RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 EZRP15311 586 aaKnown RBP13.08□□□□□ -0.31
ECHDC1-209ENST00000454591 CA4P22748 312 aa13.08□□□□□ -0.31
ECHDC1-209ENST00000454591 ALDH3A1P30838 453 aa13.08□□□□□ -0.31
ECHDC1-209ENST00000454591 RPA3P35244 121 aaPredicted RBP13.08□□□□□ -0.31
ECHDC1-209ENST00000454591 RAP1GAPP47736 663 aa13.08□□□□□ -0.31
ECHDC1-209ENST00000454591 CLCN3P51790 818 aa13.08□□□□□ -0.31
ECHDC1-209ENST00000454591 RBP5P82980 135 aa13.08□□□□□ -0.31
ECHDC1-209ENST00000454591 ROR1Q01973 937 aa13.08□□□□□ -0.31
ECHDC1-209ENST00000454591 ARHGAP1Q07960 439 aa13.08□□□□□ -0.31
ECHDC1-209ENST00000454591 LAMC2Q13753 1193 aa13.08□□□□□ -0.31
ECHDC1-209ENST00000454591 ZKSCAN8Q15776 578 aaPredicted RBP13.08□□□□□ -0.31
ECHDC1-209ENST00000454591 BOLA3Q53S33 107 aa13.08□□□□□ -0.31
ECHDC1-209ENST00000454591 SLC45A4Q5BKX6 768 aa13.08□□□□□ -0.31
ECHDC1-209ENST00000454591 ARCQ7LC44 396 aa13.08□□□□□ -0.31
ECHDC1-209ENST00000454591 TBC1D1Q86TI0 1168 aaPredicted RBP13.08□□□□□ -0.31
ECHDC1-209ENST00000454591 RFX6Q8HWS3 928 aa13.08□□□□□ -0.31
ECHDC1-209ENST00000454591 ANKRD13AQ8IZ07 590 aa13.08□□□□□ -0.31
ECHDC1-209ENST00000454591 AGGF1Q8N302 714 aaeCLIP13.08□□□□□ -0.31
ECHDC1-209ENST00000454591 KCTD6Q8NC69 237 aa13.08□□□□□ -0.31
ECHDC1-209ENST00000454591 CFAP61Q8NHU2 1237 aa13.08□□□□□ -0.31
ECHDC1-209ENST00000454591 LRRC8CQ8TDW0 803 aa13.08□□□□□ -0.31
ECHDC1-209ENST00000454591 SLC44A1Q8WWI5 657 aa13.08□□□□□ -0.31
ECHDC1-209ENST00000454591 ACSF2Q96CM8 615 aaPredicted RBP13.08□□□□□ -0.31
ECHDC1-209ENST00000454591 HAUS1Q96CS2 278 aa13.08□□□□□ -0.31
ECHDC1-209ENST00000454591 FAF2Q96CS3 445 aa13.08□□□□□ -0.31
ECHDC1-209ENST00000454591 LRRC39Q96DD0 335 aa13.08□□□□□ -0.31
ECHDC1-209ENST00000454591 NLRP4Q96MN2 994 aa13.08□□□□□ -0.31
ECHDC1-209ENST00000454591 PEBP4Q96S96 227 aa13.08□□□□□ -0.31
ECHDC1-209ENST00000454591 CYTH2Q99418 400 aa13.08□□□□□ -0.31
ECHDC1-209ENST00000454591 MLXIPLQ9NP71 852 aa13.08□□□□□ -0.31
ECHDC1-209ENST00000454591 MKS1Q9NXB0 559 aa13.08□□□□□ -0.31
ECHDC1-209ENST00000454591 PAK5Q9P286 719 aa13.08□□□□□ -0.31
ECHDC1-209ENST00000454591 GTF2IRD1Q9UHL9 959 aa13.08□□□□□ -0.31
ECHDC1-209ENST00000454591 A0A1W2PPM1 405 aa13.08□□□□□ -0.32
ECHDC1-209ENST00000454591 BCLAF3A2AJT9 711 aaKnown RBP13.08□□□□□ -0.32
ECHDC1-209ENST00000454591 M0QYV0 167 aa13.08□□□□□ -0.32
ECHDC1-209ENST00000454591 SPAG7O75391 227 aa13.08□□□□□ -0.32
ECHDC1-209ENST00000454591 PFKMP08237 780 aa13.08□□□□□ -0.32
ECHDC1-209ENST00000454591 KRT19P08727 400 aa13.08□□□□□ -0.32
ECHDC1-209ENST00000454591 CD48P09326 243 aa13.08□□□□□ -0.32
ECHDC1-209ENST00000454591 TXNP10599 105 aaKnown RBP13.08□□□□□ -0.32
ECHDC1-209ENST00000454591 OSBPP22059 807 aa13.08□□□□□ -0.32
ECHDC1-209ENST00000454591 CDH8P55286 799 aa13.08□□□□□ -0.32
ECHDC1-209ENST00000454591 KCNJ2P63252 427 aa13.08□□□□□ -0.32
ECHDC1-209ENST00000454591 PDCD11Q14690 1871 aaKnown RBP13.08□□□□□ -0.32
ECHDC1-209ENST00000454591 TMEM132DQ14C87 1099 aa13.08□□□□□ -0.32
ECHDC1-209ENST00000454591 SETDB1Q15047 1291 aa13.08□□□□□ -0.32
ECHDC1-209ENST00000454591 HHATQ5VTY9 493 aa13.08□□□□□ -0.32
ECHDC1-209ENST00000454591 SLC9A4Q6AI14 798 aa13.08□□□□□ -0.32
ECHDC1-209ENST00000454591 C3orf62Q6ZUJ4 267 aa13.08□□□□□ -0.32
ECHDC1-209ENST00000454591 SH2D5Q6ZV89 423 aa13.08□□□□□ -0.32
ECHDC1-209ENST00000454591 FASTKD5Q7L8L6 764 aaKnown RBP13.08□□□□□ -0.32
ECHDC1-209ENST00000454591 EEPD1Q7L9B9 569 aa13.08□□□□□ -0.32
ECHDC1-209ENST00000454591 CCDC125Q86Z20 511 aa13.08□□□□□ -0.32
ECHDC1-209ENST00000454591 ZDHHC17Q8IUH5 632 aa13.08□□□□□ -0.32
ECHDC1-209ENST00000454591 MAP7D3Q8IWC1 876 aa13.08□□□□□ -0.32
ECHDC1-209ENST00000454591 EMC1Q8N766 993 aa13.08□□□□□ -0.32
ECHDC1-209ENST00000454591 FBXO36Q8NEA4 188 aa13.08□□□□□ -0.32
ECHDC1-209ENST00000454591 SH3TC2Q8TF17 1288 aa13.08□□□□□ -0.32
ECHDC1-209ENST00000454591 TRAPPC12Q8WVT3 735 aa13.08□□□□□ -0.32
ECHDC1-209ENST00000454591 ZNF75CPQ92670 426 aaPredicted RBP13.08□□□□□ -0.32
ECHDC1-209ENST00000454591 HPDLQ96IR7 371 aa13.08□□□□□ -0.32
ECHDC1-209ENST00000454591 L3MBTL3Q96JM7 780 aaPredicted RBP13.08□□□□□ -0.32
ECHDC1-209ENST00000454591 RNF157Q96PX1 679 aa13.08□□□□□ -0.32
ECHDC1-209ENST00000454591 RAB3IPQ96QF0 476 aaPredicted RBP13.08□□□□□ -0.32
ECHDC1-209ENST00000454591 ADPGKQ9BRR6 497 aa13.08□□□□□ -0.32
ECHDC1-209ENST00000454591 SLC4A5Q9BY07 1137 aa13.08□□□□□ -0.32
ECHDC1-209ENST00000454591 SYNCQ9H7C4 482 aa13.08□□□□□ -0.32
ECHDC1-209ENST00000454591 PLEKHA5Q9HAU0 1116 aa13.08□□□□□ -0.32
ECHDC1-209ENST00000454591 USP29Q9HBJ7 922 aa13.08□□□□□ -0.32
ECHDC1-209ENST00000454591 TXNRD2Q9NNW7 524 aa13.08□□□□□ -0.32
ECHDC1-209ENST00000454591 SAR1AQ9NR31 198 aa13.08□□□□□ -0.32
ECHDC1-209ENST00000454591 HMGXB4Q9UGU5 601 aa13.08□□□□□ -0.32
ECHDC1-209ENST00000454591 ZNF180Q9UJW8 692 aa13.08□□□□□ -0.32
ECHDC1-209ENST00000454591 CHKBQ9Y259 395 aa13.08□□□□□ -0.32
ECHDC1-209ENST00000454591 IQANK1A0A1B0GTG1 560 aa13.07□□□□□ -0.32
ECHDC1-209ENST00000454591 TRDMT1O14717 391 aaKnown RBP13.07□□□□□ -0.32
ECHDC1-209ENST00000454591 MDM4O15151 490 aa13.07□□□□□ -0.32
ECHDC1-209ENST00000454591 TGDSO95455 350 aa13.07□□□□□ -0.32
ECHDC1-209ENST00000454591 C1QAP02745 245 aa13.07□□□□□ -0.32
ECHDC1-209ENST00000454591 LGALS2P05162 132 aa13.07□□□□□ -0.32
ECHDC1-209ENST00000454591 PGK2P07205 417 aa13.07□□□□□ -0.32
ECHDC1-209ENST00000454591 HOXD8P13378 290 aaPredicted RBP13.07□□□□□ -0.32
ECHDC1-209ENST00000454591 INSRRP14616 1297 aa13.07□□□□□ -0.32
ECHDC1-209ENST00000454591 CYP3A5P20815 502 aa13.07□□□□□ -0.32
ECHDC1-209ENST00000454591 CCND1P24385 295 aa13.07□□□□□ -0.32
ECHDC1-209ENST00000454591 SSTR1P30872 391 aa13.07□□□□□ -0.32
ECHDC1-209ENST00000454591 GRM5P41594 1212 aa13.07□□□□□ -0.32
ECHDC1-209ENST00000454591 MSH2P43246 934 aa13.07□□□□□ -0.32
ECHDC1-209ENST00000454591 RPL34P49207 117 aaKnown RBP13.07□□□□□ -0.32
ECHDC1-209ENST00000454591 NEK3P51956 506 aa13.07□□□□□ -0.32
ECHDC1-209ENST00000454591 CCNG1P51959 295 aa13.07□□□□□ -0.32
ECHDC1-209ENST00000454591 SNX16P57768 344 aa13.07□□□□□ -0.32
ECHDC1-209ENST00000454591 DNAJC3Q13217 504 aa13.07□□□□□ -0.32
ECHDC1-209ENST00000454591 SMTNL2Q2TAL5 461 aa13.07□□□□□ -0.32
ECHDC1-209ENST00000454591 KCNT1Q5JUK3 1230 aa13.07□□□□□ -0.32
ECHDC1-209ENST00000454591 FAM102AQ5T9C2 384 aaPredicted RBP13.07□□□□□ -0.32
ECHDC1-209ENST00000454591 FAM91A1Q658Y4 838 aa13.07□□□□□ -0.32
ECHDC1-209ENST00000454591 TRNP1Q6NT89 227 aa13.07□□□□□ -0.32
ECHDC1-209ENST00000454591 LVRNQ6Q4G3 990 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms