RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 DRAP1Q14919 205 aaPredicted RBP29.57■■■□□ 2.32
SMARCC1-203ENST00000454240 FILIP1LQ4L180 1135 aa29.57■■■□□ 2.32
SMARCC1-203ENST00000454240 FAM78AQ5JUQ0 283 aa29.57■■■□□ 2.32
SMARCC1-203ENST00000454240 PARM1Q6UWI2 310 aa29.57■■■□□ 2.32
SMARCC1-203ENST00000454240 MTSS1LQ765P7 747 aa29.57■■■□□ 2.32
SMARCC1-203ENST00000454240 FAM71AQ8IYT1 594 aa29.57■■■□□ 2.32
SMARCC1-203ENST00000454240 FGF14Q92915 247 aa29.57■■■□□ 2.32
SMARCC1-203ENST00000454240 KHSRPQ92945 711 aaKnown RBP eCLIP29.57■■■□□ 2.322e-6■■□□□ 14.5
SMARCC1-203ENST00000454240 NAP1L5Q96NT1 182 aaPredicted RBP29.57■■■□□ 2.32
SMARCC1-203ENST00000454240 STK33Q9BYT3 514 aa29.57■■■□□ 2.32
SMARCC1-203ENST00000454240 FAM207AQ9NSI2 230 aaPredicted RBP29.57■■■□□ 2.32
SMARCC1-203ENST00000454240 ZMYM5Q9UJ78 669 aa29.57■■■□□ 2.32
SMARCC1-203ENST00000454240 DAAM1Q9Y4D1 1078 aa29.57■■■□□ 2.32
SMARCC1-203ENST00000454240 MYO16Q9Y6X6 1858 aa29.57■■■□□ 2.32
SMARCC1-203ENST00000454240 DDX6P26196 483 aaKnown RBP eCLIP29.56■■■□□ 2.32
SMARCC1-203ENST00000454240 PPP3CCP48454 512 aa29.56■■■□□ 2.32
SMARCC1-203ENST00000454240 SLC8A3P57103 927 aa29.56■■■□□ 2.32
SMARCC1-203ENST00000454240 PDE4CQ08493 712 aa29.56■■■□□ 2.32
SMARCC1-203ENST00000454240 RAPGEF1Q13905 1077 aa29.56■■■□□ 2.32
SMARCC1-203ENST00000454240 GPRIN1Q7Z2K8 1008 aa29.56■■■□□ 2.32
SMARCC1-203ENST00000454240 ZSCAN18Q8TBC5 510 aaPredicted RBP29.56■■■□□ 2.32
SMARCC1-203ENST00000454240 RSAD2Q8WXG1 361 aa29.56■■■□□ 2.32
SMARCC1-203ENST00000454240 MRPS31Q92665 395 aaKnown RBP29.56■■■□□ 2.32
SMARCC1-203ENST00000454240 SLITRK1Q96PX8 696 aa29.56■■■□□ 2.32
SMARCC1-203ENST00000454240 SLC46A2Q9BY10 475 aa29.56■■■□□ 2.32
SMARCC1-203ENST00000454240 SLITRK6Q9H5Y7 841 aa29.56■■■□□ 2.32
SMARCC1-203ENST00000454240 TRPV4Q9HBA0 871 aa29.56■■■□□ 2.32
SMARCC1-203ENST00000454240 ACP6Q9NPH0 428 aa29.56■■■□□ 2.32
SMARCC1-203ENST00000454240 MUTYHQ9UIF7 546 aa29.56■■■□□ 2.32
SMARCC1-203ENST00000454240 NUMBLQ9Y6R0 609 aa29.56■■■□□ 2.32
SMARCC1-203ENST00000454240 EPHB6O15197 1021 aa29.55■■■□□ 2.32
SMARCC1-203ENST00000454240 CYP26A1O43174 497 aa29.55■■■□□ 2.32
SMARCC1-203ENST00000454240 SERPINC1P01008 464 aa29.55■■■□□ 2.32
SMARCC1-203ENST00000454240 FCARP24071 287 aa29.55■■■□□ 2.32
SMARCC1-203ENST00000454240 WEE1P30291 646 aa29.55■■■□□ 2.32
SMARCC1-203ENST00000454240 GNA15P30679 374 aa29.55■■■□□ 2.32
SMARCC1-203ENST00000454240 BST2Q10589 180 aaKnown RBP29.55■■■□□ 2.32
SMARCC1-203ENST00000454240 IFRD2Q12894 506 aaPredicted RBP29.55■■■□□ 2.32
SMARCC1-203ENST00000454240 PTPN21Q16825 1174 aa29.55■■■□□ 2.32
SMARCC1-203ENST00000454240 MON1AQ86VX9 555 aa29.55■■■□□ 2.32
SMARCC1-203ENST00000454240 ST13P5Q8NFI4 369 aaPredicted RBP29.55■■■□□ 2.32
SMARCC1-203ENST00000454240 UBA3Q8TBC4 463 aa29.55■■■□□ 2.32
SMARCC1-203ENST00000454240 ZNF606Q8WXB4 792 aa29.55■■■□□ 2.32
SMARCC1-203ENST00000454240 OVCA2Q8WZ82 227 aa29.55■■■□□ 2.32
SMARCC1-203ENST00000454240 SMARCD2Q92925 531 aa29.55■■■□□ 2.32
SMARCC1-203ENST00000454240 FBXO44Q9H4M3 255 aa29.55■■■□□ 2.32
SMARCC1-203ENST00000454240 TRPM5Q9NZQ8 1165 aa29.55■■■□□ 2.32
SMARCC1-203ENST00000454240 NCANO14594 1321 aa29.54■■■□□ 2.32
SMARCC1-203ENST00000454240 ZNF840PA6NDX5 716 aa29.54■■■□□ 2.32
SMARCC1-203ENST00000454240 XPO1O14980 1071 aaKnown RBP29.54■■■□□ 2.32
SMARCC1-203ENST00000454240 PNMA6AP0CW24 399 aaPredicted RBP29.54■■■□□ 2.32
SMARCC1-203ENST00000454240 CLCN1P35523 988 aa29.54■■■□□ 2.32
SMARCC1-203ENST00000454240 KIF11P52732 1056 aa29.54■■■□□ 2.32
SMARCC1-203ENST00000454240 POLR2FP61218 127 aaKnown RBP29.54■■■□□ 2.32
SMARCC1-203ENST00000454240 FANCCQ00597 558 aa29.54■■■□□ 2.32
SMARCC1-203ENST00000454240 NR1I3Q14994 352 aa29.54■■■□□ 2.32
SMARCC1-203ENST00000454240 TXNDC8Q6A555 127 aa29.54■■■□□ 2.32
SMARCC1-203ENST00000454240 PIGZQ86VD9 579 aa29.54■■■□□ 2.32
SMARCC1-203ENST00000454240 NEK11Q8NG66 645 aa29.54■■■□□ 2.32
SMARCC1-203ENST00000454240 FBXO32Q969P5 355 aa29.54■■■□□ 2.32
SMARCC1-203ENST00000454240 PCMTD1Q96MG8 357 aaPredicted RBP29.54■■■□□ 2.32
SMARCC1-203ENST00000454240 RPP25Q9BUL9 199 aaKnown RBP29.54■■■□□ 2.32
SMARCC1-203ENST00000454240 SORCS3Q9UPU3 1222 aa29.54■■■□□ 2.32
SMARCC1-203ENST00000454240 USP3Q9Y6I4 520 aa29.54■■■□□ 2.32
SMARCC1-203ENST00000454240 TULP2O00295 520 aa29.53■■■□□ 2.32
SMARCC1-203ENST00000454240 ECI2O75521 394 aa29.53■■■□□ 2.32
SMARCC1-203ENST00000454240 SETSIPP0DME0 302 aa29.53■■■□□ 2.32
SMARCC1-203ENST00000454240 PTK2Q05397 1052 aa29.53■■■□□ 2.32
SMARCC1-203ENST00000454240 RAB41Q5JT25 222 aa29.53■■■□□ 2.32
SMARCC1-203ENST00000454240 TANGO2Q6ICL3 276 aa29.53■■■□□ 2.32
SMARCC1-203ENST00000454240 ARID3BQ8IVW6 561 aaPredicted RBP29.53■■■□□ 2.32
SMARCC1-203ENST00000454240 SLC44A3Q8N4M1 653 aa29.53■■■□□ 2.32
SMARCC1-203ENST00000454240 MAB21L3Q8N8X9 362 aa29.53■■■□□ 2.32
SMARCC1-203ENST00000454240 PDZD8Q8NEN9 1154 aa29.53■■■□□ 2.32
SMARCC1-203ENST00000454240 ELSPBP1Q96BH3 223 aa29.53■■■□□ 2.32
SMARCC1-203ENST00000454240 ZFP14Q9HCL3 533 aa29.53■■■□□ 2.32
SMARCC1-203ENST00000454240 SCML2Q9UQR0 700 aa29.53■■■□□ 2.32
SMARCC1-203ENST00000454240 F8VZ95 297 aa29.52■■■□□ 2.32
SMARCC1-203ENST00000454240 THAP12O43422 761 aa29.52■■■□□ 2.32
SMARCC1-203ENST00000454240 MED7O43513 233 aa29.52■■■□□ 2.32
SMARCC1-203ENST00000454240 PLA2G4AP47712 749 aa29.52■■■□□ 2.32
SMARCC1-203ENST00000454240 TDGQ13569 410 aa29.52■■■□□ 2.32
SMARCC1-203ENST00000454240 MEA1Q16626 185 aa29.52■■■□□ 2.32
SMARCC1-203ENST00000454240 SNX30Q5VWJ9 437 aa29.52■■■□□ 2.32
SMARCC1-203ENST00000454240 CMTM8Q8IZV2 173 aa29.52■■■□□ 2.32
SMARCC1-203ENST00000454240 SLC35F5Q8WV83 523 aa29.52■■■□□ 2.32
SMARCC1-203ENST00000454240 CHORDC1Q9UHD1 332 aaPredicted RBP29.52■■■□□ 2.32
SMARCC1-203ENST00000454240 A0A1W2PQC6 194 aa29.51■■■□□ 2.31
SMARCC1-203ENST00000454240 M0QYV0 167 aa29.51■■■□□ 2.31
SMARCC1-203ENST00000454240 ZDHHC11BP0C7U3 371 aa29.51■■■□□ 2.31
SMARCC1-203ENST00000454240 JAM2P57087 298 aa29.51■■■□□ 2.31
SMARCC1-203ENST00000454240 KXD1Q9BQD3 176 aa29.51■■■□□ 2.31
SMARCC1-203ENST00000454240 NLRC4Q9NPP4 1024 aa29.51■■■□□ 2.31
SMARCC1-203ENST00000454240 HELZP42694 1942 aaKnown RBP29.5■■■□□ 2.31
SMARCC1-203ENST00000454240 C2orf78A6NCI8 922 aa29.5■■■□□ 2.31
SMARCC1-203ENST00000454240 DLL1O00548 723 aa29.5■■■□□ 2.31
SMARCC1-203ENST00000454240 DCXO43602 365 aa29.5■■■□□ 2.31
SMARCC1-203ENST00000454240 PFKLP17858 780 aa29.5■■■□□ 2.31
SMARCC1-203ENST00000454240 BPIFB4P59827 614 aa29.5■■■□□ 2.31
SMARCC1-203ENST00000454240 SLC47A2Q86VL8 602 aa29.5■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms