RNA–Protein interactions for RNA: ENST00000455396.1

CRAT-205, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 3

Gene CRAT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-205ENST00000455396 SPATA2LQ8IUW3 424 aaPredicted RBP13.14□□□□□ -0.31
CRAT-205ENST00000455396 SLC41A1Q8IVJ1 513 aa13.14□□□□□ -0.31
CRAT-205ENST00000455396 PNPLA1Q8N8W4 532 aa13.14□□□□□ -0.31
CRAT-205ENST00000455396 DUSP9Q99956 384 aaKnown RBP13.14□□□□□ -0.31
CRAT-205ENST00000455396 TTLL2Q9BWV7 592 aa13.14□□□□□ -0.31
CRAT-205ENST00000455396 CD248Q9HCU0 757 aa13.14□□□□□ -0.31
CRAT-205ENST00000455396 GDAP2Q9NXN4 497 aa13.14□□□□□ -0.31
CRAT-205ENST00000455396 EHD2Q9NZN4 543 aa13.14□□□□□ -0.31
CRAT-205ENST00000455396 TRPM5Q9NZQ8 1165 aa13.14□□□□□ -0.31
CRAT-205ENST00000455396 CALCOCO1Q9P1Z2 691 aa13.14□□□□□ -0.31
CRAT-205ENST00000455396 TBC1D14Q9P2M4 693 aa13.14□□□□□ -0.31
CRAT-205ENST00000455396 PCOLCE2Q9UKZ9 415 aa13.14□□□□□ -0.31
CRAT-205ENST00000455396 L1RE1Q9UN81 338 aa13.14□□□□□ -0.31
CRAT-205ENST00000455396 NFE2L3Q9Y4A8 694 aa13.14□□□□□ -0.31
CRAT-205ENST00000455396 GON4LQ3T8J9 2241 aa13.14□□□□□ -0.31
CRAT-205ENST00000455396 PCDH15Q96QU1 1955 aa13.13□□□□□ -0.31
CRAT-205ENST00000455396 ZNF840PA6NDX5 716 aa13.13□□□□□ -0.31
CRAT-205ENST00000455396 HUS1O60921 280 aa13.13□□□□□ -0.31
CRAT-205ENST00000455396 IL18RAPO95256 599 aa13.13□□□□□ -0.31
CRAT-205ENST00000455396 GNSP15586 552 aa13.13□□□□□ -0.31
CRAT-205ENST00000455396 PCSK1P29120 753 aa13.13□□□□□ -0.31
CRAT-205ENST00000455396 LHX1P48742 406 aa13.13□□□□□ -0.31
CRAT-205ENST00000455396 PLEKHG6Q3KR16 790 aa13.13□□□□□ -0.31
CRAT-205ENST00000455396 DBX2Q6ZNG2 339 aa13.13□□□□□ -0.31
CRAT-205ENST00000455396 DDX42Q86XP3 938 aaKnown RBP eCLIP13.13□□□□□ -0.31
CRAT-205ENST00000455396 ETFBKMTQ8IXQ9 262 aa13.13□□□□□ -0.31
CRAT-205ENST00000455396 LRRC52Q8N7C0 313 aa13.13□□□□□ -0.31
CRAT-205ENST00000455396 TRIML1Q8N9V2 468 aa13.13□□□□□ -0.31
CRAT-205ENST00000455396 LSM14AQ8ND56 463 aaKnown RBP13.13□□□□□ -0.31
CRAT-205ENST00000455396 FOXJ1Q92949 421 aa13.13□□□□□ -0.31
CRAT-205ENST00000455396 OTUB2Q96DC9 234 aa13.13□□□□□ -0.31
CRAT-205ENST00000455396 FIZ1Q96SL8 496 aa13.13□□□□□ -0.31
CRAT-205ENST00000455396 STARD13Q9Y3M8 1113 aa13.13□□□□□ -0.31
CRAT-205ENST00000455396 PCDHB6Q9Y5E3 794 aa13.13□□□□□ -0.31
CRAT-205ENST00000455396 ASXL3Q9C0F0 2248 aa13.13□□□□□ -0.31
CRAT-205ENST00000455396 TSC2P49815 1807 aa13.13□□□□□ -0.31
CRAT-205ENST00000455396 KIAA1549LQ6ZVL6 1849 aa13.12□□□□□ -0.31
CRAT-205ENST00000455396 NPHP3-ACAD11A0A0J9YXS1 232 aa13.12□□□□□ -0.31
CRAT-205ENST00000455396 A0A1W2PQF6 199 aa13.12□□□□□ -0.31
CRAT-205ENST00000455396 K7ENM7 598 aa13.12□□□□□ -0.31
CRAT-205ENST00000455396 HOXC11O43248 304 aaPredicted RBP13.12□□□□□ -0.31
CRAT-205ENST00000455396 SLC26A4O43511 780 aa13.12□□□□□ -0.31
CRAT-205ENST00000455396 TRAK2O60296 914 aa13.12□□□□□ -0.31
CRAT-205ENST00000455396 OAS1P00973 400 aaKnown RBP13.12□□□□□ -0.31
CRAT-205ENST00000455396 ADH5P11766 374 aa13.12□□□□□ -0.31
CRAT-205ENST00000455396 ACAT1P24752 427 aaKnown RBP13.12□□□□□ -0.31
CRAT-205ENST00000455396 GAD2Q05329 585 aa13.12□□□□□ -0.31
CRAT-205ENST00000455396 TMEM119Q4V9L6 283 aa13.12□□□□□ -0.31
CRAT-205ENST00000455396 SYCP2LQ5T4T6 812 aa13.12□□□□□ -0.31
CRAT-205ENST00000455396 ADALQ6DHV7 355 aa13.12□□□□□ -0.31
CRAT-205ENST00000455396 CRELD2Q6UXH1 353 aaPredicted RBP13.12□□□□□ -0.31
CRAT-205ENST00000455396 C4orf50Q6ZRC1 276 aa13.12□□□□□ -0.31
CRAT-205ENST00000455396 DENND5BQ6ZUT9 1274 aa13.12□□□□□ -0.31
CRAT-205ENST00000455396 NUDT18Q6ZVK8 323 aa13.12□□□□□ -0.31
CRAT-205ENST00000455396 SCN4BQ8IWT1 228 aa13.12□□□□□ -0.31
CRAT-205ENST00000455396 DEFB119Q8N690 84 aa13.12□□□□□ -0.31
CRAT-205ENST00000455396 TOP6BLQ8N6T0 577 aa13.12□□□□□ -0.31
CRAT-205ENST00000455396 ZNF513Q8N8E2 541 aaPredicted RBP13.12□□□□□ -0.31
CRAT-205ENST00000455396 CXorf38Q8TB03 319 aa13.12□□□□□ -0.31
CRAT-205ENST00000455396 BAHD1Q8TBE0 780 aaPredicted RBP13.12□□□□□ -0.31
CRAT-205ENST00000455396 HSPA12BQ96MM6 686 aa13.12□□□□□ -0.31
CRAT-205ENST00000455396 REEP2Q9BRK0 252 aa13.12□□□□□ -0.31
CRAT-205ENST00000455396 LLPHQ9BRT6 129 aaKnown RBP13.12□□□□□ -0.31
CRAT-205ENST00000455396 RNF38Q9H0F5 515 aa13.12□□□□□ -0.31
CRAT-205ENST00000455396 ST6GALNAC4Q9H4F1 302 aa13.12□□□□□ -0.31
CRAT-205ENST00000455396 PARVGQ9HBI0 331 aa13.12□□□□□ -0.31
CRAT-205ENST00000455396 AGO2Q9UKV8 859 aaKnown RBP13.12□□□□□ -0.31
CRAT-205ENST00000455396 CPQQ9Y646 472 aa13.12□□□□□ -0.31
CRAT-205ENST00000455396 KALRNO60229 2985 aa13.11□□□□□ -0.31
CRAT-205ENST00000455396 E2F8A0AVK6 867 aa13.11□□□□□ -0.31
CRAT-205ENST00000455396 TBC1D3BA6NDS4 549 aa13.11□□□□□ -0.31
CRAT-205ENST00000455396 ANKRD63C9JTQ0 380 aa13.11□□□□□ -0.31
CRAT-205ENST00000455396 E9PAM4 449 aa13.11□□□□□ -0.31
CRAT-205ENST00000455396 ZBTB24O43167 697 aaPredicted RBP13.11□□□□□ -0.31
CRAT-205ENST00000455396 HOXB2P14652 356 aa13.11□□□□□ -0.31
CRAT-205ENST00000455396 NTSR1P30989 418 aa13.11□□□□□ -0.31
CRAT-205ENST00000455396 NOP14P78316 857 aaKnown RBP13.11□□□□□ -0.31
CRAT-205ENST00000455396 GRIK2Q13002 908 aa13.11□□□□□ -0.31
CRAT-205ENST00000455396 CAMK2BQ13554 666 aa13.11□□□□□ -0.31
CRAT-205ENST00000455396 MAPRE1Q15691 268 aaKnown RBP13.11□□□□□ -0.31
CRAT-205ENST00000455396 WDR45BQ5MNZ6 344 aa13.11□□□□□ -0.31
CRAT-205ENST00000455396 DPH6Q7L8W6 267 aa13.11□□□□□ -0.31
CRAT-205ENST00000455396 LIMS2Q7Z4I7 341 aa13.11□□□□□ -0.31
CRAT-205ENST00000455396 GALNT15Q8N3T1 639 aa13.11□□□□□ -0.31
CRAT-205ENST00000455396 MYCT1Q8N699 235 aa13.11□□□□□ -0.31
CRAT-205ENST00000455396 DNASE2BQ8WZ79 361 aa13.11□□□□□ -0.31
CRAT-205ENST00000455396 KIF2CQ99661 725 aa13.11□□□□□ -0.31
CRAT-205ENST00000455396 CDC6Q99741 560 aa13.11□□□□□ -0.31
CRAT-205ENST00000455396 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.11□□□□□ -0.31
CRAT-205ENST00000455396 TOR4AQ9NXH8 423 aa13.11□□□□□ -0.31
CRAT-205ENST00000455396 HCN2Q9UL51 889 aa13.11□□□□□ -0.31
CRAT-205ENST00000455396 PCDHGB2Q9Y5G2 931 aa13.11□□□□□ -0.31
CRAT-205ENST00000455396 TNRC6BQ9UPQ9 1833 aaKnown RBP13.11□□□□□ -0.31
CRAT-205ENST00000455396 URB1O60287 2271 aaKnown RBP13.1□□□□□ -0.31
CRAT-205ENST00000455396 C1QL1O75973 258 aa13.1□□□□□ -0.31
CRAT-205ENST00000455396 NDUFV2P19404 249 aa13.1□□□□□ -0.31
CRAT-205ENST00000455396 POLR2BP30876 1174 aaKnown RBP13.1□□□□□ -0.31
CRAT-205ENST00000455396 USP46P62068 366 aa13.1□□□□□ -0.31
CRAT-205ENST00000455396 GNL2Q13823 731 aaKnown RBP13.1□□□□□ -0.31
CRAT-205ENST00000455396 POSTNQ15063 836 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms