RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 WDR60Q8WVS4 1066 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 MASTLQ96GX5 879 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 APOPT1Q96IL0 206 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 FAM84AQ96KN4 292 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 ARHGEF4Q9NR80 690 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 C2CD2Q9Y426 696 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 PTPRJQ12913 1337 aa8.89□□□□□ -0.99
VPS50-208ENST00000458707 IQANK1A0A1B0GTG1 560 aa8.88□□□□□ -0.99
VPS50-208ENST00000458707 WDR91A4D1P6 747 aa8.88□□□□□ -0.99
VPS50-208ENST00000458707 MAGEA13PA6NCF6 341 aa8.88□□□□□ -0.99
VPS50-208ENST00000458707 F8VP50 259 aa8.88□□□□□ -0.99
VPS50-208ENST00000458707 LPXNO60711 386 aa8.88□□□□□ -0.99
VPS50-208ENST00000458707 LSM8O95777 96 aaKnown RBP8.88□□□□□ -0.99
VPS50-208ENST00000458707 ESRRAP11474 423 aaPredicted RBP8.88□□□□□ -0.99
VPS50-208ENST00000458707 TNNI1P19237 187 aa8.88□□□□□ -0.99
VPS50-208ENST00000458707 CDH5P33151 784 aaPredicted RBP8.88□□□□□ -0.99
VPS50-208ENST00000458707 OGDHQ02218 1023 aa8.88□□□□□ -0.99
VPS50-208ENST00000458707 GAD2Q05329 585 aa8.88□□□□□ -0.99
VPS50-208ENST00000458707 CDK18Q07002 472 aa8.88□□□□□ -0.99
VPS50-208ENST00000458707 GNPTABQ3T906 1256 aa8.88□□□□□ -0.99
VPS50-208ENST00000458707 TXNRD3NBQ6F5E7 133 aa8.88□□□□□ -0.99
VPS50-208ENST00000458707 CCDC62Q6P9F0 684 aa8.88□□□□□ -0.99
VPS50-208ENST00000458707 VPS52Q8N1B4 723 aa8.88□□□□□ -0.99
VPS50-208ENST00000458707 ARHGAP24Q8N264 748 aa8.88□□□□□ -0.99
VPS50-208ENST00000458707 TTC13Q8NBP0 860 aa8.88□□□□□ -0.99
VPS50-208ENST00000458707 PPFIBP2Q8ND30 876 aa8.88□□□□□ -0.99
VPS50-208ENST00000458707 FBXO36Q8NEA4 188 aa8.88□□□□□ -0.99
VPS50-208ENST00000458707 B4GALNT2Q8NHY0 566 aa8.88□□□□□ -0.99
VPS50-208ENST00000458707 ZNF606Q8WXB4 792 aa8.88□□□□□ -0.99
VPS50-208ENST00000458707 MCUR1Q96AQ8 359 aa8.88□□□□□ -0.99
VPS50-208ENST00000458707 MRRFQ96E11 262 aaKnown RBP8.88□□□□□ -0.99
VPS50-208ENST00000458707 PRR11Q96HE9 360 aaPredicted RBP8.88□□□□□ -0.99
VPS50-208ENST00000458707 OXNAD1Q96HP4 312 aaPredicted RBP8.88□□□□□ -0.99
VPS50-208ENST00000458707 NR1H4Q96RI1 486 aaPredicted RBP8.88□□□□□ -0.99
VPS50-208ENST00000458707 CAMKK2Q96RR4 588 aa8.88□□□□□ -0.99
VPS50-208ENST00000458707 FNBP1Q96RU3 617 aa8.88□□□□□ -0.99
VPS50-208ENST00000458707 CYTH2Q99418 400 aa8.88□□□□□ -0.99
VPS50-208ENST00000458707 ZNF184Q99676 751 aaPredicted RBP8.88□□□□□ -0.99
VPS50-208ENST00000458707 ADAM33Q9BZ11 813 aa8.88□□□□□ -0.99
VPS50-208ENST00000458707 FAM192AQ9GZU8 254 aa8.88□□□□□ -0.99
VPS50-208ENST00000458707 XPNPEP1Q9NQW7 623 aa8.88□□□□□ -0.99
VPS50-208ENST00000458707 FBXO6Q9NRD1 293 aaPredicted RBP8.88□□□□□ -0.99
VPS50-208ENST00000458707 KRT82Q9NSB4 513 aa8.88□□□□□ -0.99
VPS50-208ENST00000458707 DNAJB4Q9UDY4 337 aa8.88□□□□□ -0.99
VPS50-208ENST00000458707 STRIP2Q9ULQ0 834 aa8.88□□□□□ -0.99
VPS50-208ENST00000458707 LOC285556D6RIA3 1793 aa8.88□□□□□ -0.99
VPS50-208ENST00000458707 TRIP11Q15643 1979 aa8.88□□□□□ -0.99
VPS50-208ENST00000458707 CAPN14A8MX76 684 aa8.87□□□□□ -0.99
VPS50-208ENST00000458707 GOLGA8SH3BPF8 625 aa8.87□□□□□ -0.99
VPS50-208ENST00000458707 GOLGA8MH3BSY2 632 aa8.87□□□□□ -0.99
VPS50-208ENST00000458707 FCHO1O14526 889 aa8.87□□□□□ -0.99
VPS50-208ENST00000458707 DGAT1O75907 488 aa8.87□□□□□ -0.99
VPS50-208ENST00000458707 IFNB1P01574 187 aa8.87□□□□□ -0.99
VPS50-208ENST00000458707 PIGRP01833 764 aa8.87□□□□□ -0.99
VPS50-208ENST00000458707 RPL22P35268 128 aaKnown RBP8.87□□□□□ -0.99
VPS50-208ENST00000458707 GDF10P55107 478 aa8.87□□□□□ -0.99
VPS50-208ENST00000458707 SESN3P58005 492 aa8.87□□□□□ -0.99
VPS50-208ENST00000458707 NLRP11P59045 1033 aaKnown RBP8.87□□□□□ -0.99
VPS50-208ENST00000458707 RNF220Q5VTB9 566 aa8.87□□□□□ -0.99
VPS50-208ENST00000458707 FOXB2Q5VYV0 432 aa8.87□□□□□ -0.99
VPS50-208ENST00000458707 LMBRD2Q68DH5 695 aaPredicted RBP8.87□□□□□ -0.99
VPS50-208ENST00000458707 BBS12Q6ZW61 710 aa8.87□□□□□ -0.99
VPS50-208ENST00000458707 NET1Q7Z628 596 aaPredicted RBP8.87□□□□□ -0.99
VPS50-208ENST00000458707 SESTD1Q86VW0 696 aa8.87□□□□□ -0.99
VPS50-208ENST00000458707 RHPN2Q8IUC4 686 aa8.87□□□□□ -0.99
VPS50-208ENST00000458707 PALM2Q8IXS6 379 aa8.87□□□□□ -0.99
VPS50-208ENST00000458707 PHC3Q8NDX5 983 aa8.87□□□□□ -0.99
VPS50-208ENST00000458707 ACTL9Q8TC94 416 aa8.87□□□□□ -0.99
VPS50-208ENST00000458707 FAM151AQ8WW52 585 aa8.87□□□□□ -0.99
VPS50-208ENST00000458707 SLC44A1Q8WWI5 657 aa8.87□□□□□ -0.99
VPS50-208ENST00000458707 STMN2Q93045 179 aa8.87□□□□□ -0.99
VPS50-208ENST00000458707 MCEEQ96PE7 176 aa8.87□□□□□ -0.99
VPS50-208ENST00000458707 TAAR1Q96RJ0 339 aa8.87□□□□□ -0.99
VPS50-208ENST00000458707 CGRRF1Q99675 332 aa8.87□□□□□ -0.99
VPS50-208ENST00000458707 CCDC28BQ9BUN5 200 aa8.87□□□□□ -0.99
VPS50-208ENST00000458707 ZNF518BQ9C0D4 1074 aa8.87□□□□□ -0.99
VPS50-208ENST00000458707 C12orf65Q9H3J6 166 aaKnown RBP8.87□□□□□ -0.99
VPS50-208ENST00000458707 PIDD1Q9HB75 910 aa8.87□□□□□ -0.99
VPS50-208ENST00000458707 KCNK4Q9NYG8 393 aa8.87□□□□□ -0.99
VPS50-208ENST00000458707 PDP2Q9P2J9 529 aa8.87□□□□□ -0.99
VPS50-208ENST00000458707 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.87□□□□□ -0.99
VPS50-208ENST00000458707 TMEM98Q9Y2Y6 226 aa8.87□□□□□ -0.99
VPS50-208ENST00000458707 PPME1Q9Y570 386 aa8.87□□□□□ -0.99
VPS50-208ENST00000458707 PCDHA10Q9Y5I2 948 aa8.87□□□□□ -0.99
VPS50-208ENST00000458707 ZNF541Q9H0D2 1346 aa8.87□□□□□ -0.99
VPS50-208ENST00000458707 CNTNAP1P78357 1384 aa8.87□□□□□ -0.99
VPS50-208ENST00000458707 GOLGA8RI6L899 631 aa8.87□□□□□ -0.99
VPS50-208ENST00000458707 MAP3K7O43318 606 aa8.87□□□□□ -0.99
VPS50-208ENST00000458707 ZNF862O60290 1169 aa8.87□□□□□ -0.99
VPS50-208ENST00000458707 DKC1O60832 514 aaKnown RBP eCLIP8.87□□□□□ -0.99
VPS50-208ENST00000458707 TMEM63AO94886 807 aa8.87□□□□□ -0.99
VPS50-208ENST00000458707 MT-ND3P03897 115 aa8.87□□□□□ -0.99
VPS50-208ENST00000458707 ATP5BP06576 529 aaKnown RBP8.87□□□□□ -0.99
VPS50-208ENST00000458707 VDRP11473 427 aa8.87□□□□□ -0.99
VPS50-208ENST00000458707 KCNA3P22001 575 aa8.87□□□□□ -0.99
VPS50-208ENST00000458707 SSTR3P32745 418 aaPredicted RBP8.87□□□□□ -0.99
VPS50-208ENST00000458707 GJA8P48165 433 aa8.87□□□□□ -0.99
VPS50-208ENST00000458707 LIG4P49917 911 aa8.87□□□□□ -0.99
VPS50-208ENST00000458707 CACNA2D1P54289 1103 aa8.87□□□□□ -0.99
VPS50-208ENST00000458707 SOX10P56693 466 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms