RNA–Protein interactions for RNA: ENST00000455954.2

CHCHD4P3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4 pseudogene 3, humanhuman

BASIC

Gene CHCHD4P3, Length 410 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4P3-201ENST00000455954 ZNF75CPQ92670 426 aaPredicted RBP10.5□□□□□ -0.73
CHCHD4P3-201ENST00000455954 PTCD3Q96EY7 689 aaKnown RBP10.5□□□□□ -0.73
CHCHD4P3-201ENST00000455954 NSL1Q96IY1 281 aa10.5□□□□□ -0.73
CHCHD4P3-201ENST00000455954 DHRS4Q9BTZ2 278 aa10.5□□□□□ -0.73
CHCHD4P3-201ENST00000455954 DENND2DQ9H6A0 471 aaPredicted RBP10.5□□□□□ -0.73
CHCHD4P3-201ENST00000455954 MLXIPLQ9NP71 852 aa10.5□□□□□ -0.73
CHCHD4P3-201ENST00000455954 SAYSD1Q9NPB0 183 aa10.5□□□□□ -0.73
CHCHD4P3-201ENST00000455954 NMRK1Q9NWW6 199 aa10.5□□□□□ -0.73
CHCHD4P3-201ENST00000455954 DDX43Q9NXZ2 648 aaKnown RBP10.5□□□□□ -0.73
CHCHD4P3-201ENST00000455954 WDR35Q9P2L0 1181 aa10.5□□□□□ -0.73
CHCHD4P3-201ENST00000455954 STX18Q9P2W9 335 aaKnown RBP10.5□□□□□ -0.73
CHCHD4P3-201ENST00000455954 UMODL1Q5DID0 1318 aa10.5□□□□□ -0.73
CHCHD4P3-201ENST00000455954 WDR81Q562E7 1941 aa10.5□□□□□ -0.73
CHCHD4P3-201ENST00000455954 KIAA1217Q5T5P2 1943 aa10.49□□□□□ -0.73
CHCHD4P3-201ENST00000455954 SPATA31C2B4DYI2 1134 aa10.49□□□□□ -0.73
CHCHD4P3-201ENST00000455954 IPO5O00410 1097 aaKnown RBP10.49□□□□□ -0.73
CHCHD4P3-201ENST00000455954 SOX1O00570 391 aaPredicted RBP10.49□□□□□ -0.73
CHCHD4P3-201ENST00000455954 LIASO43766 372 aa10.49□□□□□ -0.73
CHCHD4P3-201ENST00000455954 B4GALT4O60513 344 aa10.49□□□□□ -0.73
CHCHD4P3-201ENST00000455954 MAGEC1O60732 1142 aa10.49□□□□□ -0.73
CHCHD4P3-201ENST00000455954 RTN3O95197 1032 aaPredicted RBP10.49□□□□□ -0.73
CHCHD4P3-201ENST00000455954 PSMG1O95456 288 aa10.49□□□□□ -0.73
CHCHD4P3-201ENST00000455954 CYP1A1P04798 512 aaPredicted RBP10.49□□□□□ -0.73
CHCHD4P3-201ENST00000455954 SUPT20HL2P0C7V6 817 aa10.49□□□□□ -0.73
CHCHD4P3-201ENST00000455954 RALAP11233 206 aa10.49□□□□□ -0.73
CHCHD4P3-201ENST00000455954 GM2AP17900 193 aa10.49□□□□□ -0.73
CHCHD4P3-201ENST00000455954 KRT15P19012 456 aa10.49□□□□□ -0.73
CHCHD4P3-201ENST00000455954 CA4P22748 312 aa10.49□□□□□ -0.73
CHCHD4P3-201ENST00000455954 ICAM3P32942 547 aa10.49□□□□□ -0.73
CHCHD4P3-201ENST00000455954 CLCN2P51788 898 aa10.49□□□□□ -0.73
CHCHD4P3-201ENST00000455954 RAP1GDS1P52306 607 aa10.49□□□□□ -0.73
CHCHD4P3-201ENST00000455954 MRPS9P82933 396 aaKnown RBP10.49□□□□□ -0.73
CHCHD4P3-201ENST00000455954 PTPN11Q06124 597 aaPredicted RBP10.49□□□□□ -0.73
CHCHD4P3-201ENST00000455954 BIRC2Q13490 618 aa10.49□□□□□ -0.73
CHCHD4P3-201ENST00000455954 SHHQ15465 462 aa10.49□□□□□ -0.73
CHCHD4P3-201ENST00000455954 TBCCQ15814 346 aa10.49□□□□□ -0.73
CHCHD4P3-201ENST00000455954 DGKDQ16760 1214 aa10.49□□□□□ -0.73
CHCHD4P3-201ENST00000455954 TAF1BQ53T94 588 aaPredicted RBP10.49□□□□□ -0.73
CHCHD4P3-201ENST00000455954 FAM47CQ5HY64 1035 aa10.49□□□□□ -0.73
CHCHD4P3-201ENST00000455954 CELF3Q5SZQ8 465 aaKnown RBP10.49□□□□□ -0.73
CHCHD4P3-201ENST00000455954 TRIM68Q6AZZ1 485 aa10.49□□□□□ -0.73
CHCHD4P3-201ENST00000455954 OR52E8Q6IFG1 317 aa10.49□□□□□ -0.73
CHCHD4P3-201ENST00000455954 PADI6Q6TGC4 694 aa10.49□□□□□ -0.73
CHCHD4P3-201ENST00000455954 ADGRG6Q86SQ4 1221 aa10.49□□□□□ -0.73
CHCHD4P3-201ENST00000455954 TRIM42Q8IWZ5 723 aa10.49□□□□□ -0.73
CHCHD4P3-201ENST00000455954 PPM1KQ8N3J5 372 aa10.49□□□□□ -0.73
CHCHD4P3-201ENST00000455954 TMEM199Q8N511 208 aa10.49□□□□□ -0.73
CHCHD4P3-201ENST00000455954 ALLCQ8N6M5 410 aa10.49□□□□□ -0.73
CHCHD4P3-201ENST00000455954 FBXL13Q8NEE6 735 aa10.49□□□□□ -0.73
CHCHD4P3-201ENST00000455954 PPTC7Q8NI37 304 aa10.49□□□□□ -0.73
CHCHD4P3-201ENST00000455954 PLEKHO2Q8TD55 490 aa10.49□□□□□ -0.73
CHCHD4P3-201ENST00000455954 APBB2Q92870 758 aa10.49□□□□□ -0.73
CHCHD4P3-201ENST00000455954 NKD2Q969F2 451 aaPredicted RBP10.49□□□□□ -0.73
CHCHD4P3-201ENST00000455954 BTBD6Q96KE9 485 aa10.49□□□□□ -0.73
CHCHD4P3-201ENST00000455954 C9orf72Q96LT7 481 aa10.49□□□□□ -0.73
CHCHD4P3-201ENST00000455954 MFSD14AQ96MC6 490 aa10.49□□□□□ -0.73
CHCHD4P3-201ENST00000455954 FBXL18Q96ME1 805 aa10.49□□□□□ -0.73
CHCHD4P3-201ENST00000455954 SYT15Q9BQS2 421 aa10.49□□□□□ -0.73
CHCHD4P3-201ENST00000455954 LXNQ9BS40 222 aa10.49□□□□□ -0.73
CHCHD4P3-201ENST00000455954 TRIM55Q9BYV6 548 aa10.49□□□□□ -0.73
CHCHD4P3-201ENST00000455954 TRPV6Q9H1D0 765 aa10.49□□□□□ -0.73
CHCHD4P3-201ENST00000455954 UNC45AQ9H3U1 944 aa10.49□□□□□ -0.73
CHCHD4P3-201ENST00000455954 BCAS3Q9H6U6 928 aa10.49□□□□□ -0.73
CHCHD4P3-201ENST00000455954 PCDH9Q9HC56 1237 aa10.49□□□□□ -0.73
CHCHD4P3-201ENST00000455954 TBK1Q9UHD2 729 aa10.49□□□□□ -0.73
CHCHD4P3-201ENST00000455954 EFR3BQ9Y2G0 817 aa10.49□□□□□ -0.73
CHCHD4P3-201ENST00000455954 R3HDM2Q9Y2K5 976 aaKnown RBP10.49□□□□□ -0.73
CHCHD4P3-201ENST00000455954 PCDHB2Q9Y5E7 798 aa10.49□□□□□ -0.73
CHCHD4P3-201ENST00000455954 CEP290O15078 2479 aa10.49□□□□□ -0.73
CHCHD4P3-201ENST00000455954 ENO4A6NNW6 628 aa10.48□□□□□ -0.73
CHCHD4P3-201ENST00000455954 KLF11O14901 512 aa10.48□□□□□ -0.73
CHCHD4P3-201ENST00000455954 MAP3K7O43318 606 aa10.48□□□□□ -0.73
CHCHD4P3-201ENST00000455954 TJP3O95049 919 aa10.48□□□□□ -0.73
CHCHD4P3-201ENST00000455954 ITGAVP06756 1048 aa10.48□□□□□ -0.73
CHCHD4P3-201ENST00000455954 P4HBP07237 508 aaKnown RBP10.48□□□□□ -0.73
CHCHD4P3-201ENST00000455954 UBA1P22314 1058 aaKnown RBP10.48□□□□□ -0.73
CHCHD4P3-201ENST00000455954 NSFP46459 744 aaKnown RBP10.48□□□□□ -0.73
CHCHD4P3-201ENST00000455954 GEMIN4P57678 1058 aaKnown RBP10.48□□□□□ -0.73
CHCHD4P3-201ENST00000455954 CDK16Q00536 496 aa10.48□□□□□ -0.73
CHCHD4P3-201ENST00000455954 SP2Q02086 613 aa10.48□□□□□ -0.73
CHCHD4P3-201ENST00000455954 C1QBPQ07021 282 aaKnown RBP10.48□□□□□ -0.73
CHCHD4P3-201ENST00000455954 SEPT7Q16181 437 aaKnown RBP10.48□□□□□ -0.73
CHCHD4P3-201ENST00000455954 P3H1Q32P28 736 aa10.48□□□□□ -0.73
CHCHD4P3-201ENST00000455954 C9orf50Q5SZB4 431 aa10.48□□□□□ -0.73
CHCHD4P3-201ENST00000455954 SNX30Q5VWJ9 437 aa10.48□□□□□ -0.73
CHCHD4P3-201ENST00000455954 LRRC74BQ6ZQY2 392 aa10.48□□□□□ -0.73
CHCHD4P3-201ENST00000455954 MON1BQ7L1V2 547 aa10.48□□□□□ -0.73
CHCHD4P3-201ENST00000455954 NLRX1Q86UT6 975 aa10.48□□□□□ -0.73
CHCHD4P3-201ENST00000455954 PHF13Q86YI8 300 aaPredicted RBP10.48□□□□□ -0.73
CHCHD4P3-201ENST00000455954 CPNE8Q86YQ8 564 aa10.48□□□□□ -0.73
CHCHD4P3-201ENST00000455954 ATP11CQ8NB49 1132 aa10.48□□□□□ -0.73
CHCHD4P3-201ENST00000455954 PARD3BQ8TEW8 1205 aa10.48□□□□□ -0.73
CHCHD4P3-201ENST00000455954 ATG4AQ8WYN0 398 aa10.48□□□□□ -0.73
CHCHD4P3-201ENST00000455954 GATA6Q92908 595 aa10.48□□□□□ -0.73
CHCHD4P3-201ENST00000455954 KAT5Q92993 513 aa10.48□□□□□ -0.73
CHCHD4P3-201ENST00000455954 STMN2Q93045 179 aa10.48□□□□□ -0.73
CHCHD4P3-201ENST00000455954 SKA1Q96BD8 255 aa10.48□□□□□ -0.73
CHCHD4P3-201ENST00000455954 ZBTB10Q96DT7 871 aa10.48□□□□□ -0.73
CHCHD4P3-201ENST00000455954 LRCH3Q96II8 777 aa10.48□□□□□ -0.73
CHCHD4P3-201ENST00000455954 SPATA33Q96N06 139 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms