RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 SMC3Q9UQE7 1217 aa6.41□□□□□ -1.38
HLA-DPA3-207ENST00000454398 NUMA1Q14980 2115 aa6.4□□□□□ -1.38
HLA-DPA3-207ENST00000454398 SRRM3A6NNA2 597 aaPredicted RBP6.4□□□□□ -1.38
HLA-DPA3-207ENST00000454398 TAF4O00268 1085 aa6.4□□□□□ -1.38
HLA-DPA3-207ENST00000454398 KHNYNO15037 678 aaKnown RBP6.4□□□□□ -1.38
HLA-DPA3-207ENST00000454398 FOXD2O60548 495 aaPredicted RBP6.4□□□□□ -1.38
HLA-DPA3-207ENST00000454398 RHOBTB1O94844 696 aa6.4□□□□□ -1.38
HLA-DPA3-207ENST00000454398 KAT7O95251 611 aa6.4□□□□□ -1.38
HLA-DPA3-207ENST00000454398 NFATC1O95644 943 aa6.4□□□□□ -1.38
HLA-DPA3-207ENST00000454398 DLATP10515 647 aaKnown RBP6.4□□□□□ -1.38
HLA-DPA3-207ENST00000454398 ADH5P11766 374 aa6.4□□□□□ -1.38
HLA-DPA3-207ENST00000454398 ENGP17813 658 aa6.4□□□□□ -1.38
HLA-DPA3-207ENST00000454398 HDCP19113 662 aa6.4□□□□□ -1.38
HLA-DPA3-207ENST00000454398 PCSK1P29120 753 aa6.4□□□□□ -1.38
HLA-DPA3-207ENST00000454398 CASP1P29466 404 aa6.4□□□□□ -1.38
HLA-DPA3-207ENST00000454398 LONP1P36776 959 aaKnown RBP6.4□□□□□ -1.38
HLA-DPA3-207ENST00000454398 GRIK1P39086 918 aa6.4□□□□□ -1.38
HLA-DPA3-207ENST00000454398 PNPLA4P41247 253 aa6.4□□□□□ -1.38
HLA-DPA3-207ENST00000454398 STAT6P42226 847 aa6.4□□□□□ -1.38
HLA-DPA3-207ENST00000454398 CYP2J2P51589 502 aa6.4□□□□□ -1.38
HLA-DPA3-207ENST00000454398 ACAP1Q15027 740 aa6.4□□□□□ -1.38
HLA-DPA3-207ENST00000454398 PTPAQ15257 358 aa6.4□□□□□ -1.38
HLA-DPA3-207ENST00000454398 RABEP1Q15276 862 aa6.4□□□□□ -1.38
HLA-DPA3-207ENST00000454398 DHCR24Q15392 516 aa6.4□□□□□ -1.38
HLA-DPA3-207ENST00000454398 CRY1Q16526 586 aa6.4□□□□□ -1.38
HLA-DPA3-207ENST00000454398 CFAP221Q4G0U5 840 aa6.4□□□□□ -1.38
HLA-DPA3-207ENST00000454398 FBXO43Q4G163 708 aa6.4□□□□□ -1.38
HLA-DPA3-207ENST00000454398 USP39Q53GS9 565 aaKnown RBP6.4□□□□□ -1.38
HLA-DPA3-207ENST00000454398 SLFN12LQ6IEE8 588 aa6.4□□□□□ -1.38
HLA-DPA3-207ENST00000454398 HS2ST1Q7LGA3 356 aa6.4□□□□□ -1.38
HLA-DPA3-207ENST00000454398 RASSF3Q86WH2 238 aa6.4□□□□□ -1.38
HLA-DPA3-207ENST00000454398 PGBD3Q8N328 593 aa6.4□□□□□ -1.38
HLA-DPA3-207ENST00000454398 LRRC52Q8N7C0 313 aa6.4□□□□□ -1.38
HLA-DPA3-207ENST00000454398 HPDLQ96IR7 371 aa6.4□□□□□ -1.38
HLA-DPA3-207ENST00000454398 MYRFLQ96LU7 910 aa6.4□□□□□ -1.38
HLA-DPA3-207ENST00000454398 CAMK1GQ96NX5 476 aa6.4□□□□□ -1.38
HLA-DPA3-207ENST00000454398 ACCSQ96QU6 501 aa6.4□□□□□ -1.38
HLA-DPA3-207ENST00000454398 MMS19Q96T76 1030 aa6.4□□□□□ -1.38
HLA-DPA3-207ENST00000454398 ACBD6Q9BR61 282 aa6.4□□□□□ -1.38
HLA-DPA3-207ENST00000454398 RNF38Q9H0F5 515 aa6.4□□□□□ -1.38
HLA-DPA3-207ENST00000454398 GZF1Q9H116 711 aaPredicted RBP6.4□□□□□ -1.38
HLA-DPA3-207ENST00000454398 SMYD3Q9H7B4 428 aa6.4□□□□□ -1.38
HLA-DPA3-207ENST00000454398 CCSER2Q9H7U1 834 aa6.4□□□□□ -1.38
HLA-DPA3-207ENST00000454398 ARHGEF4Q9NR80 690 aa6.4□□□□□ -1.38
HLA-DPA3-207ENST00000454398 KRT82Q9NSB4 513 aa6.4□□□□□ -1.38
HLA-DPA3-207ENST00000454398 FOXD4L1Q9NU39 408 aa6.4□□□□□ -1.38
HLA-DPA3-207ENST00000454398 GMIPQ9P107 970 aa6.4□□□□□ -1.38
HLA-DPA3-207ENST00000454398 CALCOCO1Q9P1Z2 691 aa6.4□□□□□ -1.38
HLA-DPA3-207ENST00000454398 UXTQ9UBK9 157 aaPredicted RBP6.4□□□□□ -1.38
HLA-DPA3-207ENST00000454398 HMGXB4Q9UGU5 601 aa6.4□□□□□ -1.38
HLA-DPA3-207ENST00000454398 EBF1Q9UH73 591 aa6.4□□□□□ -1.38
HLA-DPA3-207ENST00000454398 KIF3AQ9Y496 699 aa6.4□□□□□ -1.38
HLA-DPA3-207ENST00000454398 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.4□□□□□ -1.38
HLA-DPA3-207ENST00000454398 RAD54BQ9Y620 910 aa6.4□□□□□ -1.38
HLA-DPA3-207ENST00000454398 MYH10P35580 1976 aa6.4□□□□□ -1.39
HLA-DPA3-207ENST00000454398 GOLGA4Q13439 2230 aaKnown RBP6.4□□□□□ -1.39
HLA-DPA3-207ENST00000454398 FLNBO75369 2602 aaKnown RBP6.39□□□□□ -1.39
HLA-DPA3-207ENST00000454398 ZNF840PA6NDX5 716 aa6.39□□□□□ -1.39
HLA-DPA3-207ENST00000454398 GABRDO14764 452 aa6.39□□□□□ -1.39
HLA-DPA3-207ENST00000454398 MAP3K13O43283 966 aa6.39□□□□□ -1.39
HLA-DPA3-207ENST00000454398 COCHO43405 550 aa6.39□□□□□ -1.39
HLA-DPA3-207ENST00000454398 OAS1P00973 400 aaKnown RBP6.39□□□□□ -1.39
HLA-DPA3-207ENST00000454398 CAPNS1P04632 268 aa6.39□□□□□ -1.39
HLA-DPA3-207ENST00000454398 MBL2P11226 248 aaPredicted RBP6.39□□□□□ -1.39
HLA-DPA3-207ENST00000454398 CCDC130P13994 396 aa6.39□□□□□ -1.39
HLA-DPA3-207ENST00000454398 GABRG2P18507 467 aa6.39□□□□□ -1.39
HLA-DPA3-207ENST00000454398 ANXA13P27216 316 aa6.39□□□□□ -1.39
HLA-DPA3-207ENST00000454398 HOXD13P35453 343 aa6.39□□□□□ -1.39
HLA-DPA3-207ENST00000454398 P2RY2P41231 377 aa6.39□□□□□ -1.39
HLA-DPA3-207ENST00000454398 KIR2DL1P43626 348 aaPredicted RBP6.39□□□□□ -1.39
HLA-DPA3-207ENST00000454398 CASP4P49662 377 aa6.39□□□□□ -1.39
HLA-DPA3-207ENST00000454398 RPL6Q02878 288 aaKnown RBP6.39□□□□□ -1.39
HLA-DPA3-207ENST00000454398 RING1Q06587 406 aa6.39□□□□□ -1.39
HLA-DPA3-207ENST00000454398 SMARCB1Q12824 385 aa6.39□□□□□ -1.39
HLA-DPA3-207ENST00000454398 TAF10Q12962 218 aa6.39□□□□□ -1.39
HLA-DPA3-207ENST00000454398 MAP7D1Q3KQU3 841 aa6.39□□□□□ -1.39
HLA-DPA3-207ENST00000454398 LY6G5CQ5SRR4 150 aa6.39□□□□□ -1.39
HLA-DPA3-207ENST00000454398 C10orf76Q5T2E6 689 aa6.39□□□□□ -1.39
HLA-DPA3-207ENST00000454398 DAB2IPQ5VWQ8 1189 aa6.39□□□□□ -1.39
HLA-DPA3-207ENST00000454398 LYSMD4Q5XG99 296 aa6.39□□□□□ -1.39
HLA-DPA3-207ENST00000454398 EGFLAMQ63HQ2 1017 aa6.39□□□□□ -1.39
HLA-DPA3-207ENST00000454398 LARP1BQ659C4 914 aaKnown RBP6.39□□□□□ -1.39
HLA-DPA3-207ENST00000454398 DENND5BQ6ZUT9 1274 aa6.39□□□□□ -1.39
HLA-DPA3-207ENST00000454398 MARCH9Q86YJ5 346 aa6.39□□□□□ -1.39
HLA-DPA3-207ENST00000454398 BBS7Q8IWZ6 715 aa6.39□□□□□ -1.39
HLA-DPA3-207ENST00000454398 NELFCDQ8IXH7 590 aa6.39□□□□□ -1.39
HLA-DPA3-207ENST00000454398 TMEM86AQ8N2M4 240 aa6.39□□□□□ -1.39
HLA-DPA3-207ENST00000454398 GPD1LQ8N335 351 aa6.39□□□□□ -1.39
HLA-DPA3-207ENST00000454398 PHTF2Q8N3S3 785 aa6.39□□□□□ -1.39
HLA-DPA3-207ENST00000454398 TOP6BLQ8N6T0 577 aa6.39□□□□□ -1.39
HLA-DPA3-207ENST00000454398 RDH13Q8NBN7 331 aa6.39□□□□□ -1.39
HLA-DPA3-207ENST00000454398 SCAMP5Q8TAC9 235 aa6.39□□□□□ -1.39
HLA-DPA3-207ENST00000454398 OLIG1Q8TAK6 271 aa6.39□□□□□ -1.39
HLA-DPA3-207ENST00000454398 SPATA18Q8TC71 538 aa6.39□□□□□ -1.39
HLA-DPA3-207ENST00000454398 WHAMMQ8TF30 809 aa6.39□□□□□ -1.39
HLA-DPA3-207ENST00000454398 CCDC127Q96BQ5 260 aa6.39□□□□□ -1.39
HLA-DPA3-207ENST00000454398 HVCN1Q96D96 273 aa6.39□□□□□ -1.39
HLA-DPA3-207ENST00000454398 ZFRQ96KR1 1074 aaKnown RBP6.39□□□□□ -1.39
HLA-DPA3-207ENST00000454398 SPACA7Q96KW9 195 aa6.39□□□□□ -1.39
HLA-DPA3-207ENST00000454398 TSPAN18Q96SJ8 248 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms