RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 TMEM120AQ9BXJ8 343 aa14.78□□□□□ -0.04
SCFD1-203ENST00000458591 RLFQ13129 1914 aa14.78□□□□□ -0.04
SCFD1-203ENST00000458591 INO80B-WBP1J3KQ70 363 aa14.77□□□□□ -0.04
SCFD1-203ENST00000458591 TRUB2O95900 331 aaKnown RBP14.77□□□□□ -0.04
SCFD1-203ENST00000458591 TOP3BO95985 862 aaKnown RBP14.77□□□□□ -0.04
SCFD1-203ENST00000458591 PDHA1P08559 390 aa14.77□□□□□ -0.04
SCFD1-203ENST00000458591 NEFHP12036 1026 aa14.77□□□□□ -0.04
SCFD1-203ENST00000458591 PTPN4P29074 926 aa14.77□□□□□ -0.04
SCFD1-203ENST00000458591 ZNF280AP59817 542 aaPredicted RBP14.77□□□□□ -0.04
SCFD1-203ENST00000458591 YWHAEP62258 255 aaKnown RBP14.77□□□□□ -0.04
SCFD1-203ENST00000458591 BMPR2Q13873 1038 aa14.77□□□□□ -0.04
SCFD1-203ENST00000458591 ANGEL2Q5VTE6 544 aaKnown RBP14.77□□□□□ -0.04
SCFD1-203ENST00000458591 APBB1IPQ7Z5R6 666 aaPredicted RBP14.77□□□□□ -0.04
SCFD1-203ENST00000458591 PDIK1LQ8N165 341 aa14.77□□□□□ -0.04
SCFD1-203ENST00000458591 SLC4A11Q8NBS3 891 aa14.77□□□□□ -0.04
SCFD1-203ENST00000458591 SPDL1Q96EA4 605 aa14.77□□□□□ -0.04
SCFD1-203ENST00000458591 INO80BQ9C086 356 aaPredicted RBP14.77□□□□□ -0.04
SCFD1-203ENST00000458591 NRBP2Q9NSY0 501 aa14.77□□□□□ -0.04
SCFD1-203ENST00000458591 BTBD7Q9P203 1132 aa14.77□□□□□ -0.04
SCFD1-203ENST00000458591 USP18Q9UMW8 372 aa14.77□□□□□ -0.04
SCFD1-203ENST00000458591 NR2E3Q9Y5X4 410 aa14.77□□□□□ -0.04
SCFD1-203ENST00000458591 CCDC195A0A1B0GUA6 201 aa14.77□□□□□ -0.05
SCFD1-203ENST00000458591 F5H423 210 aaPredicted RBP14.77□□□□□ -0.05
SCFD1-203ENST00000458591 MICAL2O94851 1124 aa14.77□□□□□ -0.05
SCFD1-203ENST00000458591 HMGB2P26583 209 aaKnown RBP14.77□□□□□ -0.05
SCFD1-203ENST00000458591 ETV4P43268 484 aa14.77□□□□□ -0.05
SCFD1-203ENST00000458591 PTDSS1P48651 473 aaKnown RBP14.77□□□□□ -0.05
SCFD1-203ENST00000458591 TUBP50607 506 aa14.77□□□□□ -0.05
SCFD1-203ENST00000458591 CDH6P55285 790 aa14.77□□□□□ -0.05
SCFD1-203ENST00000458591 SMAD1Q15797 465 aaKnown RBP14.77□□□□□ -0.05
SCFD1-203ENST00000458591 HADHQ16836 314 aaKnown RBP14.77□□□□□ -0.05
SCFD1-203ENST00000458591 FYB2Q5VWT5 728 aa14.77□□□□□ -0.05
SCFD1-203ENST00000458591 ZPBP2Q6X784 338 aa14.77□□□□□ -0.05
SCFD1-203ENST00000458591 POLNQ7Z5Q5 900 aa14.77□□□□□ -0.05
SCFD1-203ENST00000458591 PCGF5Q86SE9 256 aa14.77□□□□□ -0.05
SCFD1-203ENST00000458591 ALYREFQ86V81 257 aaKnown RBP14.77□□□□□ -0.05
SCFD1-203ENST00000458591 FBXO27Q8NI29 283 aa14.77□□□□□ -0.05
SCFD1-203ENST00000458591 ZNF518BQ9C0D4 1074 aa14.77□□□□□ -0.05
SCFD1-203ENST00000458591 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.77□□□□□ -0.05
SCFD1-203ENST00000458591 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.77□□□□□ -0.05
SCFD1-203ENST00000458591 ZBTB42B2RXF5 422 aa14.76□□□□□ -0.05
SCFD1-203ENST00000458591 M0QYV0 167 aa14.76□□□□□ -0.05
SCFD1-203ENST00000458591 CYB561D2O14569 222 aa14.76□□□□□ -0.05
SCFD1-203ENST00000458591 KRT7P08729 469 aa14.76□□□□□ -0.05
SCFD1-203ENST00000458591 ICAM3P32942 547 aa14.76□□□□□ -0.05
SCFD1-203ENST00000458591 ARFIP2P53365 341 aa14.76□□□□□ -0.05
SCFD1-203ENST00000458591 OAZ1P54368 228 aa14.76□□□□□ -0.05
SCFD1-203ENST00000458591 KLHL38Q2WGJ6 581 aa14.76□□□□□ -0.05
SCFD1-203ENST00000458591 ZC3H12AQ5D1E8 599 aaKnown RBP14.76□□□□□ -0.05
SCFD1-203ENST00000458591 FAM102AQ5T9C2 384 aaPredicted RBP14.76□□□□□ -0.05
SCFD1-203ENST00000458591 MAP1SQ66K74 1059 aaPredicted RBP14.76□□□□□ -0.05
SCFD1-203ENST00000458591 CAPRIN2Q6IMN6 1127 aaKnown RBP14.76□□□□□ -0.05
SCFD1-203ENST00000458591 SH2D5Q6ZV89 423 aa14.76□□□□□ -0.05
SCFD1-203ENST00000458591 CYP4V2Q6ZWL3 525 aaPredicted RBP14.76□□□□□ -0.05
SCFD1-203ENST00000458591 CTAGE3PQ8IX95 158 aa14.76□□□□□ -0.05
SCFD1-203ENST00000458591 PPM1NQ8N819 430 aa14.76□□□□□ -0.05
SCFD1-203ENST00000458591 C1orf127Q8N9H9 656 aa14.76□□□□□ -0.05
SCFD1-203ENST00000458591 COPS5Q92905 334 aa14.76□□□□□ -0.05
SCFD1-203ENST00000458591 PLAC1Q9HBJ0 212 aa14.76□□□□□ -0.05
SCFD1-203ENST00000458591 AS3MTQ9HBK9 375 aa14.76□□□□□ -0.05
SCFD1-203ENST00000458591 SMYD2Q9NRG4 433 aa14.76□□□□□ -0.05
SCFD1-203ENST00000458591 E7ENQ6 273 aa14.76□□□□□ -0.05
SCFD1-203ENST00000458591 H7C0C1 242 aa14.76□□□□□ -0.05
SCFD1-203ENST00000458591 APOC4-APOC2K7ER74 178 aa14.76□□□□□ -0.05
SCFD1-203ENST00000458591 SMNDC1O75940 238 aaKnown RBP eCLIP14.76□□□□□ -0.05
SCFD1-203ENST00000458591 KRT36O76013 467 aa14.76□□□□□ -0.05
SCFD1-203ENST00000458591 APOC2P02655 101 aa14.76□□□□□ -0.05
SCFD1-203ENST00000458591 ITGB3P05106 788 aa14.76□□□□□ -0.05
SCFD1-203ENST00000458591 TROVE2P10155 538 aaKnown RBP eCLIP14.76□□□□□ -0.05
SCFD1-203ENST00000458591 CYP3A5P20815 502 aa14.76□□□□□ -0.05
SCFD1-203ENST00000458591 CALRP27797 417 aaKnown RBP14.76□□□□□ -0.05
SCFD1-203ENST00000458591 GCKP35557 465 aa14.76□□□□□ -0.05
SCFD1-203ENST00000458591 RFC5P40937 340 aa14.76□□□□□ -0.05
SCFD1-203ENST00000458591 ATP5OP48047 213 aa14.76□□□□□ -0.05
SCFD1-203ENST00000458591 RGS7P49802 495 aa14.76□□□□□ -0.05
SCFD1-203ENST00000458591 CLCN3P51790 818 aa14.76□□□□□ -0.05
SCFD1-203ENST00000458591 IRX1P78414 480 aaPredicted RBP14.76□□□□□ -0.05
SCFD1-203ENST00000458591 TAP1Q03518 808 aa14.76□□□□□ -0.05
SCFD1-203ENST00000458591 TAZQ16635 292 aa14.76□□□□□ -0.05
SCFD1-203ENST00000458591 HSF5Q4G112 596 aaPredicted RBP14.76□□□□□ -0.05
SCFD1-203ENST00000458591 DTX3LQ8TDB6 740 aa14.76□□□□□ -0.05
SCFD1-203ENST00000458591 WDR60Q8WVS4 1066 aa14.76□□□□□ -0.05
SCFD1-203ENST00000458591 FAF2Q96CS3 445 aa14.76□□□□□ -0.05
SCFD1-203ENST00000458591 PTCD3Q96EY7 689 aaKnown RBP14.76□□□□□ -0.05
SCFD1-203ENST00000458591 HEY1Q9Y5J3 304 aa14.76□□□□□ -0.05
SCFD1-203ENST00000458591 GPR25O00155 361 aa14.75□□□□□ -0.05
SCFD1-203ENST00000458591 NFKBIEO00221 500 aa14.75□□□□□ -0.05
SCFD1-203ENST00000458591 MCF2LO15068 1137 aa14.75□□□□□ -0.05
SCFD1-203ENST00000458591 HAUS5O94927 633 aa14.75□□□□□ -0.05
SCFD1-203ENST00000458591 PGK2P07205 417 aa14.75□□□□□ -0.05
SCFD1-203ENST00000458591 KITP10721 976 aa14.75□□□□□ -0.05
SCFD1-203ENST00000458591 ABCD1P33897 745 aa14.75□□□□□ -0.05
SCFD1-203ENST00000458591 RASSF2P50749 326 aa14.75□□□□□ -0.05
SCFD1-203ENST00000458591 NEK3P51956 506 aa14.75□□□□□ -0.05
SCFD1-203ENST00000458591 KPNB1Q14974 876 aaKnown RBP14.75□□□□□ -0.05
SCFD1-203ENST00000458591 PRKD1Q15139 912 aaPredicted RBP14.75□□□□□ -0.05
SCFD1-203ENST00000458591 RASA2Q15283 850 aa14.75□□□□□ -0.05
SCFD1-203ENST00000458591 ANO7Q6IWH7 933 aa14.75□□□□□ -0.05
SCFD1-203ENST00000458591 PPP1R2P3Q6NXS1 205 aa14.75□□□□□ -0.05
SCFD1-203ENST00000458591 SCYL2Q6P3W7 929 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms