RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 DHX58Q96C10 678 aa22.93■■□□□ 1.26
CPNE1-220ENST00000458038 MRPL45Q9BRJ2 306 aaKnown RBP22.93■■□□□ 1.26
CPNE1-220ENST00000458038 LSM14BQ9BX40 385 aaKnown RBP22.93■■□□□ 1.26
CPNE1-220ENST00000458038 TBC1D14Q9P2M4 693 aa22.93■■□□□ 1.26
CPNE1-220ENST00000458038 ANGPTL2Q9UKU9 493 aa22.93■■□□□ 1.26
CPNE1-220ENST00000458038 MMP17Q9ULZ9 603 aa22.93■■□□□ 1.26
CPNE1-220ENST00000458038 MYO18AQ92614 2054 aaKnown RBP22.93■■□□□ 1.26
CPNE1-220ENST00000458038 MYOFQ9NZM1 2061 aa22.93■■□□□ 1.26
CPNE1-220ENST00000458038 RTN3O95197 1032 aaPredicted RBP22.92■■□□□ 1.26
CPNE1-220ENST00000458038 CAVIN2O95810 425 aa22.92■■□□□ 1.26
CPNE1-220ENST00000458038 ZXDBP98169 803 aa22.92■■□□□ 1.26
CPNE1-220ENST00000458038 RNF43Q68DV7 783 aa22.92■■□□□ 1.26
CPNE1-220ENST00000458038 UNC13DQ70J99 1090 aa22.92■■□□□ 1.26
CPNE1-220ENST00000458038 RASSF3Q86WH2 238 aa22.92■■□□□ 1.26
CPNE1-220ENST00000458038 C12orf56Q8IXR9 622 aa22.92■■□□□ 1.26
CPNE1-220ENST00000458038 CCDC127Q96BQ5 260 aa22.92■■□□□ 1.26
CPNE1-220ENST00000458038 CHAMP1Q96JM3 812 aa22.92■■□□□ 1.26
CPNE1-220ENST00000458038 RNF38Q9H0F5 515 aa22.92■■□□□ 1.26
CPNE1-220ENST00000458038 RXFP3Q9NSD7 469 aa22.92■■□□□ 1.26
CPNE1-220ENST00000458038 USP24Q9UPU5 2620 aa22.91■■□□□ 1.26
CPNE1-220ENST00000458038 ALDH1A2O94788 518 aa22.91■■□□□ 1.26
CPNE1-220ENST00000458038 OAS1P00973 400 aaKnown RBP22.91■■□□□ 1.26
CPNE1-220ENST00000458038 GBP1P32455 592 aa22.91■■□□□ 1.26
CPNE1-220ENST00000458038 CYP2J2P51589 502 aa22.91■■□□□ 1.26
CPNE1-220ENST00000458038 AP3M2P53677 418 aa22.91■■□□□ 1.26
CPNE1-220ENST00000458038 SHC2P98077 582 aa22.91■■□□□ 1.26
CPNE1-220ENST00000458038 CREB5Q02930 508 aa22.91■■□□□ 1.26
CPNE1-220ENST00000458038 EHHADHQ08426 723 aa22.91■■□□□ 1.26
CPNE1-220ENST00000458038 TAF10Q12962 218 aa22.91■■□□□ 1.26
CPNE1-220ENST00000458038 C2orf27AQ580R0 203 aa22.91■■□□□ 1.26
CPNE1-220ENST00000458038 FILIP1Q7Z7B0 1213 aa22.91■■□□□ 1.26
CPNE1-220ENST00000458038 B3GALNT2Q8NCR0 500 aa22.91■■□□□ 1.26
CPNE1-220ENST00000458038 OTUB2Q96DC9 234 aa22.91■■□□□ 1.26
CPNE1-220ENST00000458038 CNOT6LQ96LI5 555 aaKnown RBP22.91■■□□□ 1.26
CPNE1-220ENST00000458038 PNKPQ96T60 521 aa22.91■■□□□ 1.26
CPNE1-220ENST00000458038 CPQQ9Y646 472 aa22.91■■□□□ 1.26
CPNE1-220ENST00000458038 ATP8B3O60423 1300 aa22.9■■□□□ 1.26
CPNE1-220ENST00000458038 A0A0A0MRY4 1105 aa22.9■■□□□ 1.26
CPNE1-220ENST00000458038 PVALEFA0A1B0GWK0 134 aa22.9■■□□□ 1.26
CPNE1-220ENST00000458038 A8MXQ7 604 aa22.9■■□□□ 1.26
CPNE1-220ENST00000458038 K7ELQ4 463 aaPredicted RBP22.9■■□□□ 1.26
CPNE1-220ENST00000458038 DCLK1O15075 740 aa22.9■■□□□ 1.26
CPNE1-220ENST00000458038 CLIC2O15247 247 aa22.9■■□□□ 1.26
CPNE1-220ENST00000458038 ADH1CP00326 375 aa22.9■■□□□ 1.26
CPNE1-220ENST00000458038 ABL1P00519 1130 aa22.9■■□□□ 1.26
CPNE1-220ENST00000458038 CYP17A1P05093 508 aa22.9■■□□□ 1.26
CPNE1-220ENST00000458038 KCNA4P22459 653 aa22.9■■□□□ 1.26
CPNE1-220ENST00000458038 YWHAQP27348 245 aa22.9■■□□□ 1.26
CPNE1-220ENST00000458038 DHCR24Q15392 516 aa22.9■■□□□ 1.26
CPNE1-220ENST00000458038 CRY1Q16526 586 aa22.9■■□□□ 1.26
CPNE1-220ENST00000458038 ST3GAL2Q16842 350 aa22.9■■□□□ 1.26
CPNE1-220ENST00000458038 GAB4Q2WGN9 574 aa22.9■■□□□ 1.26
CPNE1-220ENST00000458038 N4BP2L1Q5TBK1 243 aaPredicted RBP22.9■■□□□ 1.26
CPNE1-220ENST00000458038 PMS2CLQ68D20 193 aa22.9■■□□□ 1.26
CPNE1-220ENST00000458038 NUP93Q8N1F7 819 aa22.9■■□□□ 1.26
CPNE1-220ENST00000458038 GOLGA5Q8TBA6 731 aa22.9■■□□□ 1.26
CPNE1-220ENST00000458038 SCFD1Q8WVM8 642 aa22.9■■□□□ 1.26
CPNE1-220ENST00000458038 VRTNQ9H8Y1 702 aa22.9■■□□□ 1.26
CPNE1-220ENST00000458038 TFIP11Q9UBB9 837 aaKnown RBP22.9■■□□□ 1.26
CPNE1-220ENST00000458038 GON4LQ3T8J9 2241 aa22.9■■□□□ 1.26
CPNE1-220ENST00000458038 E2F8A0AVK6 867 aa22.89■■□□□ 1.25
CPNE1-220ENST00000458038 PMLP29590 882 aa22.89■■□□□ 1.25
CPNE1-220ENST00000458038 BMT2Q1RMZ1 405 aa22.89■■□□□ 1.25
CPNE1-220ENST00000458038 PREPLQ4J6C6 727 aaPredicted RBP22.89■■□□□ 1.25
CPNE1-220ENST00000458038 TNIP3Q96KP6 325 aa22.89■■□□□ 1.25
CPNE1-220ENST00000458038 XYLT2Q9H1B5 865 aa22.89■■□□□ 1.25
CPNE1-220ENST00000458038 SMOC1Q9H4F8 434 aa22.89■■□□□ 1.25
CPNE1-220ENST00000458038 COMMD8Q9NX08 183 aa22.89■■□□□ 1.25
CPNE1-220ENST00000458038 PALM2-AKAP2B1ALY0 433 aaPredicted RBP22.88■■□□□ 1.25
CPNE1-220ENST00000458038 PHACTR2O75167 634 aa22.88■■□□□ 1.25
CPNE1-220ENST00000458038 KCNK5O95279 499 aa22.88■■□□□ 1.25
CPNE1-220ENST00000458038 APODP05090 189 aa22.88■■□□□ 1.25
CPNE1-220ENST00000458038 MBL2P11226 248 aaPredicted RBP22.88■■□□□ 1.25
CPNE1-220ENST00000458038 TNFRSF4P43489 277 aa22.88■■□□□ 1.25
CPNE1-220ENST00000458038 SEC13P55735 322 aa22.88■■□□□ 1.25
CPNE1-220ENST00000458038 MYL6P60660 151 aa22.88■■□□□ 1.25
CPNE1-220ENST00000458038 KNOP1Q1ED39 458 aaKnown RBP22.88■■□□□ 1.25
CPNE1-220ENST00000458038 SNX30Q5VWJ9 437 aa22.88■■□□□ 1.25
CPNE1-220ENST00000458038 DAB2IPQ5VWQ8 1189 aa22.88■■□□□ 1.25
CPNE1-220ENST00000458038 SHC4Q6S5L8 630 aa22.88■■□□□ 1.25
CPNE1-220ENST00000458038 NELFCDQ8IXH7 590 aa22.88■■□□□ 1.25
CPNE1-220ENST00000458038 ZNF516Q92618 1163 aa22.88■■□□□ 1.25
CPNE1-220ENST00000458038 DUSP9Q99956 384 aaKnown RBP22.88■■□□□ 1.25
CPNE1-220ENST00000458038 EDEM2Q9BV94 578 aa22.88■■□□□ 1.25
CPNE1-220ENST00000458038 B3GNT5Q9BYG0 378 aa22.88■■□□□ 1.25
CPNE1-220ENST00000458038 ZNF518BQ9C0D4 1074 aa22.88■■□□□ 1.25
CPNE1-220ENST00000458038 SMPD4Q9NXE4 827 aa22.88■■□□□ 1.25
CPNE1-220ENST00000458038 CFAP97Q9P2B7 532 aa22.88■■□□□ 1.25
CPNE1-220ENST00000458038 NXF1Q9UBU9 619 aaKnown RBP22.88■■□□□ 1.25
CPNE1-220ENST00000458038 MYH10P35580 1976 aa22.87■■□□□ 1.25
CPNE1-220ENST00000458038 PI4KAP42356 2102 aa22.87■■□□□ 1.25
CPNE1-220ENST00000458038 KHNYNO15037 678 aaKnown RBP22.87■■□□□ 1.25
CPNE1-220ENST00000458038 POLR2DO15514 142 aaKnown RBP22.87■■□□□ 1.25
CPNE1-220ENST00000458038 EXOC3O60645 756 aa22.87■■□□□ 1.25
CPNE1-220ENST00000458038 KRT37O76014 449 aa22.87■■□□□ 1.25
CPNE1-220ENST00000458038 KAT7O95251 611 aa22.87■■□□□ 1.25
CPNE1-220ENST00000458038 GRIA2P42262 883 aa22.87■■□□□ 1.25
CPNE1-220ENST00000458038 TUBP50607 506 aa22.87■■□□□ 1.25
CPNE1-220ENST00000458038 BYSLQ13895 437 aaKnown RBP22.87■■□□□ 1.25
CPNE1-220ENST00000458038 ANO7Q6IWH7 933 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms