RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 HEBP1Q9NRV9 189 aa24.53■■□□□ 1.52
CBX3-204ENST00000456948 GREB1Q4ZG55 1949 aa24.53■■□□□ 1.52
CBX3-204ENST00000456948 ZNF840PA6NDX5 716 aa24.52■■□□□ 1.52
CBX3-204ENST00000456948 TADA3O75528 432 aa24.52■■□□□ 1.52
CBX3-204ENST00000456948 PRAMEF12O95522 483 aa24.52■■□□□ 1.52
CBX3-204ENST00000456948 PRKCSHP14314 528 aaPredicted RBP24.52■■□□□ 1.52
CBX3-204ENST00000456948 SLC5A3P53794 718 aa24.52■■□□□ 1.52
CBX3-204ENST00000456948 AMPD2Q01433 879 aa24.52■■□□□ 1.52
CBX3-204ENST00000456948 UBXN2BQ14CS0 331 aa24.52■■□□□ 1.52
CBX3-204ENST00000456948 PPM1KQ8N3J5 372 aa24.52■■□□□ 1.52
CBX3-204ENST00000456948 EHBP1Q8NDI1 1231 aa24.52■■□□□ 1.52
CBX3-204ENST00000456948 RSPRY1Q96DX4 576 aa24.52■■□□□ 1.52
CBX3-204ENST00000456948 CNOT6LQ96LI5 555 aaKnown RBP24.52■■□□□ 1.52
CBX3-204ENST00000456948 FAM81BQ96LP2 452 aa24.52■■□□□ 1.52
CBX3-204ENST00000456948 SMG9Q9H0W8 520 aaKnown RBP24.52■■□□□ 1.52
CBX3-204ENST00000456948 THAP9Q9H5L6 903 aa24.52■■□□□ 1.52
CBX3-204ENST00000456948 PNPLA8Q9NP80 782 aa24.52■■□□□ 1.52
CBX3-204ENST00000456948 MAGEA9P43362 315 aa24.51■■□□□ 1.51
CBX3-204ENST00000456948 MTIF2P46199 727 aaKnown RBP24.51■■□□□ 1.51
CBX3-204ENST00000456948 RAD23BP54727 409 aa24.51■■□□□ 1.51
CBX3-204ENST00000456948 ARL14EPQ8N8R7 260 aaPredicted RBP24.51■■□□□ 1.51
CBX3-204ENST00000456948 PJA1Q8NG27 643 aa24.51■■□□□ 1.51
CBX3-204ENST00000456948 EXOC4Q96A65 974 aa24.51■■□□□ 1.51
CBX3-204ENST00000456948 SMOQ99835 787 aa24.51■■□□□ 1.51
CBX3-204ENST00000456948 DDX23Q9BUQ8 820 aaKnown RBP24.51■■□□□ 1.51
CBX3-204ENST00000456948 DUSP16Q9BY84 665 aa24.51■■□□□ 1.51
CBX3-204ENST00000456948 PIAS3Q9Y6X2 628 aa24.51■■□□□ 1.51
CBX3-204ENST00000456948 NCANO14594 1321 aa24.51■■□□□ 1.51
CBX3-204ENST00000456948 FAM170BA6NMN3 283 aa24.5■■□□□ 1.51
CBX3-204ENST00000456948 GALR2O43603 387 aaPredicted RBP24.5■■□□□ 1.51
CBX3-204ENST00000456948 TCF15Q12870 199 aa24.5■■□□□ 1.51
CBX3-204ENST00000456948 PDGFRLQ15198 375 aa24.5■■□□□ 1.51
CBX3-204ENST00000456948 DPCR1Q3MIW9 517 aa24.5■■□□□ 1.51
CBX3-204ENST00000456948 SGO2Q562F6 1265 aa24.5■■□□□ 1.51
CBX3-204ENST00000456948 SASS6Q6UVJ0 657 aa24.5■■□□□ 1.51
CBX3-204ENST00000456948 CLEC20AQ6ZU45 233 aa24.5■■□□□ 1.51
CBX3-204ENST00000456948 ALYREFQ86V81 257 aaKnown RBP24.5■■□□□ 1.51
CBX3-204ENST00000456948 SLC4A11Q8NBS3 891 aa24.5■■□□□ 1.51
CBX3-204ENST00000456948 CYP2S1Q96SQ9 504 aa24.5■■□□□ 1.51
CBX3-204ENST00000456948 ARID3AQ99856 593 aa24.5■■□□□ 1.51
CBX3-204ENST00000456948 TLR8Q9NR97 1041 aaKnown RBP24.5■■□□□ 1.51
CBX3-204ENST00000456948 GKN1Q9NS71 199 aa24.5■■□□□ 1.51
CBX3-204ENST00000456948 TMEM30AQ9NV96 361 aa24.5■■□□□ 1.51
CBX3-204ENST00000456948 IL37Q9NZH6 218 aa24.5■■□□□ 1.51
CBX3-204ENST00000456948 GCNT4Q9P109 453 aa24.5■■□□□ 1.51
CBX3-204ENST00000456948 HESX1Q9UBX0 185 aa24.5■■□□□ 1.51
CBX3-204ENST00000456948 ARHGAP26Q9UNA1 814 aa24.5■■□□□ 1.51
CBX3-204ENST00000456948 C2orf78A6NCI8 922 aa24.49■■□□□ 1.51
CBX3-204ENST00000456948 TNFRSF10BO14763 440 aa24.49■■□□□ 1.51
CBX3-204ENST00000456948 HOXD11P31277 338 aaPredicted RBP24.49■■□□□ 1.51
CBX3-204ENST00000456948 GCNT1Q02742 428 aa24.49■■□□□ 1.51
CBX3-204ENST00000456948 ITPRIPL2Q3MIP1 535 aa24.49■■□□□ 1.51
CBX3-204ENST00000456948 HECTD3Q5T447 861 aa24.49■■□□□ 1.51
CBX3-204ENST00000456948 PPP1R26Q5T8A7 1209 aaPredicted RBP24.49■■□□□ 1.51
CBX3-204ENST00000456948 ARHGAP17Q68EM7 881 aa24.49■■□□□ 1.51
CBX3-204ENST00000456948 DDX42Q86XP3 938 aaKnown RBP eCLIP24.49■■□□□ 1.51
CBX3-204ENST00000456948 TTC16Q8NEE8 873 aa24.49■■□□□ 1.51
CBX3-204ENST00000456948 SCAMP5Q8TAC9 235 aa24.49■■□□□ 1.51
CBX3-204ENST00000456948 GPT2Q8TD30 523 aa24.49■■□□□ 1.51
CBX3-204ENST00000456948 FAM3CQ92520 227 aa24.49■■□□□ 1.51
CBX3-204ENST00000456948 UBXN6Q9BZV1 441 aa24.49■■□□□ 1.51
CBX3-204ENST00000456948 NACA2Q9H009 215 aa24.49■■□□□ 1.51
CBX3-204ENST00000456948 LTB4R2Q9NPC1 389 aa24.49■■□□□ 1.51
CBX3-204ENST00000456948 CHORDC1Q9UHD1 332 aaPredicted RBP24.49■■□□□ 1.51
CBX3-204ENST00000456948 PCDHB4Q9Y5E5 795 aa24.49■■□□□ 1.51
CBX3-204ENST00000456948 PI15O43692 258 aa24.48■■□□□ 1.51
CBX3-204ENST00000456948 OBSL1O75147 1896 aa24.48■■□□□ 1.51
CBX3-204ENST00000456948 VDRP11473 427 aa24.48■■□□□ 1.51
CBX3-204ENST00000456948 CD19P15391 556 aa24.48■■□□□ 1.51
CBX3-204ENST00000456948 MTF1Q14872 753 aa24.48■■□□□ 1.51
CBX3-204ENST00000456948 SNX30Q5VWJ9 437 aa24.48■■□□□ 1.51
CBX3-204ENST00000456948 RALGPS2Q86X27 583 aaPredicted RBP24.48■■□□□ 1.51
CBX3-204ENST00000456948 CCDC105Q8IYK2 499 aa24.48■■□□□ 1.51
CBX3-204ENST00000456948 KIAA1958Q8N8K9 716 aa24.48■■□□□ 1.51
CBX3-204ENST00000456948 DTWD2Q8NBA8 298 aa24.48■■□□□ 1.51
CBX3-204ENST00000456948 JAKMIP2Q96AA8 810 aa24.48■■□□□ 1.51
CBX3-204ENST00000456948 LRRC3BQ96PB8 259 aa24.48■■□□□ 1.51
CBX3-204ENST00000456948 FOXQ1Q9C009 403 aa24.48■■□□□ 1.51
CBX3-204ENST00000456948 CCL26Q9Y258 94 aa24.48■■□□□ 1.51
CBX3-204ENST00000456948 FAM92AA1XBS5 289 aa24.47■■□□□ 1.51
CBX3-204ENST00000456948 ARNTLO00327 626 aa24.47■■□□□ 1.51
CBX3-204ENST00000456948 BEST1O76090 585 aa24.47■■□□□ 1.51
CBX3-204ENST00000456948 PAEPP09466 180 aa24.47■■□□□ 1.51
CBX3-204ENST00000456948 TCF3P15923 654 aa24.47■■□□□ 1.51
CBX3-204ENST00000456948 ACO1P21399 889 aaKnown RBP24.47■■□□□ 1.51
CBX3-204ENST00000456948 IFNAR2P48551 515 aa24.47■■□□□ 1.51
CBX3-204ENST00000456948 TUBP50607 506 aa24.47■■□□□ 1.51
CBX3-204ENST00000456948 SLC7A9P82251 487 aa24.47■■□□□ 1.51
CBX3-204ENST00000456948 NR1H3Q13133 447 aa24.47■■□□□ 1.51
CBX3-204ENST00000456948 STILQ15468 1287 aa24.47■■□□□ 1.51
CBX3-204ENST00000456948 TMEM270Q6UE05 265 aa24.47■■□□□ 1.51
CBX3-204ENST00000456948 GBP6Q6ZN66 633 aa24.47■■□□□ 1.51
CBX3-204ENST00000456948 ENOSF1Q7L5Y1 443 aa24.47■■□□□ 1.51
CBX3-204ENST00000456948 TADA2BQ86TJ2 420 aa24.47■■□□□ 1.51
CBX3-204ENST00000456948 ANKRD52Q8NB46 1076 aa24.47■■□□□ 1.51
CBX3-204ENST00000456948 ZMIZ2Q8NF64 920 aa24.47■■□□□ 1.51
CBX3-204ENST00000456948 SH3RF2Q8TEC5 729 aa24.47■■□□□ 1.51
CBX3-204ENST00000456948 ZFYVE19Q96K21 471 aa24.47■■□□□ 1.51
CBX3-204ENST00000456948 INTS2Q9H0H0 1204 aaKnown RBP24.47■■□□□ 1.51
CBX3-204ENST00000456948 SCML2Q9UQR0 700 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms