RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 MARCH8Q5T0T0 291 aa19.23■□□□□ 0.67
SEMA3B-209ENST00000456560 CGB2Q6NT52 195 aa19.23■□□□□ 0.67
SEMA3B-209ENST00000456560 SPATA21Q7Z572 469 aa19.23■□□□□ 0.67
SEMA3B-209ENST00000456560 ANKMY2Q8IV38 441 aa19.23■□□□□ 0.67
SEMA3B-209ENST00000456560 NLRP7Q8WX94 980 aa19.23■□□□□ 0.67
SEMA3B-209ENST00000456560 WDR83Q9BRX9 315 aaKnown RBP19.23■□□□□ 0.67
SEMA3B-209ENST00000456560 GBA2Q9HCG7 927 aaPredicted RBP19.23■□□□□ 0.67
SEMA3B-209ENST00000456560 SENP1Q9P0U3 644 aa19.23■□□□□ 0.67
SEMA3B-209ENST00000456560 FETUBQ9UGM5 382 aa19.23■□□□□ 0.67
SEMA3B-209ENST00000456560 RABGEF1Q9UJ41 708 aa19.23■□□□□ 0.67
SEMA3B-209ENST00000456560 ASMTLO95671 621 aa19.23■□□□□ 0.67
SEMA3B-209ENST00000456560 GRM5P41594 1212 aa19.23■□□□□ 0.67
SEMA3B-209ENST00000456560 IL9RQ01113 521 aa19.23■□□□□ 0.67
SEMA3B-209ENST00000456560 RAB6CQ53S08 254 aa19.23■□□□□ 0.67
SEMA3B-209ENST00000456560 SH3PXD2AQ5TCZ1 1133 aa19.23■□□□□ 0.67
SEMA3B-209ENST00000456560 CAPN12Q6ZSI9 719 aa19.23■□□□□ 0.67
SEMA3B-209ENST00000456560 FAM183BPQ6ZVS7 135 aa19.23■□□□□ 0.67
SEMA3B-209ENST00000456560 RXFP2Q8WXD0 754 aa19.23■□□□□ 0.67
SEMA3B-209ENST00000456560 RAB6CQ9H0N0 254 aa19.23■□□□□ 0.67
SEMA3B-209ENST00000456560 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.23■□□□□ 0.67
SEMA3B-209ENST00000456560 TSPAN16Q9UKR8 245 aa19.23■□□□□ 0.67
SEMA3B-209ENST00000456560 PNMA3Q9UL41 463 aa19.23■□□□□ 0.67
SEMA3B-209ENST00000456560 TCRBV7S3A2A0A539 114 aa19.22■□□□□ 0.67
SEMA3B-209ENST00000456560 H3BRB1 525 aa19.22■□□□□ 0.67
SEMA3B-209ENST00000456560 SMAPO00193 183 aa19.22■□□□□ 0.67
SEMA3B-209ENST00000456560 SPAG7O75391 227 aa19.22■□□□□ 0.67
SEMA3B-209ENST00000456560 CCNA1P78396 465 aa19.22■□□□□ 0.67
SEMA3B-209ENST00000456560 GALNTL6Q49A17 601 aa19.22■□□□□ 0.67
SEMA3B-209ENST00000456560 OR6B2Q6IFH4 312 aa19.22■□□□□ 0.67
SEMA3B-209ENST00000456560 NT5C1AQ9BXI3 368 aa19.22■□□□□ 0.67
SEMA3B-209ENST00000456560 TUT1Q9H6E5 874 aaKnown RBP19.22■□□□□ 0.67
SEMA3B-209ENST00000456560 ARL2BPQ9Y2Y0 163 aa19.22■□□□□ 0.67
SEMA3B-209ENST00000456560 E5RJQ4 531 aa19.21■□□□□ 0.67
SEMA3B-209ENST00000456560 ATP6V1G2O95670 118 aa19.21■□□□□ 0.67
SEMA3B-209ENST00000456560 SNAI1O95863 264 aaPredicted RBP19.21■□□□□ 0.67
SEMA3B-209ENST00000456560 RBP3P10745 1247 aa19.21■□□□□ 0.67
SEMA3B-209ENST00000456560 MMRN1Q13201 1228 aa19.21■□□□□ 0.67
SEMA3B-209ENST00000456560 MTFR1Q15390 333 aa19.21■□□□□ 0.67
SEMA3B-209ENST00000456560 DPH6Q7L8W6 267 aa19.21■□□□□ 0.67
SEMA3B-209ENST00000456560 FAM71DQ8N9W8 422 aa19.21■□□□□ 0.67
SEMA3B-209ENST00000456560 PYROXD1Q8WU10 500 aa19.21■□□□□ 0.67
SEMA3B-209ENST00000456560 KIF12Q96FN5 646 aa19.21■□□□□ 0.67
SEMA3B-209ENST00000456560 PIWIL1Q96J94 861 aaKnown RBP19.21■□□□□ 0.67
SEMA3B-209ENST00000456560 CALN1Q9BXU9 219 aa19.21■□□□□ 0.67
SEMA3B-209ENST00000456560 MIS12Q9H081 205 aa19.21■□□□□ 0.67
SEMA3B-209ENST00000456560 KIF9Q9HAQ2 790 aa19.21■□□□□ 0.67
SEMA3B-209ENST00000456560 PSMC3IPQ9P2W1 217 aaPredicted RBP19.21■□□□□ 0.67
SEMA3B-209ENST00000456560 SMG5Q9UPR3 1016 aaKnown RBP19.21■□□□□ 0.67
SEMA3B-209ENST00000456560 PLXNB2O15031 1838 aa19.21■□□□□ 0.67
SEMA3B-209ENST00000456560 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.21■□□□□ 0.67
SEMA3B-209ENST00000456560 MCF2LO15068 1137 aa19.21■□□□□ 0.67
SEMA3B-209ENST00000456560 TMEM63AO94886 807 aa19.21■□□□□ 0.67
SEMA3B-209ENST00000456560 PDGFRAP16234 1089 aa19.21■□□□□ 0.67
SEMA3B-209ENST00000456560 GEMIN4P57678 1058 aaKnown RBP19.21■□□□□ 0.67
SEMA3B-209ENST00000456560 DPYSL3Q14195 570 aa19.21■□□□□ 0.67
SEMA3B-209ENST00000456560 NOMO1Q15155 1222 aa19.21■□□□□ 0.67
SEMA3B-209ENST00000456560 ZNF467Q7Z7K2 595 aaPredicted RBP19.21■□□□□ 0.67
SEMA3B-209ENST00000456560 ATP11CQ8NB49 1132 aa19.21■□□□□ 0.67
SEMA3B-209ENST00000456560 SPATA18Q8TC71 538 aa19.21■□□□□ 0.67
SEMA3B-209ENST00000456560 PLCD4Q9BRC7 762 aa19.21■□□□□ 0.67
SEMA3B-209ENST00000456560 DHRS4Q9BTZ2 278 aa19.21■□□□□ 0.67
SEMA3B-209ENST00000456560 CITO14578 2027 aa19.21■□□□□ 0.67
SEMA3B-209ENST00000456560 HOXD8P13378 290 aaPredicted RBP19.2■□□□□ 0.66
SEMA3B-209ENST00000456560 KRT15P19012 456 aa19.2■□□□□ 0.66
SEMA3B-209ENST00000456560 SSTR1P30872 391 aa19.2■□□□□ 0.66
SEMA3B-209ENST00000456560 CDH6P55285 790 aa19.2■□□□□ 0.66
SEMA3B-209ENST00000456560 STILQ15468 1287 aa19.2■□□□□ 0.66
SEMA3B-209ENST00000456560 ZKSCAN8Q15776 578 aaPredicted RBP19.2■□□□□ 0.66
SEMA3B-209ENST00000456560 GRIK4Q16099 956 aa19.2■□□□□ 0.66
SEMA3B-209ENST00000456560 C15orf59Q2T9L4 293 aaPredicted RBP19.2■□□□□ 0.66
SEMA3B-209ENST00000456560 GOLGA7BQ2TAP0 167 aa19.2■□□□□ 0.66
SEMA3B-209ENST00000456560 PKDCCQ504Y2 493 aa19.2■□□□□ 0.66
SEMA3B-209ENST00000456560 NPNTQ6UXI9 565 aa19.2■□□□□ 0.66
SEMA3B-209ENST00000456560 ZNF410Q86VK4 478 aa19.2■□□□□ 0.66
SEMA3B-209ENST00000456560 CCDC63Q8NA47 563 aa19.2■□□□□ 0.66
SEMA3B-209ENST00000456560 GRAMD1AQ96CP6 724 aa19.2■□□□□ 0.66
SEMA3B-209ENST00000456560 CXCL16Q9H2A7 254 aa19.2■□□□□ 0.66
SEMA3B-209ENST00000456560 BAIAP2L1Q9UHR4 511 aa19.2■□□□□ 0.66
SEMA3B-209ENST00000456560 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.2■□□□□ 0.66
SEMA3B-209ENST00000456560 PIK3R2O00459 728 aa19.2■□□□□ 0.66
SEMA3B-209ENST00000456560 DPYSL4O14531 572 aa19.2■□□□□ 0.66
SEMA3B-209ENST00000456560 TYROBPO43914 113 aa19.2■□□□□ 0.66
SEMA3B-209ENST00000456560 UBOX5O94941 541 aa19.2■□□□□ 0.66
SEMA3B-209ENST00000456560 TSHRP16473 764 aa19.2■□□□□ 0.66
SEMA3B-209ENST00000456560 STIP1P31948 543 aaKnown RBP19.2■□□□□ 0.66
SEMA3B-209ENST00000456560 PHBP35232 272 aa19.2■□□□□ 0.66
SEMA3B-209ENST00000456560 CCDC14Q49A88 953 aa19.2■□□□□ 0.66
SEMA3B-209ENST00000456560 FAM133BQ5BKY9 247 aaKnown RBP19.2■□□□□ 0.66
SEMA3B-209ENST00000456560 RGS9BPQ6ZS82 235 aa19.2■□□□□ 0.66
SEMA3B-209ENST00000456560 C12orf29Q8N999 325 aa19.2■□□□□ 0.66
SEMA3B-209ENST00000456560 SMC6Q96SB8 1091 aa19.2■□□□□ 0.66
SEMA3B-209ENST00000456560 ACSS3Q9H6R3 686 aa19.2■□□□□ 0.66
SEMA3B-209ENST00000456560 NOD2Q9HC29 1040 aa19.2■□□□□ 0.66
SEMA3B-209ENST00000456560 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.2■□□□□ 0.66
SEMA3B-209ENST00000456560 DONSONQ9NYP3 566 aa19.2■□□□□ 0.66
SEMA3B-209ENST00000456560 XPO7Q9UIA9 1087 aaKnown RBP19.2■□□□□ 0.66
SEMA3B-209ENST00000456560 A0A1W2PPM1 405 aa19.19■□□□□ 0.66
SEMA3B-209ENST00000456560 TFDP2Q14188 446 aa19.19■□□□□ 0.66
SEMA3B-209ENST00000456560 ZC3H12AQ5D1E8 599 aaKnown RBP19.19■□□□□ 0.66
SEMA3B-209ENST00000456560 FAM47CQ5HY64 1035 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms