RNA–Protein interactions for RNA: ENST00000456090.2

SMCR2-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 2, humanhuman

TSL 2 BASIC

Gene SMCR2, Length 564 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR2-201ENST00000456090 PPP3CCP48454 512 aa13.18□□□□□ -0.3
SMCR2-201ENST00000456090 DPYDQ12882 1025 aa13.18□□□□□ -0.3
SMCR2-201ENST00000456090 SRSF5Q13243 272 aaKnown RBP13.18□□□□□ -0.3
SMCR2-201ENST00000456090 SIM2Q14190 667 aaPredicted RBP13.18□□□□□ -0.3
SMCR2-201ENST00000456090 ZACNQ401N2 412 aa13.18□□□□□ -0.3
SMCR2-201ENST00000456090 ERMP1Q7Z2K6 904 aa13.18□□□□□ -0.3
SMCR2-201ENST00000456090 GPR161Q8N6U8 529 aaKnown RBP13.18□□□□□ -0.3
SMCR2-201ENST00000456090 CCDC47Q96A33 483 aaKnown RBP13.18□□□□□ -0.3
SMCR2-201ENST00000456090 EXOC4Q96A65 974 aa13.18□□□□□ -0.3
SMCR2-201ENST00000456090 SLITRK1Q96PX8 696 aa13.18□□□□□ -0.3
SMCR2-201ENST00000456090 KCNK16Q96T55 309 aa13.18□□□□□ -0.3
SMCR2-201ENST00000456090 MED10Q9BTT4 135 aa13.18□□□□□ -0.3
SMCR2-201ENST00000456090 SCAND2PQ9GZW5 306 aaPredicted RBP13.18□□□□□ -0.3
SMCR2-201ENST00000456090 RNF38Q9H0F5 515 aa13.18□□□□□ -0.3
SMCR2-201ENST00000456090 SDCBP2Q9H190 292 aa13.18□□□□□ -0.3
SMCR2-201ENST00000456090 LINC00597Q9H2U6 94 aa13.18□□□□□ -0.3
SMCR2-201ENST00000456090 MAPK8IP1Q9UQF2 711 aa13.18□□□□□ -0.3
SMCR2-201ENST00000456090 THADAQ6YHU6 1953 aa13.18□□□□□ -0.3
SMCR2-201ENST00000456090 ATP8B3O60423 1300 aa13.17□□□□□ -0.3
SMCR2-201ENST00000456090 IKBKBO14920 756 aa13.17□□□□□ -0.3
SMCR2-201ENST00000456090 ATG13O75143 517 aa13.17□□□□□ -0.3
SMCR2-201ENST00000456090 KIF20AO95235 890 aa13.17□□□□□ -0.3
SMCR2-201ENST00000456090 NFATC1O95644 943 aa13.17□□□□□ -0.3
SMCR2-201ENST00000456090 TCF3P15923 654 aa13.17□□□□□ -0.3
SMCR2-201ENST00000456090 NR2F2P24468 414 aa13.17□□□□□ -0.3
SMCR2-201ENST00000456090 YWHAQP27348 245 aa13.17□□□□□ -0.3
SMCR2-201ENST00000456090 HOXA6P31267 233 aa13.17□□□□□ -0.3
SMCR2-201ENST00000456090 CNR2P34972 360 aa13.17□□□□□ -0.3
SMCR2-201ENST00000456090 NR1H3Q13133 447 aa13.17□□□□□ -0.3
SMCR2-201ENST00000456090 ORC1Q13415 861 aa13.17□□□□□ -0.3
SMCR2-201ENST00000456090 RSPO4Q2I0M5 234 aaPredicted RBP13.17□□□□□ -0.3
SMCR2-201ENST00000456090 SGSM1Q2NKQ1 1148 aa13.17□□□□□ -0.3
SMCR2-201ENST00000456090 LAIR1Q6GTX8 287 aa13.17□□□□□ -0.3
SMCR2-201ENST00000456090 KRBA2Q6ZNG9 492 aa13.17□□□□□ -0.3
SMCR2-201ENST00000456090 SV2AQ7L0J3 742 aa13.17□□□□□ -0.3
SMCR2-201ENST00000456090 ACOT1Q86TX2 421 aa13.17□□□□□ -0.3
SMCR2-201ENST00000456090 FAM35AQ86V20 835 aa13.17□□□□□ -0.3
SMCR2-201ENST00000456090 ABCA7Q8IZY2 2146 aa13.17□□□□□ -0.3
SMCR2-201ENST00000456090 NUP93Q8N1F7 819 aa13.17□□□□□ -0.3
SMCR2-201ENST00000456090 TMC2Q8TDI7 906 aa13.17□□□□□ -0.3
SMCR2-201ENST00000456090 CD101Q93033 1021 aa13.17□□□□□ -0.3
SMCR2-201ENST00000456090 FBXO32Q969P5 355 aa13.17□□□□□ -0.3
SMCR2-201ENST00000456090 TNIP3Q96KP6 325 aa13.17□□□□□ -0.3
SMCR2-201ENST00000456090 GOLPH3LQ9H4A5 285 aa13.17□□□□□ -0.3
SMCR2-201ENST00000456090 GDPD2Q9HCC8 539 aa13.17□□□□□ -0.3
SMCR2-201ENST00000456090 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.17□□□□□ -0.3
SMCR2-201ENST00000456090 SMPD4Q9NXE4 827 aa13.17□□□□□ -0.3
SMCR2-201ENST00000456090 USP18Q9UMW8 372 aa13.17□□□□□ -0.3
SMCR2-201ENST00000456090 SLC8A2Q9UPR5 921 aa13.17□□□□□ -0.3
SMCR2-201ENST00000456090 TRAF3IP3Q9Y228 551 aa13.17□□□□□ -0.3
SMCR2-201ENST00000456090 CPQQ9Y646 472 aa13.17□□□□□ -0.3
SMCR2-201ENST00000456090 A0A1W2PQ27 194 aa13.16□□□□□ -0.3
SMCR2-201ENST00000456090 A0A1W2PQ64 194 aa13.16□□□□□ -0.3
SMCR2-201ENST00000456090 A0A1W2PQD8 194 aa13.16□□□□□ -0.3
SMCR2-201ENST00000456090 ZNF202O95125 648 aa13.16□□□□□ -0.3
SMCR2-201ENST00000456090 RTN3O95197 1032 aaPredicted RBP13.16□□□□□ -0.3
SMCR2-201ENST00000456090 OLFM2O95897 454 aa13.16□□□□□ -0.3
SMCR2-201ENST00000456090 ASS1P00966 412 aaKnown RBP13.16□□□□□ -0.3
SMCR2-201ENST00000456090 OAS1P00973 400 aaKnown RBP13.16□□□□□ -0.3
SMCR2-201ENST00000456090 CCDC130P13994 396 aa13.16□□□□□ -0.3
SMCR2-201ENST00000456090 TGM1P22735 817 aa13.16□□□□□ -0.3
SMCR2-201ENST00000456090 PIK3CAP42336 1068 aa13.16□□□□□ -0.3
SMCR2-201ENST00000456090 PXNP49023 591 aaPredicted RBP13.16□□□□□ -0.3
SMCR2-201ENST00000456090 VAMP7P51809 220 aa13.16□□□□□ -0.3
SMCR2-201ENST00000456090 SLC7A9P82251 487 aa13.16□□□□□ -0.3
SMCR2-201ENST00000456090 SPEM2Q0P670 501 aa13.16□□□□□ -0.3
SMCR2-201ENST00000456090 PUM1Q14671 1186 aaKnown RBP eCLIP13.16□□□□□ -0.3
SMCR2-201ENST00000456090 FBXO43Q4G163 708 aa13.16□□□□□ -0.3
SMCR2-201ENST00000456090 C1orf220Q5T0J3 134 aa13.16□□□□□ -0.3
SMCR2-201ENST00000456090 SPOPLQ6IQ16 392 aa13.16□□□□□ -0.3
SMCR2-201ENST00000456090 PAQR9Q6ZVX9 377 aa13.16□□□□□ -0.3
SMCR2-201ENST00000456090 DGLUCYQ7Z3D6 616 aa13.16□□□□□ -0.3
SMCR2-201ENST00000456090 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.16□□□□□ -0.3
SMCR2-201ENST00000456090 FILIP1Q7Z7B0 1213 aa13.16□□□□□ -0.3
SMCR2-201ENST00000456090 WDR5BQ86VZ2 330 aa13.16□□□□□ -0.3
SMCR2-201ENST00000456090 FUKQ8N0W3 1084 aa13.16□□□□□ -0.3
SMCR2-201ENST00000456090 RPLP0P6Q8NHW5 317 aa13.16□□□□□ -0.3
SMCR2-201ENST00000456090 SCAMP5Q8TAC9 235 aa13.16□□□□□ -0.3
SMCR2-201ENST00000456090 TAF4BQ92750 862 aa13.16□□□□□ -0.3
SMCR2-201ENST00000456090 SMARCD1Q96GM5 515 aa13.16□□□□□ -0.3
SMCR2-201ENST00000456090 PARD6AQ9NPB6 346 aa13.16□□□□□ -0.3
SMCR2-201ENST00000456090 DMAP1Q9NPF5 467 aaPredicted RBP13.16□□□□□ -0.3
SMCR2-201ENST00000456090 KRT82Q9NSB4 513 aa13.16□□□□□ -0.3
SMCR2-201ENST00000456090 POLR3BQ9NW08 1133 aaPredicted RBP13.16□□□□□ -0.3
SMCR2-201ENST00000456090 HMGXB4Q9UGU5 601 aa13.16□□□□□ -0.3
SMCR2-201ENST00000456090 NCOR2Q9Y618 2525 aa13.16□□□□□ -0.3
SMCR2-201ENST00000456090 CNOT1A5YKK6 2376 aaKnown RBP13.15□□□□□ -0.3
SMCR2-201ENST00000456090 SCAMP3O14828 347 aaKnown RBP13.15□□□□□ -0.3
SMCR2-201ENST00000456090 MAPK13O15264 365 aa13.15□□□□□ -0.3
SMCR2-201ENST00000456090 AP1G2O75843 785 aa13.15□□□□□ -0.3
SMCR2-201ENST00000456090 AKAP3O75969 853 aa13.15□□□□□ -0.3
SMCR2-201ENST00000456090 HLA-DRAP01903 254 aa13.15□□□□□ -0.3
SMCR2-201ENST00000456090 RETP07949 1114 aa13.15□□□□□ -0.3
SMCR2-201ENST00000456090 TRIM49P0CI25 452 aa13.15□□□□□ -0.3
SMCR2-201ENST00000456090 TRIM49CP0CI26 452 aa13.15□□□□□ -0.3
SMCR2-201ENST00000456090 MBL2P11226 248 aaPredicted RBP13.15□□□□□ -0.3
SMCR2-201ENST00000456090 ASPAP45381 313 aa13.15□□□□□ -0.3
SMCR2-201ENST00000456090 GCLMP48507 274 aa13.15□□□□□ -0.3
SMCR2-201ENST00000456090 NDST1P52848 882 aa13.15□□□□□ -0.3
SMCR2-201ENST00000456090 SLC5A3P53794 718 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms