ 0.25
HDAC7-217ENST00000459625 HEATR4Q86WZ0 1026 aa16.58■□□□□ 0.25
HDAC7-217ENST00000459625 CCDC103Q8IW40 242 aa16.58■□□□□ 0.25
HDAC7-217ENST00000459625 NEDD1Q8NHV4 660 aa16.58■□□□□ 0.25
HDAC7-217ENST00000459625 EDEM1Q92611 657 aa16.58■□□□□ 0.25
HDAC7-217ENST00000459625 NLNQ9BYT8 704 aa16.58■□□□□ 0.25
HDAC7-217ENST00000459625 ZNF304Q9HCX3 659 aa16.58■□□□□ 0.25
HDAC7-217ENST00000459625 RNF19AQ9NV58 838 aa16.58■□□□□ 0.25
HDAC7-217ENST00000459625 ERI2A8K979 691 aaKnown RBP16.58■□□□□ 0.25
HDAC7-217ENST00000459625 DLGAP3O95886 979 aa16.58■□□□□ 0.25
HDAC7-217ENST00000459625 CLTBP09497 229 aa16.58■□□□□ 0.25
HDAC7-217ENST00000459625 ANXA11P50995 505 aaKnown RBP16.58■□□□□ 0.25
HDAC7-217ENST00000459625 SKA1Q96BD8 255 aa16.58■□□□□ 0.25
HDAC7-217ENST00000459625 OSMRQ99650 979 aa16.58■□□□□ 0.25
HDAC7-217ENST00000459625 RNF208Q9H0X6 261 aa16.58■□□□□ 0.25
HDAC7-217ENST00000459625 PSMC3IPQ9P2W1 217 aaPredicted RBP16.58■□□□□ 0.25
HDAC7-217ENST00000459625 SAMD9Q5K651 1589 aa16.58■□□□□ 0.25
HDAC7-217ENST00000459625 FAM25AB3EWG3 89 aa16.58■□□□□ 0.24
HDAC7-217ENST00000459625 FAM25CB3EWG5 89 aa16.58■□□□□ 0.24
HDAC7-217ENST00000459625 FAM25GB3EWG6 89 aa16.58■□□□□ 0.24
HDAC7-217ENST00000459625 MT-CO1P00395 513 aa16.58■□□□□ 0.24
HDAC7-217ENST00000459625 PNMA6AP0CW24 399 aaPredicted RBP16.58■□□□□ 0.24
HDAC7-217ENST00000459625 HOXA7P31268 230 aaPredicted RBP16.58■□□□□ 0.24
HDAC7-217ENST00000459625 NUDT2P50583 147 aa16.58■□□□□ 0.24
HDAC7-217ENST00000459625 PLD1Q13393 1074 aa16.58■□□□□ 0.24
HDAC7-217ENST00000459625 FAM83EQ2M2I3 478 aa16.58■□□□□ 0.24
HDAC7-217ENST00000459625 SLC25A24Q6NUK1 477 aa16.58■□□□□ 0.24
HDAC7-217ENST00000459625 GPRC5CQ9NQ84 441 aa16.58■□□□□ 0.24
HDAC7-217ENST00000459625 USP1O94782 785 aa16.58■□□□□ 0.24
HDAC7-217ENST00000459625 LINC00116Q8NCU8 138 aa16.58■□□□□ 0.24
HDAC7-217ENST00000459625 USP7Q93009 1102 aa16.58■□□□□ 0.24
HDAC7-217ENST00000459625 MYOCQ99972 504 aa16.58■□□□□ 0.24
HDAC7-217ENST00000459625 LRRC1Q9BTT6 524 aa16.58■□□□□ 0.24
HDAC7-217ENST00000459625 CEP41Q9BYV8 373 aa16.58■□□□□ 0.24
HDAC7-217ENST00000459625 KCNH7Q9NS40 1196 aa16.58■□□□□ 0.24
HDAC7-217ENST00000459625 MPP6Q9NZW5 540 aa16.58■□□□□ 0.24
HDAC7-217ENST00000459625 PAK5Q9P286 719 aa16.58■□□□□ 0.24
HDAC7-217ENST00000459625 GRID2IPA4D2P6 1211 aa16.58■□□□□ 0.24
HDAC7-217ENST00000459625 KLHL20Q9Y2M5 609 aa16.58■□□□□ 0.24
HDAC7-217ENST00000459625 PHF2O75151 1096 aa16.57■□□□□ 0.24
HDAC7-217ENST00000459625 ERN1O75460 977 aaKnown RBP16.57■□□□□ 0.24
HDAC7-217ENST00000459625 OR6A2O95222 327 aa16.57■□□□□ 0.24
HDAC7-217ENST00000459625 IFNA16P05015 189 aa16.57■□□□□ 0.24
HDAC7-217ENST00000459625 AMD1P17707 334 aa16.57■□□□□ 0.24
HDAC7-217ENST00000459625 DHX34Q14147 1143 aaKnown RBP16.57■□□□□ 0.24
HDAC7-217ENST00000459625 ELMO3Q96BJ8 720 aa16.57■□□□□ 0.24
HDAC7-217ENST00000459625 UBTFL6P0CB48 400 aaPredicted RBP16.57■□□□□ 0.24
HDAC7-217ENST00000459625 ATP6V1B2P21281 511 aa16.57■□□□□ 0.24
HDAC7-217ENST00000459625 NBPF9Q3BBW0 867 aa16.57■□□□□ 0.24
HDAC7-217ENST00000459625 DGKKQ5KSL6 1271 aa16.57■□□□□ 0.24
HDAC7-217ENST00000459625 RBM23Q86U06 439 aaKnown RBP16.57■□□□□ 0.24
HDAC7-217ENST00000459625 EPHX4Q8IUS5 362 aa16.57■□□□□ 0.24
HDAC7-217ENST00000459625 OMDQ99983 421 aa16.57■□□□□ 0.24
HDAC7-217ENST00000459625 THP07101 528 aa16.57■□□□□ 0.24
HDAC7-217ENST00000459625 PYGMP11217 842 aa16.57■□□□□ 0.24
HDAC7-217ENST00000459625 FAM171A1Q5VUB5 890 aa16.57■□□□□ 0.24
HDAC7-217ENST00000459625 COL26A1Q96A83 441 aa16.57■□□□□ 0.24
HDAC7-217ENST00000459625 NSUN4Q96CB9 384 aaKnown RBP16.57■□□□□ 0.24
HDAC7-217ENST00000459625 TPD52L3Q96J77 140 aa16.57■□□□□ 0.24
HDAC7-217ENST00000459625 ZNF333Q96JL9 665 aa16.57■□□□□ 0.24
HDAC7-217ENST00000459625 OVOS2A0A0G2JMS6 1433 aa16.57■□□□□ 0.24
HDAC7-217ENST00000459625 OVOS2A0A0J9YW53 1432 aa16.57■□□□□ 0.24
HDAC7-217ENST00000459625 OVOS2Q6IE36 1432 aa16.57■□□□□ 0.24
HDAC7-217ENST00000459625 PDXKO00764 312 aa16.57■□□□□ 0.24
HDAC7-217ENST00000459625 TRIM25Q14258 630 aaKnown RBP16.57■□□□□ 0.24
HDAC7-217ENST00000459625 DET1Q7L5Y6 550 aa16.57■□□□□ 0.24
HDAC7-217ENST00000459625 CHST13Q8NET6 341 aa16.57■□□□□ 0.24
HDAC7-217ENST00000459625 CELF6Q96J87 481 aaKnown RBP16.57■□□□□ 0.24
HDAC7-217ENST00000459625 ATP6V1G3Q96LB4 118 aa16.57■□□□□ 0.24
HDAC7-217ENST00000459625 SETD4Q9NVD3 440 aa16.57■□□□□ 0.24
HDAC7-217ENST00000459625 NR5A2O00482 541 aa16.57■□□□□ 0.24
HDAC7-217ENST00000459625 KPNA3O00505 521 aaPredicted RBP16.57■□□□□ 0.24
HDAC7-217ENST00000459625 ATP8B1O43520 1251 aa16.57■□□□□ 0.24
HDAC7-217ENST00000459625 ANXA9O76027 345 aa16.57■□□□□ 0.24
HDAC7-217ENST00000459625 KRT16P08779 473 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms