RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 FEZF2Q8TBJ5 459 aa11.59□□□□□ -0.55
SCN9A-205ENST00000454569 ZNF653Q96CK0 615 aa11.59□□□□□ -0.55
SCN9A-205ENST00000454569 BTBD6Q96KE9 485 aa11.59□□□□□ -0.55
SCN9A-205ENST00000454569 TGS1Q96RS0 853 aaKnown RBP11.59□□□□□ -0.55
SCN9A-205ENST00000454569 SLC4A5Q9BY07 1137 aa11.59□□□□□ -0.55
SCN9A-205ENST00000454569 ADAM33Q9BZ11 813 aa11.59□□□□□ -0.55
SCN9A-205ENST00000454569 GOLPH3Q9H4A6 298 aa11.59□□□□□ -0.55
SCN9A-205ENST00000454569 CSNK1G1Q9HCP0 422 aa11.59□□□□□ -0.55
SCN9A-205ENST00000454569 ST7Q9NRC1 585 aa11.59□□□□□ -0.55
SCN9A-205ENST00000454569 ADAM22Q9P0K1 906 aa11.59□□□□□ -0.55
SCN9A-205ENST00000454569 HESX1Q9UBX0 185 aa11.59□□□□□ -0.55
SCN9A-205ENST00000454569 GUCA1BQ9UMX6 200 aa11.59□□□□□ -0.55
SCN9A-205ENST00000454569 NOTCH4Q99466 2003 aa11.59□□□□□ -0.55
SCN9A-205ENST00000454569 MACROD2A1Z1Q3 448 aa11.58□□□□□ -0.55
SCN9A-205ENST00000454569 F8VP50 259 aa11.58□□□□□ -0.55
SCN9A-205ENST00000454569 PAPSS1O43252 624 aaPredicted RBP11.58□□□□□ -0.55
SCN9A-205ENST00000454569 MOCS3O95396 460 aa11.58□□□□□ -0.55
SCN9A-205ENST00000454569 CYP1A2P05177 515 aa11.58□□□□□ -0.55
SCN9A-205ENST00000454569 URODP06132 367 aa11.58□□□□□ -0.55
SCN9A-205ENST00000454569 TMEM253P0C7T8 217 aa11.58□□□□□ -0.55
SCN9A-205ENST00000454569 FAM200BP0CF97 657 aa11.58□□□□□ -0.55
SCN9A-205ENST00000454569 LCP1P13796 627 aa11.58□□□□□ -0.55
SCN9A-205ENST00000454569 GABRB2P47870 512 aa11.58□□□□□ -0.55
SCN9A-205ENST00000454569 PGFP49763 221 aa11.58□□□□□ -0.55
SCN9A-205ENST00000454569 BCAT1P54687 386 aa11.58□□□□□ -0.55
SCN9A-205ENST00000454569 ADCY1Q08828 1119 aa11.58□□□□□ -0.55
SCN9A-205ENST00000454569 DUSP4Q13115 394 aa11.58□□□□□ -0.55
SCN9A-205ENST00000454569 STILQ15468 1287 aa11.58□□□□□ -0.55
SCN9A-205ENST00000454569 PLPP4Q5VZY2 271 aa11.58□□□□□ -0.55
SCN9A-205ENST00000454569 TRNP1Q6NT89 227 aa11.58□□□□□ -0.55
SCN9A-205ENST00000454569 FAM183BPQ6ZVS7 135 aa11.58□□□□□ -0.55
SCN9A-205ENST00000454569 TMC7Q7Z402 723 aa11.58□□□□□ -0.55
SCN9A-205ENST00000454569 TMEM110Q86TL2 294 aa11.58□□□□□ -0.55
SCN9A-205ENST00000454569 SPATA2LQ8IUW3 424 aaPredicted RBP11.58□□□□□ -0.55
SCN9A-205ENST00000454569 DCP1BQ8IZD4 617 aaKnown RBP11.58□□□□□ -0.55
SCN9A-205ENST00000454569 JOSD2Q8TAC2 188 aa11.58□□□□□ -0.55
SCN9A-205ENST00000454569 SCAMP5Q8TAC9 235 aa11.58□□□□□ -0.55
SCN9A-205ENST00000454569 SLC35G2Q8TBE7 412 aa11.58□□□□□ -0.55
SCN9A-205ENST00000454569 TCF25Q9BQ70 676 aa11.58□□□□□ -0.55
SCN9A-205ENST00000454569 RXFP1Q9HBX9 757 aa11.58□□□□□ -0.55
SCN9A-205ENST00000454569 CNOT8Q9UFF9 292 aaKnown RBP11.58□□□□□ -0.55
SCN9A-205ENST00000454569 CAPN6Q9Y6Q1 641 aa11.58□□□□□ -0.55
SCN9A-205ENST00000454569 C2orf71A6NGG8 1288 aa11.58□□□□□ -0.56
SCN9A-205ENST00000454569 GOLGA8SH3BPF8 625 aa11.58□□□□□ -0.56
SCN9A-205ENST00000454569 TNFRSF10BO14763 440 aa11.58□□□□□ -0.56
SCN9A-205ENST00000454569 FSCN2O14926 492 aa11.58□□□□□ -0.56
SCN9A-205ENST00000454569 XPO1O14980 1071 aaKnown RBP11.58□□□□□ -0.56
SCN9A-205ENST00000454569 ZSCAN12O43309 604 aa11.58□□□□□ -0.56
SCN9A-205ENST00000454569 ABLIM3O94929 683 aa11.58□□□□□ -0.56
SCN9A-205ENST00000454569 CA8P35219 290 aa11.58□□□□□ -0.56
SCN9A-205ENST00000454569 PLA2G4AP47712 749 aa11.58□□□□□ -0.56
SCN9A-205ENST00000454569 RPL7AP62424 266 aaKnown RBP11.58□□□□□ -0.56
SCN9A-205ENST00000454569 GPC5P78333 572 aa11.58□□□□□ -0.56
SCN9A-205ENST00000454569 OGDHQ02218 1023 aa11.58□□□□□ -0.56
SCN9A-205ENST00000454569 GPM6BQ13491 265 aa11.58□□□□□ -0.56
SCN9A-205ENST00000454569 PTPROQ16827 1216 aa11.58□□□□□ -0.56
SCN9A-205ENST00000454569 CFAP221Q4G0U5 840 aa11.58□□□□□ -0.56
SCN9A-205ENST00000454569 C10orf76Q5T2E6 689 aa11.58□□□□□ -0.56
SCN9A-205ENST00000454569 ZNF662Q6ZS27 426 aa11.58□□□□□ -0.56
SCN9A-205ENST00000454569 SCN4BQ8IWT1 228 aa11.58□□□□□ -0.56
SCN9A-205ENST00000454569 ARNTL2Q8WYA1 636 aa11.58□□□□□ -0.56
SCN9A-205ENST00000454569 SMARCD1Q96GM5 515 aa11.58□□□□□ -0.56
SCN9A-205ENST00000454569 KLHL5Q96PQ7 755 aa11.58□□□□□ -0.56
SCN9A-205ENST00000454569 PLVAPQ9BX97 442 aa11.58□□□□□ -0.56
SCN9A-205ENST00000454569 MIS12Q9H081 205 aa11.58□□□□□ -0.56
SCN9A-205ENST00000454569 MRPL17Q9NRX2 175 aaKnown RBP11.58□□□□□ -0.56
SCN9A-205ENST00000454569 INTUQ9ULD6 942 aa11.58□□□□□ -0.56
SCN9A-205ENST00000454569 PCDHB5Q9Y5E4 795 aa11.58□□□□□ -0.56
SCN9A-205ENST00000454569 NCANO14594 1321 aa11.58□□□□□ -0.56
SCN9A-205ENST00000454569 C5orf42Q9H799 3197 aa11.57□□□□□ -0.56
SCN9A-205ENST00000454569 PRRC2BQ5JSZ5 2229 aaKnown RBP11.57□□□□□ -0.56
SCN9A-205ENST00000454569 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.57□□□□□ -0.56
SCN9A-205ENST00000454569 H3BNC9 293 aa11.57□□□□□ -0.56
SCN9A-205ENST00000454569 CCP110O43303 1012 aa11.57□□□□□ -0.56
SCN9A-205ENST00000454569 GRAP2O75791 330 aa11.57□□□□□ -0.56
SCN9A-205ENST00000454569 IPO7O95373 1038 aaKnown RBP11.57□□□□□ -0.56
SCN9A-205ENST00000454569 SETSIPP0DME0 302 aa11.57□□□□□ -0.56
SCN9A-205ENST00000454569 HAPLN1P10915 354 aaPredicted RBP11.57□□□□□ -0.56
SCN9A-205ENST00000454569 ATF6P18850 670 aa11.57□□□□□ -0.56
SCN9A-205ENST00000454569 GRIK1P39086 918 aa11.57□□□□□ -0.56
SCN9A-205ENST00000454569 USP46P62068 366 aa11.57□□□□□ -0.56
SCN9A-205ENST00000454569 ADIGQ0VDE8 80 aa11.57□□□□□ -0.56
SCN9A-205ENST00000454569 KIF5AQ12840 1032 aa11.57□□□□□ -0.56
SCN9A-205ENST00000454569 MAMLD1Q13495 774 aa11.57□□□□□ -0.56
SCN9A-205ENST00000454569 MTMR3Q13615 1198 aa11.57□□□□□ -0.56
SCN9A-205ENST00000454569 RAB33AQ14088 237 aa11.57□□□□□ -0.56
SCN9A-205ENST00000454569 RAB6CQ53S08 254 aa11.57□□□□□ -0.56
SCN9A-205ENST00000454569 RAB41Q5JT25 222 aa11.57□□□□□ -0.56
SCN9A-205ENST00000454569 DAB2IPQ5VWQ8 1189 aa11.57□□□□□ -0.56
SCN9A-205ENST00000454569 PLEKHA7Q6IQ23 1121 aa11.57□□□□□ -0.56
SCN9A-205ENST00000454569 C4orf50Q6ZRC1 276 aa11.57□□□□□ -0.56
SCN9A-205ENST00000454569 HFE2Q6ZVN8 426 aa11.57□□□□□ -0.56
SCN9A-205ENST00000454569 BHLHA9Q7RTU4 235 aa11.57□□□□□ -0.56
SCN9A-205ENST00000454569 ADGRD2Q7Z7M1 963 aa11.57□□□□□ -0.56
SCN9A-205ENST00000454569 MRPL43Q8N983 215 aaKnown RBP11.57□□□□□ -0.56
SCN9A-205ENST00000454569 GDPD5Q8WTR4 605 aa11.57□□□□□ -0.56
SCN9A-205ENST00000454569 STK32AQ8WU08 396 aa11.57□□□□□ -0.56
SCN9A-205ENST00000454569 C18orf8Q96DM3 657 aa11.57□□□□□ -0.56
SCN9A-205ENST00000454569 MCRS1Q96EZ8 462 aa11.57□□□□□ -0.56
SCN9A-205ENST00000454569 NUP85Q9BW27 656 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms